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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. AAAAAAAAAAAAAATTAACACGGTTATTTCAACCCAAAATCAAAAACCCAGATGCGAAAAGCATCGAAGGATGCAGAAATACGATCTGGTTCGGTCTTTATAAAGCAGGGGAATCAAAAACTGAAGAGAAATGGAAATGGGGTTCGTTGAAAAAGGAGAAATCAGAGACGAACAAGTAACAAGAACCGAAGAAAAGGTAACAAGTCAGGAAGAAGAAGAAGGAGATGAGGATGAAAGAACAGAAAAAGGAAGTGGAATAAGAAAATATTATATAGAAAGAAGAGGAGAGGAGAAAGAAAGGAAAACCGGGGGCCATTTGGAACAGGAGGAATTGCTTGAGTAGAATGACAATACATTGTGAGATGGGGGGAGAGAAATAAGAATGTAAAAAGAAAAAAAATAAAAAAAGTGGATAAAATAAAGAGAAAAATGGAAGAAAGAGAGAAATCTGCTTGGAGAGGTTGGGTGGCCGCCCCTAAGATTGAGAATAAACTGGTGGTATACAGAACCTGGTTTGGGGATTTGGAAACAAGGTACTAGTGATAAAGTTTGACTGTTGTAGCCCTAACAATGGCGGATTTGTTGCATGGGTATGAATAGAGGAGT mRNA sequence AAAAAAAAAAAAAATTAACACGGTTATTTCAACCCAAAATCAAAAACCCAGATGCGAAAAGCATCGAAGGATGCAGAAATACGATCTGGTTCGGTCTTTATAAAGCAGGGGAATCAAAAACTGAAGAGAAATGGAAATGGGGTTCGTTGAAAAAGGAGAAATCAGAGACGAACAAGTAACAAGAACCGAAGAAAAGGTAACAAGTCAGGAAGAAGAAGAAGGAGATGAGGATGAAAGAACAGAAAAAGGAAGTGGAATAAGAAAATATTATATAGAAAGAAGAGGAGAGGAGAAAGAAAGGAAAACCGGGGGCCATTTGGAACAGGAGGAATTGCTTGAGTAGAATGACAATACATTGTGAGATGGGGGGAGAGAAATAAGAATGTAAAAAGAAAAAAAATAAAAAAAGTGGATAAAATAAAGAGAAAAATGGAAGAAAGAGAGAAATCTGCTTGGAGAGGTTGGGTGGCCGCCCCTAAGATTGAGAATAAACTGGTGGTATACAGAACCTGGTTTGGGGATTTGGAAACAAGGTACTAGTGATAAAGTTTGACTGTTGTAGCCCTAACAATGGCGGATTTGTTGCATGGGTATGAATAGAGGAGT Coding sequence (CDS) ATGGAAATGGGGTTCGTTGAAAAAGGAGAAATCAGAGACGAACAAGTAACAAGAACCGAAGAAAAGGTAACAAGTCAGGAAGAAGAAGAAGGAGATGAGGATGAAAGAACAGAAAAAGGAAGTGGAATAAGAAAATATTATATAGAAAGAAGAGGAGAGGAGAAAGAAAGGAAAACCGGGGGCCATTTGGAACAGGAGGAATTGCTTGAGTAG Protein sequence MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTGGHLEQEELLE*
Homology
BLAST of CSPI04G11030 vs. ExPASy TrEMBL
Match: A0A0A0KYK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188420 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTG 60
MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTG
Sbjct: 1 MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTG 60
Query: 61 GHLEQEELLE 71
GHLEQEELLE
Sbjct: 61 GHLEQEELLE 70
BLAST of CSPI04G11030 vs. NCBI nr
Match: KGN53914.1 (hypothetical protein Csa_019171 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTG 60
MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTG
Sbjct: 1 MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTG 60
Query: 61 GHLEQEELLE 71
GHLEQEELLE
Sbjct: 61 GHLEQEELLE 70
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KYK2 | 1.0e-26 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188420 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN53914.1 | 2.1e-26 | 100.00 | hypothetical protein Csa_019171 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 36..70 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..70 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..25 |
Relationships
The following mRNA feature(s) are a part of this gene:
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