CSPI04G10650 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G10650
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Spc97 / Spc98 family of spindle pole body (SBP) component
Location	Chr4: 8890607 .. 8891011 (-)
RNA-Seq Expression	CSPI04G10650
Synteny	CSPI04G10650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGCGAATGAAATTTTGAAGAATAAAAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAGTTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGATGCAACGAGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCGAGTATCTGCTCGGACAGAAGGAAGAAACCAGGAAAAAGGCCACGGGAAAAGGTTGATTCGAGATACAAGAACGACAAGTTGTGA

mRNA sequence

ATGGAAGAGGCGAATGAAATTTTGAAGAATAAAAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAGTTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGATGCAACGAGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCGAGTATCTGCTCGGACAGAAGGAAGAAACCAGGAAAAAGGCCACGGGAAAAGGTTGATTCGAGATACAAGAACGACAAGTTGTGA

Coding sequence (CDS)

ATGGAAGAGGCGAATGAAATTTTGAAGAATAAAAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAGTTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGATGCAACGAGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCGAGTATCTGCTCGGACAGAAGGAAGAAACCAGGAAAAAGGCCACGGGAAAAGGTTGATTCGAGATACAAGAACGACAAGTTGTGA

Protein sequence

MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKRPREKVDSRYKNDKL*

Homology

[Close]

BLAST of CSPI04G10650 vs. ExPASy TrEMBL
Match: A0A0A0KW48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.8e-62
Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKNKRIE ISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA
Sbjct: 180 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 239

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 240 IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 299

Query: 121 PREKVDSRY-KNDKL 135
           P+EKVDSRY KNDKL
Sbjct: 300 PQEKVDSRYKKNDKL 314

[Close]

BLAST of CSPI04G10650 vs. ExPASy TrEMBL
Match: A0A0A0LBP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633280 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.7e-56
Identity = 119/132 (90.15%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKNKRIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RA
Sbjct: 59  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 118

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 119 IGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 178

Query: 121 PREKVDSRYKND 133
            REKVD  YK +
Sbjct: 179 SREKVDLSYKKN 190

[Close]

BLAST of CSPI04G10650 vs. ExPASy TrEMBL
Match: A0A1S3CBX7 (uncharacterized protein LOC103499220 OS=Cucumis melo OX=3656 GN=LOC103499220 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.3e-54
Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKN RIEDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  R 
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRT 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKGELRTSDV+DLSQSALNACNLLDSNLEK L IDEIM SIC DRRKKPGKR
Sbjct: 61  IGFVLMEHLKGELRTSDVTDLSQSALNACNLLDSNLEKSLPIDEIMTSICLDRRKKPGKR 120

Query: 121 PREKVD 127
           PREKVD
Sbjct: 121 PREKVD 126

[Close]

BLAST of CSPI04G10650 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.2e-54
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKN R+EDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRE 124
           RPR+
Sbjct: 121 RPRK 124

[Close]

BLAST of CSPI04G10650 vs. ExPASy TrEMBL
Match: A0A5A7UQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001160 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKN R+EDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 60  MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 119

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 120 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 179

Query: 121 RPRE 124
           R ++
Sbjct: 180 RGKK 183

[Close]

BLAST of CSPI04G10650 vs. NCBI nr
Match: KGN53863.2 (hypothetical protein Csa_019174 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKNKRIE ISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA
Sbjct: 135 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 194

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 195 IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 254

Query: 121 PREKVDSRY-KNDKL 135
           P+EKVDSRY KNDKL
Sbjct: 255 PQEKVDSRYKKNDKL 269

[Close]

BLAST of CSPI04G10650 vs. NCBI nr
Match: XP_011653427.1 (uncharacterized protein LOC105435221 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKNKRIE ISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA
Sbjct: 1   MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120

Query: 121 PREKVDSRY-KNDKL 135
           P+EKVDSRY KNDKL
Sbjct: 121 PQEKVDSRYKKNDKL 135

[Close]

BLAST of CSPI04G10650 vs. NCBI nr
Match: XP_011651663.2 (uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651665.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651666.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651667.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738444.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738445.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738446.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738447.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738449.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738450.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738451.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738452.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738453.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738454.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738455.1 uncharacterized protein LOC101210446 [Cucumis sativus] >KAE8650857.1 hypothetical protein Csa_002034 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 8.2e-56
Identity = 119/132 (90.15%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKN RIEDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RA
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 61  IGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120

Query: 121 PREKVDSRYKND 133
            REKVD  YK +
Sbjct: 121 SREKVDLSYKKN 132

[Close]

BLAST of CSPI04G10650 vs. NCBI nr
Match: XP_008460383.1 (PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460384.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460385.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460387.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460388.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460389.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460390.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_016902549.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54
Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKN RIEDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  R 
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRT 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKGELRTSDV+DLSQSALNACNLLDSNLEK L IDEIM SIC DRRKKPGKR
Sbjct: 61  IGFVLMEHLKGELRTSDVTDLSQSALNACNLLDSNLEKSLPIDEIMTSICLDRRKKPGKR 120

Query: 121 PREKVD 127
           PREKVD
Sbjct: 121 PREKVD 126

[Close]

BLAST of CSPI04G10650 vs. NCBI nr
Match: XP_008450999.1 (PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEEANEILKN R+EDISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRE 124
           RPR+
Sbjct: 121 RPRK 124

[Close]

BLAST of CSPI04G10650 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEE  +ILKN R +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDSNLEKILSIDEIMASICSDRR 120
           +G VLMEH +   R  + + L+ S       L+ CNLL ++++  + I+EI+  IC ++ 
Sbjct: 61  LGLVLMEHAR--KRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKS 120

Query: 121 KKPGKRPR 123
           KK  ++ R
Sbjct: 121 KKKARKRR 126

[Close]

BLAST of CSPI04G10650 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEE  +ILKN R +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDSNLEKILSIDEIMASICSDRR 120
           +G VLMEH +   R  + + L+ S       L+ CNLL ++++  + I+EI+  IC ++ 
Sbjct: 61  LGLVLMEHAR--KRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKS 120

Query: 121 KKPGKRPR 123
           KK  ++ R
Sbjct: 121 KKKARKRR 126

[Close]

BLAST of CSPI04G10650 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60
           MEE  +ILKN R +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDSNLEKILSIDEIMASICSDRR 120
           +G VLMEH +   R  + + L+ S       L+ CNLL ++++  + I+EI+  IC ++ 
Sbjct: 61  LGLVLMEHAR--KRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKS 120

Query: 121 KKPGKRPR 123
           KK  ++ R
Sbjct: 121 KKKARKRR 126

[Close]

BLAST of CSPI04G10650 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 64/130 (49.23%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQR 60
           MEE ++ILKN R +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLKM R
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDSNLEKILSIDEIMASICSDR 120
           ++G VLME+++   R  D + L+ S       L++CNLL ++++  + I+EI+  IC+ +
Sbjct: 61  SLGLVLMEYVR--KRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKK 120

Query: 121 -RKKPGKRPR 123
            +KK  KR R
Sbjct: 121 SKKKTRKRSR 128

[Close]

BLAST of CSPI04G10650 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 64/130 (49.23%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 1   MEEANEILKNKRIEDISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQR 60
           MEE ++ILKN R +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLKM R
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDSNLEKILSIDEIMASICSDR 120
           ++G VLME+++   R  D + L+ S       L++CNLL ++++  + I+EI+  IC+ +
Sbjct: 61  SLGLVLMEYVR--KRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKK 120

Query: 121 -RKKPGKRPR 123
            +KK  KR R
Sbjct: 121 SKKKTRKRSR 128

The following BLAST results are available for this feature:

BLAST of CSPI04G10650 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G10650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW48	4.8e-62	97.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=3 SV=1	[more]
A0A0A0LBP9	6.7e-56	90.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633280 PE=4 SV=1	[more]
A0A1S3CBX7	1.3e-54	92.06	uncharacterized protein LOC103499220 OS=Cucumis melo OX=3656 GN=LOC103499220 PE=...	[more]
A0A1S3BQH9	8.2e-54	93.55	uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=...	[more]
A0A5A7UQA1	2.0e-52	91.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CSPI04G10650 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53863.2	1.0e-61	97.78	hypothetical protein Csa_019174 [Cucumis sativus]	[more]
XP_011653427.1	1.0e-61	97.78	uncharacterized protein LOC105435221 [Cucumis sativus]	[more]
XP_011651663.2	8.2e-56	90.15	uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651665.2 uncharact...	[more]
XP_008460383.1	2.6e-54	92.06	PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460384.1 P...	[more]
XP_008450999.1	1.7e-53	93.55	PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo]	[more]

BLAST of CSPI04G10650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80245.1	3.2e-26	47.66	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.2	3.2e-26	47.66	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.3	3.2e-26	47.66	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT4G00695.1	1.8e-24	49.23	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]
AT4G00695.2	1.8e-24	49.23	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..134
None	No IPR available	PANTHER	PTHR48237	GAMMA-TUBULIN COMPLEX COMPONENT	coord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G10650.1	CSPI04G10650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005319	lipid transporter activity