CSPI04G12000 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G12000
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGag/pol protein
LocationChr4: 10323123 .. 10326980 (+)
RNA-Seq ExpressionCSPI04G12000
SyntenyCSPI04G12000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACAGCCTCGAAAGAAACTACCCAGCTCAGAACAATGTCAAAGGTCTCAGAAGTTCGGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACTTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTTACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACCAAAGCTGGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAGGGAAAGACTCCCAAACAGAACAAGGGTAAGAAAGGTGCAGAAAAAGGTAAGTGTTACCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAGGCAGAGAAGGAAACACAAGGTAAATATGATTTACTAGTTGTAGAAACATGTTTAGTGGAATATGAAAATTGTACCTGGATACTAGATTCAGGAGCCACTAACCATATTTGCTTCTCATTTCAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGATCACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCAGTGGGAGATTTAAAGTTGTTTTTTAGAGATAGATATGTCATACTTAAGAATGTCTTATATGTACCTCAAATGAAAAGAAATTTAATATCTATCTCTTGTATTTTGGAACAAATGTATAGAATATCTTTTGAAATTAATGAAGCGTTCGTTTTCTATAAAGGTATTCTAGTTTGTTCTGCTATACTTGAAGACAACTTATATAAGTTAAGACCAACTAGAGCAAATTTTGTCTTAAATACTGAAATATTCAGAACAGCTGAAACTCAGAATAAAAGACAAAAAGTTTCTTCTAATGCCTATTTATGGCACTTAAGACTTGGTCACATAAATCTCAATAGGATTGGGAGATTGGTTAAAAGTGGGCTTCTAAGTCCGTTAGAAGATAACTCTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAATAGTCTTGAAAAGTTCAAAGAATATAAGGCTGAAGTAGAAAACGAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACAGAACGGTGTATCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATGAGTTTTTCTCAGATGTCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTCATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCACATCAGGGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATCGCTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTCAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTACAAGCATGTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTATAGCATTTTTAGTCTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATGTTGTCTAGATATAAAATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGTACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAAGAGCAGTAGTTTGGAGAAGCATAAAGCAAATTTGTATAGTTGACTCCACAATGGAAGCTGAATACGTAGCGACTTGTGAAGCAGCCAAAGAACCAGTATGGCAAAGAAAATTCTTGACAGATTTGGAAGTCGTTCCAAATATGCATCTACCAATAACTTTATATTGTGACAACAGTGGTGCAGTTGCAAATTCAAGAGAACCTAGAAGCCATAAAAGAGGAAAGCATATTGAACGCAAGTACCATCTTATCAGGGAAATTGTACATCGTGGTGACGTTGTAGTAACCCAGATTTCTTCTCAGCAAAACATTGCTGATCCTTTTACAAAAGCCCTCACGGCTAAAGTGTTTGAGGGTCACCTACACAATTTAGGTCTACGATGTTTGTAA

mRNA sequence

ATGCCACAGCCTCGAAAGAAACTACCCAGCTCAGAACAATGTCAAAGGTCTCAGAAGTTCGGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACTTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTTACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACCAAAGCTGGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAGGGAAAGACTCCCAAACAGAACAAGGGTAAGAAAGGTGCAGAAAAAGGTAAGTGTTACCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAGGCAGAGAAGGAAACACAAGGTAAATATGATTTACTAGTTGTAGAAACATGTTTAGTGGAATATGAAAATTGTACCTGGATACTAGATTCAGGAGCCACTAACCATATTTGCTTCTCATTTCAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGATCACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCAGTGGGAGATTTAAAGTTGTTTTTTAGAGATAGATATGTCATACTTAAGAATGTCTTATATGTACCTCAAATGAAAAGAAATTTAATATCTATCTCTTGTATTTTGGAACAAATGTATAGAATATCTTTTGAAATTAATGAAGCGTTCGTTTTCTATAAAGGTATTCTAGTTTGTTCTGCTATACTTGAAGACAACTTATATAAGTTAAGACCAACTAGAGCAAATTTTGTCTTAAATACTGAAATATTCAGAACAGCTGAAACTCAGAATAAAAGACAAAAAGTTTCTTCTAATGCCTATTTATGGCACTTAAGACTTGGTCACATAAATCTCAATAGGATTGGGAGATTGGTTAAAAGTGGGCTTCTAAGTCCGTTAGAAGATAACTCTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAATAGTCTTGAAAAGTTCAAAGAATATAAGGCTGAAGTAGAAAACGAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACAGAACGGTGTATCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATGAGTTTTTCTCAGATGTCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTCATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCACATCAGGGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATCGCTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTCAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTACAAGCATGTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTATAGCATTTTTAGTCTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATGTTGTCTAGATATAAAATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGTACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAAGAGCAGTAGTTTGGAGAAGCATAAAGCAAATTTGTATAGTTGACTCCACAATGGAAGCTGAATACGTAGCGACTTGTGAAGCAGCCAAAGAACCAGTATGGCAAAGAAAATTCTTGACAGATTTGGAAGTCGTTCCAAATATGCATCTACCAATAACTTTATATTGTGACAACAGTGGTGCAGTTGCAAATTCAAGAGAACCTAGAAGCCATAAAAGAGGAAAGCATATTGAACGCAAGTACCATCTTATCAGGGAAATTGTACATCGTGGTGACGTTGTAGTAACCCAGATTTCTTCTCAGCAAAACATTGCTGATCCTTTTACAAAAGCCCTCACGGCTAAAGTGTTTGAGGGTCACCTACACAATTTAGGTCTACGATGTTTGTAA

Coding sequence (CDS)

ATGCCACAGCCTCGAAAGAAACTACCCAGCTCAGAACAATGTCAAAGGTCTCAGAAGTTCGGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACTTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTTACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACCAAAGCTGGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAGGGAAAGACTCCCAAACAGAACAAGGGTAAGAAAGGTGCAGAAAAAGGTAAGTGTTACCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAGGCAGAGAAGGAAACACAAGGTAAATATGATTTACTAGTTGTAGAAACATGTTTAGTGGAATATGAAAATTGTACCTGGATACTAGATTCAGGAGCCACTAACCATATTTGCTTCTCATTTCAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGATCACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCAGTGGGAGATTTAAAGTTGTTTTTTAGAGATAGATATGTCATACTTAAGAATGTCTTATATGTACCTCAAATGAAAAGAAATTTAATATCTATCTCTTGTATTTTGGAACAAATGTATAGAATATCTTTTGAAATTAATGAAGCGTTCGTTTTCTATAAAGGTATTCTAGTTTGTTCTGCTATACTTGAAGACAACTTATATAAGTTAAGACCAACTAGAGCAAATTTTGTCTTAAATACTGAAATATTCAGAACAGCTGAAACTCAGAATAAAAGACAAAAAGTTTCTTCTAATGCCTATTTATGGCACTTAAGACTTGGTCACATAAATCTCAATAGGATTGGGAGATTGGTTAAAAGTGGGCTTCTAAGTCCGTTAGAAGATAACTCTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAATAGTCTTGAAAAGTTCAAAGAATATAAGGCTGAAGTAGAAAACGAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACAGAACGGTGTATCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATGAGTTTTTCTCAGATGTCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTCATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCACATCAGGGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATCGCTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTCAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTACAAGCATGTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTATAGCATTTTTAGTCTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATGTTGTCTAGATATAAAATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGTACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAAGAGCAGTAGTTTGGAGAAGCATAAAGCAAATTTGTATAGTTGACTCCACAATGGAAGCTGAATACGTAGCGACTTGTGAAGCAGCCAAAGAACCAGTATGGCAAAGAAAATTCTTGACAGATTTGGAAGTCGTTCCAAATATGCATCTACCAATAACTTTATATTGTGACAACAGTGGTGCAGTTGCAAATTCAAGAGAACCTAGAAGCCATAAAAGAGGAAAGCATATTGAACGCAAGTACCATCTTATCAGGGAAATTGTACATCGTGGTGACGTTGTAGTAACCCAGATTTCTTCTCAGCAAAACATTGCTGATCCTTTTACAAAAGCCCTCACGGCTAAAGTGTTTGAGGGTCACCTACACAATTTAGGTCTACGATGTTTGTAA

Protein sequence

MPQPRKKLPSSEQCQRSQKFGIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTKALTAKVFEGHLHNLGLRCL*
Homology
BLAST of CSPI04G12000 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.1e-208
Identity = 459/1308 (35.09%), Postives = 708/1308 (54.13%), Query Frame = 0

Query: 25   NEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMKEG 84
            +E+A   I   +SD +        TA+ I   L  ++     + +    K +Y   M EG
Sbjct: 56   DERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEG 115

Query: 85   TSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNL--- 144
            T+   H+             G  IEE ++   +L SLP S+    T     K    L   
Sbjct: 116  TNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDV 175

Query: 145  --TTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGK 204
                LLNE  R +    G+    E       R + R S++  ++G     A+ K K + K
Sbjct: 176  TSALLLNEKMRKKPENQGQALITEGR----GRSYQRSSNNYGRSG-----ARGKSKNRSK 235

Query: 205  TPKQNKGKKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYD-----LLV----- 264
            +  +N          CY+C Q GH+ R+CP     +K + ET G+ +      +V     
Sbjct: 236  SRVRN----------CYNCNQPGHFKRDCPN---PRKGKGETSGQKNDDNTAAMVQNNDN 295

Query: 265  VETCLVEYENC--------TWILDSGATNHICFSFQENSSWKKLSEGEI-TLKVGTGEMV 324
            V   + E E C         W++D+ A++H   +      + +   G+  T+K+G     
Sbjct: 296  VVLFINEEEECMHLSGPESEWVVDTAASHH---ATPVRDLFCRYVAGDFGTVKMGNTSYS 355

Query: 325  SASAVGDLKLFFR-DRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKG- 384
              + +GD+ +       ++LK+V +VP ++ NLIS   +    Y  S+  N+ +   KG 
Sbjct: 356  KIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYE-SYFANQKWRLTKGS 415

Query: 385  ILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRI 444
            +++   +    LY+          N EI +  E    + ++S +  LWH R+GH++   +
Sbjct: 416  LVIAKGVARGTLYR---------TNAEICQ-GELNAAQDEISVD--LWHKRMGHMSEKGL 475

Query: 445  GRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKAR 504
              L K  L+S  +  ++ PC+ CL GK  + SF     R    L+LV+SD+CGPM +++ 
Sbjct: 476  QILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESM 535

Query: 505  GGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMD 564
            GG +YF++FIDD SR   +Y++  K    + F+++ A VE E G+ +K LRSD GGEY  
Sbjct: 536  GGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTS 595

Query: 565  LRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETA 624
              F +Y   +GI+ + + P TPQ NGV+ER NRT+++ VRSM+  +++  SFWG A++TA
Sbjct: 596  REFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTA 655

Query: 625  AYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHVLVQNPKKLEHRSKLCFFI 684
             Y++N  PS  ++ E P  +W  ++ S  H +++GC   AHV  +   KL+ +S  C FI
Sbjct: 656  CYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFI 715

Query: 685  GYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI------SKSAIDK 744
            GY  E  G   +DP + K+  S +  F  E  +R     S+ V   I        S  + 
Sbjct: 716  GYGDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNN 775

Query: 745  PSSSTKVVDKTRKSGQ-------------------SHPSQ---QLREPRRSGRVVHQPDR 804
            P+S+    D+  + G+                    HP+Q   Q +  RRS R   +  R
Sbjct: 776  PTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRR 835

Query: 805  YLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDV 864
            Y       V+I DD   +P + K+ +   +++Q +KAM  EMES+  N  + LV+ P   
Sbjct: 836  YPS--TEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGK 895

Query: 865  KPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAT 924
            +P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D++E FSPV  + SIR +LS+A 
Sbjct: 896  RPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAA 955

Query: 925  FYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLQACSRSWNI 984
              D E+ Q+DVKTAFL+G+LEE IYM QPEGF    ++  VCKL KS+YGL+   R W +
Sbjct: 956  SLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYM 1015

Query: 985  RFDTAIKSYGFEQNVDEPCVY-KKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQ 1044
            +FD+ +KS  + +   +PCVY K+   +    L+LYVDD+L++G D G +  +K  L+  
Sbjct: 1016 KFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKS 1075

Query: 1045 FQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLS 1104
            F MKDLG AQ +LG++IVR R ++ L +SQ  YI+++L R+ M+N+K    P    + LS
Sbjct: 1076 FDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLS 1135

Query: 1105 KEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVK 1164
            K+ CP T +E  +M  +PY+SAVGSLMYAM+CTRPDI ++VG+VSR+  NPG++HW AVK
Sbjct: 1136 KKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVK 1195

Query: 1165 NILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGRAVVWRSIKQ 1224
             IL+YLR T    L +G  D IL GYTD+D   D D RKS++G +FT +G A+ W+S  Q
Sbjct: 1196 WILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQ 1255

Query: 1225 ICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRS 1275
             C+  ST EAEY+A  E  KE +W ++FL +L +    ++   +YCD+  A+  S+    
Sbjct: 1256 KCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV---VYCDSQSAIDLSKNSMY 1315

BLAST of CSPI04G12000 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 520.8 bits (1340), Expect = 4.5e-146
Identity = 392/1409 (27.82%), Postives = 666/1409 (47.27%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KA   A+  I+  +SD       S  TA++I+++L  ++ +   + +    K + + ++ 
Sbjct: 50   KAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLS 109

Query: 83   EGTSVRE--HVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSF----IPFQTNASLN- 142
               S+    H+ D ++   +A   G  IEE++++S +L +LP  +       +T +  N 
Sbjct: 110  SEMSLLSHFHIFDELISELLAA--GAKIEEMDKISHLLITLPSCYDGIITAIETLSEENL 169

Query: 143  KIEFNLTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKK 202
             + F    LL++  + +N      K+V   +        + +  K +   +KP    K  
Sbjct: 170  TLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRV--TKPKKIFKGN 229

Query: 203  GKGKTPKQNKGKKGAEKGKCYHCGQNGHWLRNCPKYLA---------EKKAEKETQGKYD 262
             K K              KC+HCG+ GH  ++C  Y           EK+ +  T     
Sbjct: 230  SKYKV-------------KCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIA 289

Query: 263  LLVVETCLVE-YENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGT---GEMVSA 322
             +V E       +NC ++LDSGA++H+     + S +    E    LK+     GE + A
Sbjct: 290  FMVKEVNNTSVMDNCGFVLDSGASDHL---INDESLYTDSVEVVPPLKIAVAKQGEFIYA 349

Query: 323  SAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVC 382
            +  G ++L   D  + L++VL+  +   NL+S+  + E    I F+ +   +   G++V 
Sbjct: 350  TKRGIVRL-RNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMV- 409

Query: 383  SAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLV 442
                          + + +LN       +  +   K  +N  LWH R GHI+  ++  + 
Sbjct: 410  -------------VKNSGMLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIK 469

Query: 443  KSGLLSPLE-----DNSLPPCESCLEGKMTKRSFTGKGLR----AKGPLELVHSDLCGPM 502
            +  + S        + S   CE CL GK  +  F  K L+     K PL +VHSD+CGP+
Sbjct: 470  RKNMFSDQSLLNNLELSCEICEPCLNGKQARLPF--KQLKDKTHIKRPLFVVHSDVCGPI 529

Query: 503  NVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRG 562
                     YF+ F+D ++ Y   YLI +KS+    F+++ A+ E      +  L  D G
Sbjct: 530  TPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNG 589

Query: 563  GEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGY 622
             EY+    R + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S +++  SFWG 
Sbjct: 590  REYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGE 649

Query: 623  ALETAAYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVLVQNPK-KLEHRS 682
            A+ TA Y++N +PS+++   S+TPYE+W  +K  L+H R++G   +V ++N + K + +S
Sbjct: 650  AVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKS 709

Query: 683  KLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDK 742
                F+GY  E  G   +D    K  V+ +    E + +     + + V  + SK + +K
Sbjct: 710  FKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENK 769

Query: 743  --PSSSTKVV------------------DKTRKSGQSHPS-------------------- 802
              P+ S K++                  D      ++ P+                    
Sbjct: 770  NFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNI 829

Query: 803  QQLREPRRSGRVV------HQPDRYLG------------LIETQVVIPDDGIEDP----- 862
            Q L++ + S +         + D +L               ET   + + GI++P     
Sbjct: 830  QFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDG 889

Query: 863  ----------------LTYKQ--------------AMKDV-----------DRDQWIKAM 922
                            ++Y +                 DV           D+  W +A+
Sbjct: 890  IEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAI 949

Query: 923  DLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVD 982
            + E+ +   N+ WT+  +P +   +  +W++  K +  G    +KARLVA+G+TQ+  +D
Sbjct: 950  NTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQID 1009

Query: 983  YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQE 1042
            YEETF+PVA + S R +LS+   Y+ ++ QMDVKTAFLNG L+E IYM  P+G       
Sbjct: 1010 YEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNS 1069

Query: 1043 QKVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVY---KKVVNSIIAFLVLY 1102
              VCKL K+IYGL+  +R W   F+ A+K   F  +  + C+Y   K  +N  I +++LY
Sbjct: 1070 DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLY 1129

Query: 1103 VDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDK 1162
            VDD+++   D+  + + K++L  +F+M DL + ++ +GI+I    +   + +SQ++Y+ K
Sbjct: 1130 VDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKK 1189

Query: 1163 MLSRYKMQNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLC 1222
            +LS++ M+N      P      Y +  S E C           N P  S +G LMY MLC
Sbjct: 1190 ILSKFNMENCNAVSTPLPSKINYELLNSDEDC-----------NTPCRSLIGCLMYIMLC 1249

Query: 1223 TRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLI----LTGYTD 1282
            TRPD+  +V ++SRY S    + W  +K +L+YL+ T D  L++  K+L     + GY D
Sbjct: 1250 TRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVD 1309

BLAST of CSPI04G12000 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.5e-130
Identity = 385/1417 (27.17%), Postives = 615/1417 (43.40%), Query Frame = 0

Query: 32   ILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMKEGTSVREHV 91
            IL ++S  +        TA +I ++LR ++  P +                       HV
Sbjct: 88   ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYG----------------------HV 147

Query: 92   --LDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT----TLL 151
              L  +  F+   + G P++   QV  +LE+LP  + P     +      +LT     L+
Sbjct: 148  TQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLI 207

Query: 152  NELQRFQNLTMGKGKQVEANVA------TTKRKFIRGSSSKTKAGPSKPNA-QIKKKGKG 211
            N   +   L   +   + ANV       T + +  RG +       ++ N+ Q    G  
Sbjct: 208  NRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSR 267

Query: 212  KTPKQNKGKKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDL--------LVV 271
               +Q K       G+C  C   GH  + CP+    +    + Q             L V
Sbjct: 268  SDNRQPK----PYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAV 327

Query: 272  ETCLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKL 331
             +    Y    W+LDSGAT+HI   F  N S+ +   G   + +  G  +  +  G   L
Sbjct: 328  NS---PYNANNWLLDSGATHHITSDF-NNLSFHQPYTGGDDVMIADGSTIPITHTGSASL 387

Query: 332  FFRDRYVILKNVLYVPQMKRNLISI------SCILEQMYRISFEINEAFVFYKGILVCSA 391
                R + L  VLYVP + +NLIS+      + +  + +  SF++ +      G+ +   
Sbjct: 388  PTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKD---LNTGVPLLQG 447

Query: 392  ILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKS 451
              +D LY+        + +++      +   +   SS    WH RLGH +L  +  ++ +
Sbjct: 448  KTKDELYEWP------IASSQAVSMFASPCSKATHSS----WHSRLGHPSLAILNSVISN 507

Query: 452  GLLSPLE-DNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEY 511
              L  L   + L  C  C   K  K  F+   + +  PLE ++SD+     + +   Y Y
Sbjct: 508  HSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRY 567

Query: 512  FISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRD 571
            ++ F+D ++RY  +Y +  KS   + F  +K+ VEN     I  L SD GGE++ L  RD
Sbjct: 568  YVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVL--RD 627

Query: 572  YLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILN 631
            YL ++GI    S P TP+ NG+SER++R +++M  +++S + +  ++W YA   A Y++N
Sbjct: 628  YLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLIN 687

Query: 632  NVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ--NPKKLEHRSKLCFFIGYPKE 691
             +P+  +  ++P++   G+  +    +++GC  +  ++  N  KLE +SK C F+GY   
Sbjct: 688  RLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLT 747

Query: 692  SRGGLFYDPQENKIFVSTNATFLEE----------------------------------- 751
                L       +++ S +  F E                                    
Sbjct: 748  QSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTP 807

Query: 752  ----------DHIRDHQPR-----SKLVLKEIS-----KSAIDKPSSSTKVV---DKTRK 811
                       H+ D  PR     S L   ++S      S+I  PSSS       +  + 
Sbjct: 808  LVLPAPPCLGPHL-DTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQP 867

Query: 812  SGQSHPSQQ-------LREPRRSGRVVHQPDRYLGLIETQVVIP---------------- 871
            + Q H +Q        L  P  +    + P++   L ++ +  P                
Sbjct: 868  TAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPS 927

Query: 872  ------------------------------------DDGI----------------EDPL 931
                                                 DGI                 +P 
Sbjct: 928  SSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPR 987

Query: 932  TYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPIGCKWIYKRKRDHAGKV 991
            T  QAMKD   D+W +AM  E+ +   N  W LV   P  V  +GC+WI+ +K +  G +
Sbjct: 988  TAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 1047

Query: 992  QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 1051
              +KARLVAKGY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G 
Sbjct: 1048 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1107

Query: 1052 LEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPC 1111
            L + +YMSQP GF+++D+   VC+L+K+IYGL+   R+W +   T + + GF  ++ +  
Sbjct: 1108 LTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTS 1167

Query: 1112 VYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRN 1171
            ++       I ++++YVDDIL+ GND   L      L+ +F +K+  D  Y LGI+    
Sbjct: 1168 LFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AK 1227

Query: 1172 RKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYA 1231
            R  + L +SQ  Y   +L+R  M  +K    P      L+     K P   E      Y 
Sbjct: 1228 RVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YR 1287

Query: 1232 SAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRSTKDY-MLMYGTK 1283
              VGSL Y +  TRPD+ Y+V  +S+Y   P  DHW A+K +L+YL  T D+ + +    
Sbjct: 1288 GIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGN 1347

BLAST of CSPI04G12000 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 3.2e-128
Identity = 374/1410 (26.52%), Postives = 619/1410 (43.90%), Query Frame = 0

Query: 32   ILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMKEGT-SVREH 91
            +L ++S  +        TA +I ++LR ++  P +   H        K+  +GT ++ ++
Sbjct: 88   VLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYG--HVTQLRTQLKQWTKGTKTIDDY 147

Query: 92   VLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT----TLLN 151
            +  ++  F+   + G P++   QV  +LE+LP+ + P     +       LT     LLN
Sbjct: 148  MQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLN 207

Query: 152  ELQRFQNLTMGKGKQVEANV-----ATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTP 211
               +   ++      + AN       TT      G+ +      +  N     +      
Sbjct: 208  HESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNF 267

Query: 212  KQNKGKKGAEKGKCYHCGQNGHWLRNCPK---YLAEKKAEKET------QGKYDLLVVET 271
              N  +     GKC  CG  GH  + C +   +L+   +++        Q + +L +   
Sbjct: 268  HPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGS- 327

Query: 272  CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFF 331
                Y +  W+LDSGAT+HI   F   S  +  + G+  + V  G  +  S  G   L  
Sbjct: 328  ---PYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGD-DVMVADGSTIPISHTGSTSLST 387

Query: 332  RDRYVILKNVLYVPQMKRNLISI------SCILEQMYRISFEINEAFVFYKGILVCSAIL 391
            + R + L N+LYVP + +NLIS+      + +  + +  SF++ +      G+ +     
Sbjct: 388  KSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKD---LNTGVPLLQGKT 447

Query: 392  EDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGL 451
            +D LY+        + +++      + + +   SS    WH RLGH   + +  ++ +  
Sbjct: 448  KDELYEWP------IASSQPVSLFASPSSKATHSS----WHARLGHPAPSILNSVISNYS 507

Query: 452  LSPLE-DNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFI 511
            LS L   +    C  CL  K  K  F+   + +  PLE ++SD+     + +   Y Y++
Sbjct: 508  LSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYV 567

Query: 512  SFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL 571
             F+D ++RY  +Y +  KS   E F  +K  +EN     I    SD GGE++ L   +Y 
Sbjct: 568  IFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYF 627

Query: 572  IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNV 631
             ++GI    S P TP+ NG+SER++R +++   +++S + +  ++W YA   A Y++N +
Sbjct: 628  SQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRL 687

Query: 632  PSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ--NPKKLEHRSKLCFFIGYPKESR 691
            P+  +  E+P++   G   +    R++GC  +  ++  N  KL+ +S+ C F+GY     
Sbjct: 688  PTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQS 747

Query: 692  GGLFYDPQENKIFVSTNATFLEE-----------DHIRDHQPRSKLVL------------ 751
              L    Q +++++S +  F E              +++ +  S  V             
Sbjct: 748  AYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPV 807

Query: 752  -------------------------KEISKSAIDKPSSST----------------KVVD 811
                                      ++S S +D   SS+                    
Sbjct: 808  LPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQ 867

Query: 812  KTRKSGQSHPS-----------------QQLREPRRSGR--------------------- 871
             T+   Q+H S                 Q L  P +S                       
Sbjct: 868  PTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSI 927

Query: 872  VVHQPDRYLGLIETQVVIP----------DDGI----------------EDPLTYKQAMK 931
            ++H P     ++      P            GI                 +P T  QA+K
Sbjct: 928  LIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALK 987

Query: 932  DVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL 991
            D   ++W  AM  E+ +   N  W LV   P+ V  +GC+WI+ +K +  G +  +KARL
Sbjct: 988  D---ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARL 1047

Query: 992  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYM 1051
            VAKGY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L + +YM
Sbjct: 1048 VAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYM 1107

Query: 1052 SQPEGFIEQDQEQKVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVN 1111
            SQP GFI++D+   VCKL+K++YGL+   R+W +     + + GF  +V +  ++     
Sbjct: 1108 SQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRG 1167

Query: 1112 SIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLA 1171
              I ++++YVDDIL+ GND   L +    L+ +F +KD  +  Y LGI+    R    L 
Sbjct: 1168 KSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLH 1227

Query: 1172 MSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLM 1231
            +SQ  YI  +L+R  M  +K    P      LS     K     E      Y   VGSL 
Sbjct: 1228 LSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQ 1287

Query: 1232 YAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRSTKDY-MLMYGTKDLILTGY 1283
            Y +  TRPDI Y+V  +S++   P  +H  A+K IL+YL  T ++ + +     L L  Y
Sbjct: 1288 Y-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAY 1347

BLAST of CSPI04G12000 vs. ExPASy Swiss-Prot
Match: Q99337 (Transposon Ty1-NL2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-NL2 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.4e-35
Identity = 285/1326 (21.49%), Postives = 498/1326 (37.56%), Query Frame = 0

Query: 263  ILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDRYVILKNV 322
            +LDSGA+  +  S     S    S  +I +       +  +A+GDL+  F+D       V
Sbjct: 459  LLDSGASRTLIRSAHHIHS--ASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKV 518

Query: 323  LYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFVL 382
            L+ P +  +L+S++ +        F  N       G ++   +   + Y +      ++L
Sbjct: 519  LHTPNIAYDLLSLNELAAVDITACFTKN-VLERSDGTVLAPIVKYGDFYWV---SKKYLL 578

Query: 383  NTEIFRTAETQNKRQKVSSNAYLW---HLRLGHINLNRIGRLVKSGLLSPLEDNSLP--- 442
             + I       N     S+  Y +   H  L H N   I   +K+  ++   ++ +    
Sbjct: 579  PSNI-SVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSS 638

Query: 443  ----PCESCLEGKMTK-RSFTGKGLRAKG---PLELVHSDLCGPMNVKARGGYEYFISFI 502
                 C  CL GK TK R   G  L+ +    P + +H+D+ GP++   +    YFISF 
Sbjct: 639  AIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFT 698

Query: 503  DDYSRYGHIYLIH--HKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLI 562
            D+ +++  +Y +H   + + L+ F    A ++N+   ++ +++ DRG EY +     +L 
Sbjct: 699  DETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLE 758

Query: 563  ENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVP 622
            +NGI    +  +  + +GV+ER NRTLLD  R+ +  S + +  W  A+E +  + N++ 
Sbjct: 759  KNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA 818

Query: 623  SKSVSETPYELWKGRKGSLRHFRI----------WGCPAHVLVQNPKKLEH--------- 682
            S           K +K + +H  +          +G P  V   NP    H         
Sbjct: 819  SP----------KSKKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIHPRGIPGYAL 878

Query: 683  ---RSKLCFFIGYP----------------KESR------GGLFYDPQENKI------FV 742
               R+   + I  P                KESR        L +D   N++      F+
Sbjct: 879  HPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYQSFI 938

Query: 743  STN-------ATFLEEDHIRDHQPR---------------------SKLVLK-------- 802
            ++N         F  +  +   QPR                     SK V K        
Sbjct: 939  ASNEIQQSDDLNFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRAPRE 998

Query: 803  ---EISKSAI--DKPSSSTKVVDKTRKSG----------------------QSHPSQ--- 862
                ISKS I   K  SST  +     +G                       SH S+   
Sbjct: 999  VDPNISKSDILPSKKRSSTPQISDIESTGSGGMHRLDVPLLAPMSQSNTHESSHTSKSKD 1058

Query: 863  -------------------------------QLREPRRSGRVVHQ--------------- 922
                                           Q  E     R++H+               
Sbjct: 1059 FRHSDSYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLH 1118

Query: 923  --------------------------PD-------------------------------- 982
                                      PD                                
Sbjct: 1119 HVVPIKTSDTCPKENTEESIIADLPLPDLPPEPPTKLSDSFKELPPINSRQTNSSLGGIG 1178

Query: 983  ------------RYLGLIETQVVIPDD--------GIEDP-------------------- 1042
                        R L   ET++ +  D         +E P                    
Sbjct: 1179 DSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKP 1238

Query: 1043 ----LTYKQAM---KDV-DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCK----- 1102
                L Y +A+   KD+ +++++I+A   E+  +     W   D+  D K I  K     
Sbjct: 1239 IRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWD-TDKYYDRKEIDPKRVINS 1298

Query: 1103 -WIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYE 1162
             +I+ RKRD      T KAR VA+G  Q          S      ++   LS+A   +Y 
Sbjct: 1299 MFIFNRKRD-----GTHKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYY 1358

Query: 1163 IWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLQACSRSWNIRFDTA 1222
            I Q+D+ +A+L  +++E +Y+  P      D   K+ +LKKS+YGL+    +W   ++T 
Sbjct: 1359 ITQLDISSAYLYADIKEELYIRPPPHLGMND---KLIRLKKSLYGLKQSGANW---YET- 1418

Query: 1223 IKSYGFEQ-NVDE----PCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQF 1275
            IKSY  EQ +++E     CV+K   NS +  + L+VDD++L   D+     I   L  Q+
Sbjct: 1419 IKSYLIEQCDMEEVRGWSCVFK---NSQVT-ICLFVDDMILFSKDLNANKKIITTLKKQY 1478

BLAST of CSPI04G12000 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 2192.5 bits (5680), Expect = 0.0e+00
Identity = 1075/1232 (87.26%), Postives = 1154/1232 (93.67%), Query Frame = 0

Query: 22   IKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRM 81
            +KAN+KARVYILASM+DVLAKKH+S+ATAK IMDSLR MFGQP WSLRHEA+K+IYTKRM
Sbjct: 63   VKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTKRM 122

Query: 82   KEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNL 141
            KEGTSVREHVLDMMMHFNIAEVNGGPI+E NQVSFIL+SLPKSF+PFQTNASLNKIEFNL
Sbjct: 123  KEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEFNL 182

Query: 142  TTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTP 201
            TTLLNELQRFQNLT+ KGK+VEANVA TKRKFIRGSSSK K GPSK  AQ+KKKGKGK P
Sbjct: 183  TTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSK--AQMKKKGKGKAP 242

Query: 202  KQNKGKKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLVEYENCT 261
              +K KK A+KGKC+HC Q+GHW RNCPKYLAEKKAEK TQGKYDLLVVETCLVE +  T
Sbjct: 243  NTSKVKKNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVECDAST 302

Query: 262  WILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDRYVILKN 321
            WILDSGATNHICFSFQE SSWKKL EGEITLKVGTGE+VSA AVGDL LFF+DRY+ILK+
Sbjct: 303  WILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRYLILKD 362

Query: 322  VLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFV 381
            VLYVP MKRNLISI+CILE +Y ISFE+NE F+  KGI +CSAI E+NLYKLRPTRAN V
Sbjct: 363  VLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRANVV 422

Query: 382  LNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESC 441
            LNTE+FRT ETQNK+QKVSSNAYLWHLRLGHINLNRI RLVKSG+L+ LEDNSLPPCESC
Sbjct: 423  LNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCESC 482

Query: 442  LEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIH 501
            LEGKMTKRSFTGKGLRAK PLELVHSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL+H
Sbjct: 483  LEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYLLH 542

Query: 502  HKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQ 561
            HKS S EKFKEYKAEVENE+GKTIK LRSDRGGEYMD +F+DYLIE GIQSQLSAPSTPQ
Sbjct: 543  HKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQ 602

Query: 562  QNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGR 621
            QNGVSERRNRTLLDMVRSMMS++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGR
Sbjct: 603  QNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWKGR 662

Query: 622  KGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNAT 681
            K SLR+FRIWGCPAHVLVQNPKKLE RSKLC F+GYPKESRGGLFY PQENK+FVSTNAT
Sbjct: 663  KSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTNAT 722

Query: 682  FLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRV 741
            FLEEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK   S QSH SQ+LR PRRSGRV
Sbjct: 723  FLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSHTSQELRVPRRSGRV 782

Query: 742  VHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV 801
            VHQP+RYLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSVWTLV
Sbjct: 783  VHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFNSVWTLV 842

Query: 802  DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRI 861
            D P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRI
Sbjct: 843  DLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRI 902

Query: 862  LLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLQAC 921
            LLSIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYGL+  
Sbjct: 903  LLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQA 962

Query: 922  SRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKK 981
            SRSWNIRFDTAIKSYGFEQNVDEPCVYKK+VNS++AFL+LYVDDILLIGNDV YLTD+KK
Sbjct: 963  SRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKK 1022

Query: 982  WLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRY 1041
            WL  QFQMKDLG+AQY+LGIQIVRNRKNKTLAMSQASYIDK+LSRYKMQNSKKG LP+R+
Sbjct: 1023 WLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRH 1082

Query: 1042 GIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDH 1101
            GIHLSKEQCPKTPQEVEDMRNIPY+SAVGSLMYAMLCTRPDICYSVG+VSRYQSNPGRDH
Sbjct: 1083 GIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDH 1142

Query: 1102 WTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGRAVVW 1161
            WTAVKNILKYLR T++YML+YG KDLILTGYTDSDFQ+DKDARKSTSGSVFTLNG AVVW
Sbjct: 1143 WTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVW 1202

Query: 1162 RSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHLPITLYCDNSGAVANS 1221
            RS+KQ CI DSTMEAEYVA CEAAKE VW RKFLTDLEVVPNMHLPITLYCDNSGAVANS
Sbjct: 1203 RSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVANS 1262

Query: 1222 REPRSHKRGKHIERKYHLIREIVHRGDVVVTQ 1254
            +EPRSHKRGKHIERKYHLIREIVHRGDVVVTQ
Sbjct: 1263 KEPRSHKRGKHIERKYHLIREIVHRGDVVVTQ 1292

BLAST of CSPI04G12000 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 933/1277 (73.06%), Postives = 1083/1277 (84.81%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  RM 
Sbjct: 64   KANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMN 123

Query: 83   EGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT 142
            EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI + LT
Sbjct: 124  EGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLT 183

Query: 143  TLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTP 202
            TLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G+  
Sbjct: 184  TLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGN 243

Query: 203  KQNKG------KKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLV 262
            K N        K  A KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ETCLV
Sbjct: 244  KANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLETCLV 303

Query: 263  EYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDR 322
            E ++  WI+DSGATNH+C SFQ  SSW++L  GE+T++VGTG +VSA AVG L+L  +  
Sbjct: 304  ENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKS 363

Query: 323  YVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRP 382
            +++L+NV  VP +KRNLIS+ C+LEQ Y ++F +N+ F++  G+ +CSA LE+NLY LR 
Sbjct: 364  FLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRS 423

Query: 383  TRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDN 442
              +  +LNTE+F+TA TQNKR K+S   NA+LWHLRLGHINLNRI RLVK+GLLS LE+N
Sbjct: 424  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEEN 483

Query: 443  SLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 502
            SLP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSR
Sbjct: 484  SLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 543

Query: 503  YGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 562
            YG++YL+ HKS +LEKFKEYKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI SQ
Sbjct: 544  YGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQ 603

Query: 563  LSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSET 622
            LSAP TPQQNGVSERRNRTLLDMVRSMMS++ + +SFWGYA++TA YILN VPSKSVSET
Sbjct: 604  LSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSET 663

Query: 623  PYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENK 682
            P +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYDP++NK
Sbjct: 664  PLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNK 723

Query: 683  IFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSGQS 742
            +FVSTNATFLEEDHIR+H+PRSK+VL E+SK         +++PS+ T+VV     S ++
Sbjct: 724  VFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVGSSTRT 783

Query: 743  HPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMD 802
            H  Q LREPRRSGRV + P RY+ L ET  VI D  IEDPLT+K+AM+DVD+D+WIKAM+
Sbjct: 784  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 843

Query: 803  LEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDY 862
            LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 844  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 903

Query: 863  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQ 922
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI   QEQ
Sbjct: 904  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 963

Query: 923  KVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDI 982
            K+CKL +SIYGL+  SRSWNIRFDTAIKSYGF+Q VDEPCVYK+++N  +AFLVLYVDDI
Sbjct: 964  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1023

Query: 983  LLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSR 1042
            LLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYIDK++ +
Sbjct: 1024 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1083

Query: 1043 YKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYS 1102
            Y MQNSK+GLLP+R+G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYAMLCTRPDICY+
Sbjct: 1084 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1143

Query: 1103 VGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKS 1162
            VG+VSRYQSNPG  HWTAVK ILKYLR T+DY L+YG+KDLILTGYTDSDFQTD+D+RKS
Sbjct: 1144 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1203

Query: 1163 TSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHL 1222
            TSGSVFTLNG AVVWRSIKQ CI DSTMEAEYVA CEAAKE VW R FL DLEVVPNM  
Sbjct: 1204 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1263

Query: 1223 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTK 1282
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDV+VTQI+S  N+ADPFTK
Sbjct: 1264 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1323

Query: 1283 ALTAKVFEGHLHNLGLR 1284
             LTAKVFEGHL +LGLR
Sbjct: 1324 PLTAKVFEGHLESLGLR 1337

BLAST of CSPI04G12000 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 933/1277 (73.06%), Postives = 1083/1277 (84.81%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  RM 
Sbjct: 64   KANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMN 123

Query: 83   EGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT 142
            EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI + LT
Sbjct: 124  EGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLT 183

Query: 143  TLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTP 202
            TLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G+  
Sbjct: 184  TLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGN 243

Query: 203  KQNKG------KKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLV 262
            K N        K  A KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ETCLV
Sbjct: 244  KANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLETCLV 303

Query: 263  EYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDR 322
            E ++  WI+DSGATNH+C SFQ  SSW++L  GE+T++VGTG +VSA AVG L+L  +  
Sbjct: 304  ENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKS 363

Query: 323  YVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRP 382
            +++L+NV  VP +KRNLIS+ C+LEQ Y ++F +N+ F++  G+ +CSA LE+NLY LR 
Sbjct: 364  FLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRS 423

Query: 383  TRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDN 442
              +  +LNTE+F+TA TQNKR K+S   NA+LWHLRLGHINLNRI RLVK+GLLS LE+N
Sbjct: 424  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEEN 483

Query: 443  SLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 502
            SLP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSR
Sbjct: 484  SLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 543

Query: 503  YGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 562
            YG++YL+ HKS +LEKFKEYKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI SQ
Sbjct: 544  YGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQ 603

Query: 563  LSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSET 622
            LSAP TPQQNGVSERRNRTLLDMVRSMMS++ + +SFWGYA++TA YILN VPSKSVSET
Sbjct: 604  LSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSET 663

Query: 623  PYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENK 682
            P +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYDP++NK
Sbjct: 664  PLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNK 723

Query: 683  IFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSGQS 742
            +FVSTNATFLEEDHIR+H+PRSK+VL E+SK         +++PS+ T+VV     S ++
Sbjct: 724  VFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVGSSTRT 783

Query: 743  HPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMD 802
            H  Q LREPRRSGRV + P RY+ L ET  VI D  IEDPLT+K+AM+DVD+D+WIKAM+
Sbjct: 784  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 843

Query: 803  LEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDY 862
            LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 844  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 903

Query: 863  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQ 922
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI   QEQ
Sbjct: 904  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 963

Query: 923  KVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDI 982
            K+CKL +SIYGL+  SRSWNIRFDTAIKSYGF+Q VDEPCVYK+++N  +AFLVLYVDDI
Sbjct: 964  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1023

Query: 983  LLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSR 1042
            LLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYIDK++ +
Sbjct: 1024 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1083

Query: 1043 YKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYS 1102
            Y MQNSK+GLLP+R+G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYAMLCTRPDICY+
Sbjct: 1084 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1143

Query: 1103 VGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKS 1162
            VG+VSRYQSNPG  HWTAVK ILKYLR T+DY L+YG+KDLILTGYTDSDFQTD+D+RKS
Sbjct: 1144 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1203

Query: 1163 TSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHL 1222
            TSGSVFTLNG AVVWRSIKQ CI DSTMEAEYVA CEAAKE VW R FL DLEVVPNM  
Sbjct: 1204 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1263

Query: 1223 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTK 1282
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDV+VTQI+S  N+ADPFTK
Sbjct: 1264 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1323

Query: 1283 ALTAKVFEGHLHNLGLR 1284
             LTAKVFEGHL +LGLR
Sbjct: 1324 PLTAKVFEGHLESLGLR 1337

BLAST of CSPI04G12000 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 933/1277 (73.06%), Postives = 1083/1277 (84.81%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  RM 
Sbjct: 63   KANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMN 122

Query: 83   EGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT 142
            EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI + LT
Sbjct: 123  EGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLT 182

Query: 143  TLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTP 202
            TLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G+  
Sbjct: 183  TLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGN 242

Query: 203  KQNKG------KKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLV 262
            K N        K  A KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ETCLV
Sbjct: 243  KANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLETCLV 302

Query: 263  EYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDR 322
            E ++  WI+DSGATNH+C SFQ  SSW++L  GE+T++VGTG +VSA AVG L+L  +  
Sbjct: 303  ENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKS 362

Query: 323  YVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRP 382
            +++L+NV  VP +KRNLIS+ C+LEQ Y ++F +N+ F++  G+ +CSA LE+NLY LR 
Sbjct: 363  FLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRS 422

Query: 383  TRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDN 442
              +  +LNTE+F+TA TQNKR K+S   NA+LWHLRLGHINLNRI RLVK+GLLS LE+N
Sbjct: 423  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEEN 482

Query: 443  SLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 502
            SLP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSR
Sbjct: 483  SLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 542

Query: 503  YGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 562
            YG++YL+ HKS +LEKFKEYKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI SQ
Sbjct: 543  YGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQ 602

Query: 563  LSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSET 622
            LSAP TPQQNGVSERRNRTLLDMVRSMMS++ + +SFWGYA++TA YILN VPSKSVSET
Sbjct: 603  LSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSET 662

Query: 623  PYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENK 682
            P +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYDP++NK
Sbjct: 663  PLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNK 722

Query: 683  IFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSGQS 742
            +FVSTNATFLEEDHIR+H+PRSK+VL E+SK         +++PS+ T+VV     S ++
Sbjct: 723  VFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVGSSTRT 782

Query: 743  HPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMD 802
            H  Q LREPRRSGRV + P RY+ L ET  VI D  IEDPLT+K+AM+DVD+D+WIKAM+
Sbjct: 783  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 842

Query: 803  LEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDY 862
            LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 843  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 902

Query: 863  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQ 922
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI   QEQ
Sbjct: 903  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 962

Query: 923  KVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDI 982
            K+CKL +SIYGL+  SRSWNIRFDTAIKSYGF+Q VDEPCVYK+++N  +AFLVLYVDDI
Sbjct: 963  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1022

Query: 983  LLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSR 1042
            LLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYIDK++ +
Sbjct: 1023 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1082

Query: 1043 YKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYS 1102
            Y MQNSK+GLLP+R+G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYAMLCTRPDICY+
Sbjct: 1083 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1142

Query: 1103 VGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKS 1162
            VG+VSRYQSNPG  HWTAVK ILKYLR T+DY L+YG+KDLILTGYTDSDFQTD+D+RKS
Sbjct: 1143 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1202

Query: 1163 TSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHL 1222
            TSGSVFTLNG AVVWRSIKQ CI DSTMEAEYVA CEAAKE VW R FL DLEVVPNM  
Sbjct: 1203 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1262

Query: 1223 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTK 1282
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDV+VTQI+S  N+ADPFTK
Sbjct: 1263 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1322

Query: 1283 ALTAKVFEGHLHNLGLR 1284
             LTAKVFEGHL +LGLR
Sbjct: 1323 PLTAKVFEGHLESLGLR 1336

BLAST of CSPI04G12000 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 1857.4 bits (4810), Expect = 0.0e+00
Identity = 923/1265 (72.96%), Postives = 1072/1265 (84.74%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  RM 
Sbjct: 64   KANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMN 123

Query: 83   EGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT 142
            EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI + LT
Sbjct: 124  EGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLT 183

Query: 143  TLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTP 202
            TLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G+  
Sbjct: 184  TLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGN 243

Query: 203  KQNKG------KKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLV 262
            K N        K  A KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ETCLV
Sbjct: 244  KANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLETCLV 303

Query: 263  EYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDR 322
            E ++  WI+DSGATNH+C SFQ  SSW++L  GE+T++VGTG +VSA AVG L+L  +  
Sbjct: 304  ENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKS 363

Query: 323  YVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRP 382
            +++L+NV  VP +KRNLIS+ C+LEQ Y ++F +N+ F++  G+ +CSA LE+NLY LR 
Sbjct: 364  FLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRS 423

Query: 383  TRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDN 442
              +  +LNTE+F+TA TQNKR K+S   NA+LWHLRLGHINLNRI RLVK+GLLS LE+N
Sbjct: 424  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEEN 483

Query: 443  SLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 502
            SLP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSR
Sbjct: 484  SLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 543

Query: 503  YGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 562
            YG++YL+ HKS +LEKFKEYKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI SQ
Sbjct: 544  YGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQ 603

Query: 563  LSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSET 622
            LSAP TPQQNGVSERRNRTLLDMVRSMMS++ + +SFWGYA++TA YILN VPSKSVSET
Sbjct: 604  LSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSET 663

Query: 623  PYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENK 682
            P +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYDP++NK
Sbjct: 664  PLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNK 723

Query: 683  IFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSGQS 742
            +FVSTNATFLEEDHIR+H+PRSK+VL E+SK         +++PS+ T+VV     S ++
Sbjct: 724  VFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVGSSTRT 783

Query: 743  HPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMD 802
            H  Q LREPRRSGRV + P RY+ L ET  VI D  IEDPLT+K+AM+DVD+D+WIKAM+
Sbjct: 784  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 843

Query: 803  LEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDY 862
            LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 844  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 903

Query: 863  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQ 922
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI   QEQ
Sbjct: 904  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 963

Query: 923  KVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDI 982
            K+CKL +SIYGL+  SRSWNIRFDTAIKSYGF+Q VDEPCVYK+++N  +AFLVLYVDDI
Sbjct: 964  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1023

Query: 983  LLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSR 1042
            LLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYIDK++ +
Sbjct: 1024 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1083

Query: 1043 YKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYS 1102
            Y MQNSK+GLLP+R+G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYAMLCTRPDICY+
Sbjct: 1084 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1143

Query: 1103 VGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKS 1162
            VG+VSRYQSNPG  HWTAVK ILKYLR T+DYML+YG+KDLILTGYTDSDFQTD+D+RKS
Sbjct: 1144 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKS 1203

Query: 1163 TSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHL 1222
            TSGSVF LNG AVVWRSIKQ CI DSTMEAEYVA CEAAKE VW R FL DLEVVPNM  
Sbjct: 1204 TSGSVFILNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1263

Query: 1223 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTK 1272
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDV+VTQI+S  N+ADPFTK
Sbjct: 1264 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1323

BLAST of CSPI04G12000 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 2192.5 bits (5680), Expect = 0.0e+00
Identity = 1075/1232 (87.26%), Postives = 1154/1232 (93.67%), Query Frame = 0

Query: 22   IKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRM 81
            +KAN+KARVYILASM+DVLAKKH+S+ATAK IMDSLR MFGQP WSLRHEA+K+IYTKRM
Sbjct: 63   VKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTKRM 122

Query: 82   KEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNL 141
            KEGTSVREHVLDMMMHFNIAEVNGGPI+E NQVSFIL+SLPKSF+PFQTNASLNKIEFNL
Sbjct: 123  KEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEFNL 182

Query: 142  TTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTP 201
            TTLLNELQRFQNLT+ KGK+VEANVA TKRKFIRGSSSK K GPSK  AQ+KKKGKGK P
Sbjct: 183  TTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSK--AQMKKKGKGKAP 242

Query: 202  KQNKGKKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLVEYENCT 261
              +K KK A+KGKC+HC Q+GHW RNCPKYLAEKKAEK TQGKYDLLVVETCLVE +  T
Sbjct: 243  NTSKVKKNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVECDAST 302

Query: 262  WILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDRYVILKN 321
            WILDSGATNHICFSFQE SSWKKL EGEITLKVGTGE+VSA AVGDL LFF+DRY+ILK+
Sbjct: 303  WILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRYLILKD 362

Query: 322  VLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFV 381
            VLYVP MKRNLISI+CILE +Y ISFE+NE F+  KGI +CSAI E+NLYKLRPTRAN V
Sbjct: 363  VLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRANVV 422

Query: 382  LNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESC 441
            LNTE+FRT ETQNK+QKVSSNAYLWHLRLGHINLNRI RLVKSG+L+ LEDNSLPPCESC
Sbjct: 423  LNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCESC 482

Query: 442  LEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIH 501
            LEGKMTKRSFTGKGLRAK PLELVHSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL+H
Sbjct: 483  LEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYLLH 542

Query: 502  HKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQ 561
            HKS S EKFKEYKAEVENE+GKTIK LRSDRGGEYMD +F+DYLIE GIQSQLSAPSTPQ
Sbjct: 543  HKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQ 602

Query: 562  QNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGR 621
            QNGVSERRNRTLLDMVRSMMS++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGR
Sbjct: 603  QNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWKGR 662

Query: 622  KGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNAT 681
            K SLR+FRIWGCPAHVLVQNPKKLE RSKLC F+GYPKESRGGLFY PQENK+FVSTNAT
Sbjct: 663  KSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTNAT 722

Query: 682  FLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRV 741
            FLEEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK   S QSH SQ+LR PRRSGRV
Sbjct: 723  FLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSHTSQELRVPRRSGRV 782

Query: 742  VHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV 801
            VHQP+RYLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSVWTLV
Sbjct: 783  VHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFNSVWTLV 842

Query: 802  DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRI 861
            D P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRI
Sbjct: 843  DLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRI 902

Query: 862  LLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLQAC 921
            LLSIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYGL+  
Sbjct: 903  LLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQA 962

Query: 922  SRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKK 981
            SRSWNIRFDTAIKSYGFEQNVDEPCVYKK+VNS++AFL+LYVDDILLIGNDV YLTD+KK
Sbjct: 963  SRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKK 1022

Query: 982  WLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRY 1041
            WL  QFQMKDLG+AQY+LGIQIVRNRKNKTLAMSQASYIDK+LSRYKMQNSKKG LP+R+
Sbjct: 1023 WLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRH 1082

Query: 1042 GIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDH 1101
            GIHLSKEQCPKTPQEVEDMRNIPY+SAVGSLMYAMLCTRPDICYSVG+VSRYQSNPGRDH
Sbjct: 1083 GIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDH 1142

Query: 1102 WTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGRAVVW 1161
            WTAVKNILKYLR T++YML+YG KDLILTGYTDSDFQ+DKDARKSTSGSVFTLNG AVVW
Sbjct: 1143 WTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVW 1202

Query: 1162 RSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHLPITLYCDNSGAVANS 1221
            RS+KQ CI DSTMEAEYVA CEAAKE VW RKFLTDLEVVPNMHLPITLYCDNSGAVANS
Sbjct: 1203 RSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVANS 1262

Query: 1222 REPRSHKRGKHIERKYHLIREIVHRGDVVVTQ 1254
            +EPRSHKRGKHIERKYHLIREIVHRGDVVVTQ
Sbjct: 1263 KEPRSHKRGKHIERKYHLIREIVHRGDVVVTQ 1292

BLAST of CSPI04G12000 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 933/1277 (73.06%), Postives = 1083/1277 (84.81%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  RM 
Sbjct: 63   KANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMN 122

Query: 83   EGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT 142
            EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI + LT
Sbjct: 123  EGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLT 182

Query: 143  TLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTP 202
            TLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G+  
Sbjct: 183  TLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGN 242

Query: 203  KQNKG------KKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLV 262
            K N        K  A KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ETCLV
Sbjct: 243  KANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLETCLV 302

Query: 263  EYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDR 322
            E ++  WI+DSGATNH+C SFQ  SSW++L  GE+T++VGTG +VSA AVG L+L  +  
Sbjct: 303  ENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKS 362

Query: 323  YVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRP 382
            +++L+NV  VP +KRNLIS+ C+LEQ Y ++F +N+ F++  G+ +CSA LE+NLY LR 
Sbjct: 363  FLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRS 422

Query: 383  TRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDN 442
              +  +LNTE+F+TA TQNKR K+S   NA+LWHLRLGHINLNRI RLVK+GLLS LE+N
Sbjct: 423  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEEN 482

Query: 443  SLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 502
            SLP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSR
Sbjct: 483  SLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 542

Query: 503  YGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 562
            YG++YL+ HKS +LEKFKEYKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI SQ
Sbjct: 543  YGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQ 602

Query: 563  LSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSET 622
            LSAP TPQQNGVSERRNRTLLDMVRSMMS++ + +SFWGYA++TA YILN VPSKSVSET
Sbjct: 603  LSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSET 662

Query: 623  PYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENK 682
            P +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYDP++NK
Sbjct: 663  PLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNK 722

Query: 683  IFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSGQS 742
            +FVSTNATFLEEDHIR+H+PRSK+VL E+SK         +++PS+ T+VV     S ++
Sbjct: 723  VFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVGSSTRT 782

Query: 743  HPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMD 802
            H  Q LREPRRSGRV + P RY+ L ET  VI D  IEDPLT+K+AM+DVD+D+WIKAM+
Sbjct: 783  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 842

Query: 803  LEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDY 862
            LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 843  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 902

Query: 863  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQ 922
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI   QEQ
Sbjct: 903  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 962

Query: 923  KVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDI 982
            K+CKL +SIYGL+  SRSWNIRFDTAIKSYGF+Q VDEPCVYK+++N  +AFLVLYVDDI
Sbjct: 963  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1022

Query: 983  LLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSR 1042
            LLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYIDK++ +
Sbjct: 1023 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1082

Query: 1043 YKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYS 1102
            Y MQNSK+GLLP+R+G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYAMLCTRPDICY+
Sbjct: 1083 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1142

Query: 1103 VGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKS 1162
            VG+VSRYQSNPG  HWTAVK ILKYLR T+DY L+YG+KDLILTGYTDSDFQTD+D+RKS
Sbjct: 1143 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1202

Query: 1163 TSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHL 1222
            TSGSVFTLNG AVVWRSIKQ CI DSTMEAEYVA CEAAKE VW R FL DLEVVPNM  
Sbjct: 1203 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1262

Query: 1223 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTK 1282
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDV+VTQI+S  N+ADPFTK
Sbjct: 1263 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1322

Query: 1283 ALTAKVFEGHLHNLGLR 1284
             LTAKVFEGHL +LGLR
Sbjct: 1323 PLTAKVFEGHLESLGLR 1336

BLAST of CSPI04G12000 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 933/1277 (73.06%), Postives = 1083/1277 (84.81%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  RM 
Sbjct: 64   KANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMN 123

Query: 83   EGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT 142
            EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI + LT
Sbjct: 124  EGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLT 183

Query: 143  TLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTP 202
            TLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G+  
Sbjct: 184  TLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGN 243

Query: 203  KQNKG------KKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLV 262
            K N        K  A KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ETCLV
Sbjct: 244  KANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLETCLV 303

Query: 263  EYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDR 322
            E ++  WI+DSGATNH+C SFQ  SSW++L  GE+T++VGTG +VSA AVG L+L  +  
Sbjct: 304  ENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKS 363

Query: 323  YVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRP 382
            +++L+NV  VP +KRNLIS+ C+LEQ Y ++F +N+ F++  G+ +CSA LE+NLY LR 
Sbjct: 364  FLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRS 423

Query: 383  TRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDN 442
              +  +LNTE+F+TA TQNKR K+S   NA+LWHLRLGHINLNRI RLVK+GLLS LE+N
Sbjct: 424  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEEN 483

Query: 443  SLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 502
            SLP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSR
Sbjct: 484  SLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 543

Query: 503  YGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 562
            YG++YL+ HKS +LEKFKEYKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI SQ
Sbjct: 544  YGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQ 603

Query: 563  LSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSET 622
            LSAP TPQQNGVSERRNRTLLDMVRSMMS++ + +SFWGYA++TA YILN VPSKSVSET
Sbjct: 604  LSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSET 663

Query: 623  PYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENK 682
            P +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYDP++NK
Sbjct: 664  PLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNK 723

Query: 683  IFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSGQS 742
            +FVSTNATFLEEDHIR+H+PRSK+VL E+SK         +++PS+ T+VV     S ++
Sbjct: 724  VFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVGSSTRT 783

Query: 743  HPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMD 802
            H  Q LREPRRSGRV + P RY+ L ET  VI D  IEDPLT+K+AM+DVD+D+WIKAM+
Sbjct: 784  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 843

Query: 803  LEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDY 862
            LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 844  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 903

Query: 863  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQ 922
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI   QEQ
Sbjct: 904  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 963

Query: 923  KVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDI 982
            K+CKL +SIYGL+  SRSWNIRFDTAIKSYGF+Q VDEPCVYK+++N  +AFLVLYVDDI
Sbjct: 964  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1023

Query: 983  LLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSR 1042
            LLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYIDK++ +
Sbjct: 1024 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1083

Query: 1043 YKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYS 1102
            Y MQNSK+GLLP+R+G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYAMLCTRPDICY+
Sbjct: 1084 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1143

Query: 1103 VGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKS 1162
            VG+VSRYQSNPG  HWTAVK ILKYLR T+DY L+YG+KDLILTGYTDSDFQTD+D+RKS
Sbjct: 1144 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1203

Query: 1163 TSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHL 1222
            TSGSVFTLNG AVVWRSIKQ CI DSTMEAEYVA CEAAKE VW R FL DLEVVPNM  
Sbjct: 1204 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1263

Query: 1223 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTK 1282
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDV+VTQI+S  N+ADPFTK
Sbjct: 1264 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1323

Query: 1283 ALTAKVFEGHLHNLGLR 1284
             LTAKVFEGHL +LGLR
Sbjct: 1324 PLTAKVFEGHLESLGLR 1337

BLAST of CSPI04G12000 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 933/1277 (73.06%), Postives = 1083/1277 (84.81%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  RM 
Sbjct: 64   KANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMN 123

Query: 83   EGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT 142
            EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI + LT
Sbjct: 124  EGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLT 183

Query: 143  TLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTP 202
            TLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G+  
Sbjct: 184  TLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGN 243

Query: 203  KQNKG------KKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLV 262
            K N        K  A KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ETCLV
Sbjct: 244  KANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLETCLV 303

Query: 263  EYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDR 322
            E ++  WI+DSGATNH+C SFQ  SSW++L  GE+T++VGTG +VSA AVG L+L  +  
Sbjct: 304  ENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKS 363

Query: 323  YVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRP 382
            +++L+NV  VP +KRNLIS+ C+LEQ Y ++F +N+ F++  G+ +CSA LE+NLY LR 
Sbjct: 364  FLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRS 423

Query: 383  TRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDN 442
              +  +LNTE+F+TA TQNKR K+S   NA+LWHLRLGHINLNRI RLVK+GLLS LE+N
Sbjct: 424  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEEN 483

Query: 443  SLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 502
            SLP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSR
Sbjct: 484  SLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 543

Query: 503  YGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 562
            YG++YL+ HKS +LEKFKEYKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI SQ
Sbjct: 544  YGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQ 603

Query: 563  LSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSET 622
            LSAP TPQQNGVSERRNRTLLDMVRSMMS++ + +SFWGYA++TA YILN VPSKSVSET
Sbjct: 604  LSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSET 663

Query: 623  PYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENK 682
            P +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYDP++NK
Sbjct: 664  PLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNK 723

Query: 683  IFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSGQS 742
            +FVSTNATFLEEDHIR+H+PRSK+VL E+SK         +++PS+ T+VV     S ++
Sbjct: 724  VFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVGSSTRT 783

Query: 743  HPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMD 802
            H  Q LREPRRSGRV + P RY+ L ET  VI D  IEDPLT+K+AM+DVD+D+WIKAM+
Sbjct: 784  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 843

Query: 803  LEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDY 862
            LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 844  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 903

Query: 863  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQ 922
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI   QEQ
Sbjct: 904  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 963

Query: 923  KVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDI 982
            K+CKL +SIYGL+  SRSWNIRFDTAIKSYGF+Q VDEPCVYK+++N  +AFLVLYVDDI
Sbjct: 964  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1023

Query: 983  LLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSR 1042
            LLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYIDK++ +
Sbjct: 1024 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1083

Query: 1043 YKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYS 1102
            Y MQNSK+GLLP+R+G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYAMLCTRPDICY+
Sbjct: 1084 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1143

Query: 1103 VGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKS 1162
            VG+VSRYQSNPG  HWTAVK ILKYLR T+DY L+YG+KDLILTGYTDSDFQTD+D+RKS
Sbjct: 1144 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1203

Query: 1163 TSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHL 1222
            TSGSVFTLNG AVVWRSIKQ CI DSTMEAEYVA CEAAKE VW R FL DLEVVPNM  
Sbjct: 1204 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1263

Query: 1223 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTK 1282
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDV+VTQI+S  N+ADPFTK
Sbjct: 1264 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1323

Query: 1283 ALTAKVFEGHLHNLGLR 1284
             LTAKVFEGHL +LGLR
Sbjct: 1324 PLTAKVFEGHLESLGLR 1337

BLAST of CSPI04G12000 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1857.4 bits (4810), Expect = 0.0e+00
Identity = 923/1265 (72.96%), Postives = 1072/1265 (84.74%), Query Frame = 0

Query: 23   KANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMK 82
            KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+ MFGQ  + ++H+A+KYIY  RM 
Sbjct: 64   KANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMN 123

Query: 83   EGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT 142
            EG SVREHVL+MM+HFN+AE+NG  I+E +QVSFILESLP+SF+ F++NA +NKI + LT
Sbjct: 124  EGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLT 183

Query: 143  TLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTP 202
            TLLNELQ F++L   KG++ EANVAT+ RKF RGS+S TK+ PS   N + KKK  G+  
Sbjct: 184  TLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGN 243

Query: 203  KQNKG------KKGAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLV 262
            K N        K  A KG C+HC Q GHW RNCPKYLAEKK  K  QGKYDLLV+ETCLV
Sbjct: 244  KANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK--KAKQGKYDLLVLETCLV 303

Query: 263  EYENCTWILDSGATNHICFSFQENSSWKKLSEGEITLKVGTGEMVSASAVGDLKLFFRDR 322
            E ++  WI+DSGATNH+C SFQ  SSW++L  GE+T++VGTG +VSA AVG L+L  +  
Sbjct: 304  ENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKS 363

Query: 323  YVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRP 382
            +++L+NV  VP +KRNLIS+ C+LEQ Y ++F +N+ F++  G+ +CSA LE+NLY LR 
Sbjct: 364  FLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRS 423

Query: 383  TRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDN 442
              +  +LNTE+F+TA TQNKR K+S   NA+LWHLRLGHINLNRI RLVK+GLLS LE+N
Sbjct: 424  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEEN 483

Query: 443  SLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSR 502
            SLP CESCLEGKMTKR FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSR
Sbjct: 484  SLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 543

Query: 503  YGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 562
            YG++YL+ HKS +LEKFKEYKAEVEN L KTIK  RSDRGGEYMDL+F++YL+E GI SQ
Sbjct: 544  YGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQ 603

Query: 563  LSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSET 622
            LSAP TPQQNGVSERRNRTLLDMVRSMMS++ + +SFWGYA++TA YILN VPSKSVSET
Sbjct: 604  LSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSET 663

Query: 623  PYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENK 682
            P +LW GRKGSLRHFRIWGCPAHVL  NPKKLE RSKLC F+GYPK +RGG FYDP++NK
Sbjct: 664  PLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNK 723

Query: 683  IFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSGQS 742
            +FVSTNATFLEEDHIR+H+PRSK+VL E+SK         +++PS+ T+VV     S ++
Sbjct: 724  VFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVV-HVGSSTRT 783

Query: 743  HPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMD 802
            H  Q LREPRRSGRV + P RY+ L ET  VI D  IEDPLT+K+AM+DVD+D+WIKAM+
Sbjct: 784  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 843

Query: 803  LEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDY 862
            LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR   GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 844  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 903

Query: 863  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQ 922
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI   QEQ
Sbjct: 904  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 963

Query: 923  KVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDI 982
            K+CKL +SIYGL+  SRSWNIRFDTAIKSYGF+Q VDEPCVYK+++N  +AFLVLYVDDI
Sbjct: 964  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1023

Query: 983  LLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSR 1042
            LLIGND+G LTDIK+WLA QFQMKDLG+AQ+VLGIQI R+RKNK LA+SQASYIDK++ +
Sbjct: 1024 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1083

Query: 1043 YKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYS 1102
            Y MQNSK+GLLP+R+G+ LSKEQCPKTPQ+VE+MR+IPYASAVGSLMYAMLCTRPDICY+
Sbjct: 1084 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1143

Query: 1103 VGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMYGTKDLILTGYTDSDFQTDKDARKS 1162
            VG+VSRYQSNPG  HWTAVK ILKYLR T+DY L+YG+KDLILTGYTDSDFQTD+D+RKS
Sbjct: 1144 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1203

Query: 1163 TSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVWQRKFLTDLEVVPNMHL 1222
            TSGSVFTLNG AVVWRSIKQ CI DSTMEAEYVA CEAAKE VW R FL DLEVVPNM  
Sbjct: 1204 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1263

Query: 1223 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVVVTQISSQQNIADPFTK 1272
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDV+VTQI+S  N+ADPFTK
Sbjct: 1264 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1323

BLAST of CSPI04G12000 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 295.0 bits (754), Expect = 2.8e-79
Identity = 166/484 (34.30%), Postives = 270/484 (55.79%), Query Frame = 0

Query: 764  EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHA 823
            ++P TY +A + +    W  AMD E+ +M     W +   P + KPIGCKW+YK K +  
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 824  GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 883
            G ++ +KARLVAKGYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 884  NGNLEESIYMSQPEGFIEQDQE----QKVCKLKKSIYGLQACSRSWNIRFDTAIKSYGFE 943
            NG+L+E IYM  P G+  +  +      VC LKKSIYGL+  SR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 944  QNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVL 1003
            Q+  +   + K+  ++   +++YVDDI++  N+   + ++K  L   F+++DLG  +Y L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 1004 GIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVED 1063
            G++I R+     + + Q  Y   +L    +   K   +P    +  S      +  +  D
Sbjct: 324  GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVD 383

Query: 1064 MRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYM 1123
             +   Y   +G LMY  + TR DI ++V  +S++   P   H  AV  IL Y++ T    
Sbjct: 384  AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 1124 LMYGTK-DLILTGYTDSDFQTDKDARKSTSGSVFTLNGRAVVWRSIKQICIVDSTMEAEY 1183
            L Y ++ ++ L  ++D+ FQ+ KD R+ST+G    L    + W+S KQ  +  S+ EAEY
Sbjct: 444  LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

Query: 1184 VATCEAAKEPVWQRKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYH 1243
             A   A  E +W  +F  +L++   +  P  L+CDN+ A+  +     H+R KHIE   H
Sbjct: 504  RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 553

BLAST of CSPI04G12000 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-19
Identity = 75/236 (31.78%), Postives = 116/236 (49.15%), Query Frame = 0

Query: 958  FLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQA 1017
            +L+LYVDDILL G+    L  +   L+  F MKDLG   Y LGIQI  +     L +SQ 
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 1018 SYIDKMLSRYKMQNSK--KGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYA 1077
             Y +++L+   M + K     LP +    +S  + P    +  D R+I     VG+L Y 
Sbjct: 62   KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFRSI-----VGALQYL 121

Query: 1078 MLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRSTKDY-MLMYGTKDLILTGYTD 1137
             L TRPDI Y+V +V +    P    +  +K +L+Y++ T  + + ++    L +  + D
Sbjct: 122  TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 1138 SDFQTDKDARKSTSGSVFTLNGRAVVWRSIKQICIVDSTMEAEYVATCEAAKEPVW 1191
            SD+      R+ST+G    L    + W + +Q  +  S+ E EY A    A E  W
Sbjct: 182  SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CSPI04G12000 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 82.0 bits (201), Expect = 3.8e-15
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0

Query: 764 EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHA 823
           ++P +   A+KD     W +AM  E++++  N  W LV  P +   +GCKW++K K    
Sbjct: 26  KEPKSVIFALKD---PGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 85

Query: 824 GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA 867
           G +   KARLVAKG+ Q EG+ + ET+SPV    +IR +L++A
Sbjct: 86  GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

BLAST of CSPI04G12000 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 46.2 bits (108), Expect = 2.3e-04
Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 0

Query: 1079 TRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRSTKDYMLMY-GTKDLILTGYTDSDF 1138
            TRPD+ ++V  +S++ S        AV  +L Y++ T    L Y  T DL L  + DSD+
Sbjct: 6    TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDW 65

Query: 1139 QTDKDARKSTSG 1150
             +  D R+S +G
Sbjct: 66   ASCPDTRRSVTG 77

BLAST of CSPI04G12000 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 3.0e-04
Identity = 26/82 (31.71%), Postives = 46/82 (56.10%), Query Frame = 0

Query: 570 NRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHF 629
           NRT+++ VRSM+    +  +F   A  TA +I+N  PS +++   P E+W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 630 RIWGCPAHVLVQNPKKLEHRSK 651
           R +GC A++   +  KL+ R+K
Sbjct: 62  RRFGCVAYIHC-DEGKLKPRAK 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109784.1e-20835.09Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041464.5e-14627.82Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT941.5e-13027.17Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW23.2e-12826.52Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q993375.4e-3521.49Transposon Ty1-NL2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
Match NameE-valueIdentityDescription
E2GK510.0e+0087.26Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1[more]
A0A5A7SMH80.0e+0073.06Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... [more]
A0A5D3CPJ60.0e+0073.06Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... [more]
A0A5A7TZD70.0e+0073.06Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013... [more]
A0A5A7TWB90.0e+0072.96Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031... [more]
Match NameE-valueIdentityDescription
ADJ18449.10.0e+0087.26gag/pol protein, partial [Bryonia dioica][more]
KAA0048404.10.0e+0073.06gag/pol protein [Cucumis melo var. makuwa][more]
KAA0035879.10.0e+0073.06gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi... [more]
KAA0031826.10.0e+0073.06gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi... [more]
TYK14550.10.0e+0072.96gag/pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT4G23160.12.8e-7934.30cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.5e-1931.78DNA/RNA polymerases superfamily protein [more]
ATMG00820.13.8e-1538.83Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00240.12.3e-0434.72Gag-Pol-related retrotransposon family protein [more]
ATMG00710.13.0e-0431.71Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 23..149
e-value: 5.4E-16
score: 58.6
NoneNo IPR availableGENE3D4.10.60.10coord: 206..249
e-value: 4.4E-7
score: 32.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 709..743
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..212
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 764..1122
coord: 262..710
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1130..1271
e-value: 4.33116E-57
score: 191.528
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 214..230
e-value: 4.8E-4
score: 29.5
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 213..230
e-value: 1.7E-5
score: 24.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 214..230
score: 10.542789
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 455..631
e-value: 6.3E-41
score: 141.8
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 795..1038
e-value: 1.4E-71
score: 240.9
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 460..560
e-value: 1.3E-10
score: 41.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 457..622
score: 24.005817
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 393..446
e-value: 1.7E-12
score: 47.0
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 195..233
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 795..1238
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 456..616

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G12000.1CSPI04G12000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding