CSPI04G10640 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G10640
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein of unknown function (DUF1138)
Location	Chr4: 8889369 .. 8889743 (-)
RNA-Seq Expression	CSPI04G10640
Synteny	CSPI04G10640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCAAATACATAGTAGGTTCTTTACTTGGAGCATGTGGAGTTGCATATATTTGTGACCATCTTATTTCTGACAAGAAAATATTTGGAGGTAACTATCGGCCTGGTCTCACAGTTTCTTTGATCTGCTACCGTTGCTTGGCTTTGCCATTTCTTTGATGTACCTCCATTTCTCTAATTTCTTAATGTCTCTTTCTTTTCAATGGATTTCTTTCTTGTTCAGGAACAACTCCAAGTACTGTTTCAAACAGCGAGTGGTTGGAAGAAACTGACAAAAAATTCCAAGCATGGCCTCGTACAGCCGGTCCACCTGTAGTCATGAACCCCATCAGTCGCCAAAATTTCATCGTCAAAACCCGCCCTGAATCTTAA

mRNA sequence

ATGGCAGCCAAATACATAGTAGGTTCTTTACTTGGAGCATGTGGAGTTGCATATATTTGTGACCATCTTATTTCTGACAAGAAAATATTTGGAGGAACAACTCCAAGTACTGTTTCAAACAGCGAGTGGTTGGAAGAAACTGACAAAAAATTCCAAGCATGGCCTCGTACAGCCGGTCCACCTGTAGTCATGAACCCCATCAGTCGCCAAAATTTCATCGTCAAAACCCGCCCTGAATCTTAA

Coding sequence (CDS)

ATGGCAGCCAAATACATAGTAGGTTCTTTACTTGGAGCATGTGGAGTTGCATATATTTGTGACCATCTTATTTCTGACAAGAAAATATTTGGAGGAACAACTCCAAGTACTGTTTCAAACAGCGAGTGGTTGGAAGAAACTGACAAAAAATTCCAAGCATGGCCTCGTACAGCCGGTCCACCTGTAGTCATGAACCCCATCAGTCGCCAAAATTTCATCGTCAAAACCCGCCCTGAATCTTAA

Protein sequence

MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPES*

Homology

[Close]

BLAST of CSPI04G10640 vs. ExPASy TrEMBL
Match: A0A0A0KYC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166930 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.5e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRPES 81
          PVVMNPISRQNFIVKTRPES
Sbjct: 61 PVVMNPISRQNFIVKTRPES 80

[Close]

BLAST of CSPI04G10640 vs. ExPASy TrEMBL
Match: A0A5A7UM13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00430 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.2e-33
Identity = 72/77 (93.51%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MAAKYIVGSLLGA  VAYI DHLISDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGATAVAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTR 78
          PVVMNPISRQNFIVK+R
Sbjct: 61 PVVMNPISRQNFIVKSR 77

[Close]

BLAST of CSPI04G10640 vs. ExPASy TrEMBL
Match: A0A1S3CSQ7 (uncharacterized protein LOC103504527 OS=Cucumis melo OX=3656 GN=LOC103504527 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.2e-33
Identity = 72/77 (93.51%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MAAKYIVGSLLGA  VAYI DHLISDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGATAVAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTR 78
          PVVMNPISRQNFIVK+R
Sbjct: 61 PVVMNPISRQNFIVKSR 77

[Close]

BLAST of CSPI04G10640 vs. ExPASy TrEMBL
Match: A0A6J1EBA8 (uncharacterized protein LOC111432556 OS=Cucurbita moschata OX=3662 GN=LOC111432556 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MA+KY+  SL+G   +AYI D+L+SDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MASKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRPES 81
          PVVMNPISRQNFIVKTRPE+
Sbjct: 61 PVVMNPISRQNFIVKTRPEA 80

[Close]

BLAST of CSPI04G10640 vs. ExPASy TrEMBL
Match: A0A6J1HPI7 (uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.5e-31
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MAAKY+  SL+G   +AYI D+L+SDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRPES 81
          PVVMNPISRQNFIVKTR E+
Sbjct: 61 PVVMNPISRQNFIVKTRSEA 80

[Close]

BLAST of CSPI04G10640 vs. NCBI nr
Match: XP_004149394.1 (uncharacterized protein LOC101213065 [Cucumis sativus] >XP_011653428.1 uncharacterized protein LOC101213065 [Cucumis sativus] >XP_011653429.1 uncharacterized protein LOC101213065 [Cucumis sativus] >XP_031739913.1 uncharacterized protein LOC101213065 [Cucumis sativus] >KGN53849.1 hypothetical protein Csa_019165 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 9.3e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRPES 81
          PVVMNPISRQNFIVKTRPES
Sbjct: 61 PVVMNPISRQNFIVKTRPES 80

[Close]

BLAST of CSPI04G10640 vs. NCBI nr
Match: XP_008467091.1 (PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo] >KAA0043508.1 uncharacterized protein E6C27_scaffold335G00010 [Cucumis melo var. makuwa] >KAA0056128.1 uncharacterized protein E6C27_scaffold697G00060 [Cucumis melo var. makuwa] >TYK02516.1 uncharacterized protein E5676_scaffold784G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 1.7e-32
Identity = 72/77 (93.51%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MAAKYIVGSLLGA  VAYI DHLISDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGATAVAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTR 78
          PVVMNPISRQNFIVK+R
Sbjct: 61 PVVMNPISRQNFIVKSR 77

[Close]

BLAST of CSPI04G10640 vs. NCBI nr
Match: XP_038883759.1 (uncharacterized protein LOC120074644 [Benincasa hispida] >XP_038883760.1 uncharacterized protein LOC120074644 [Benincasa hispida])

HSP 1 Score: 147.1 bits (370), Expect = 6.4e-32
Identity = 70/80 (87.50%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MAAKYIVGSLLGA  +AYI DHLI+DKKIFGGTTPSTVSN EW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGATALAYISDHLIADKKIFGGTTPSTVSNREWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRPES 81
          PVVMNPISRQNFIVK R E+
Sbjct: 61 PVVMNPISRQNFIVKARSEA 80

[Close]

BLAST of CSPI04G10640 vs. NCBI nr
Match: XP_023517179.1 (uncharacterized protein LOC111781016 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MAAKY+  SL+G   +AYI D+L+SDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYVTASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRPES 81
          PVVMNPISRQNFIVKTRPE+
Sbjct: 61 PVVMNPISRQNFIVKTRPEA 80

[Close]

BLAST of CSPI04G10640 vs. NCBI nr
Match: XP_022925267.1 (uncharacterized protein LOC111432556 [Cucurbita moschata] >KAG7027625.1 hypothetical protein SDJN02_11640 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145.2 bits (365), Expect = 2.4e-31
Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60
          MA+KY+  SL+G   +AYI D+L+SDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MASKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRPES 81
          PVVMNPISRQNFIVKTRPE+
Sbjct: 61 PVVMNPISRQNFIVKTRPEA 80

[Close]

BLAST of CSPI04G10640 vs. TAIR 10
Match: AT1G01170.1 (Protein of unknown function (DUF1138) )

HSP 1 Score: 133.3 bits (334), Expect = 9.0e-32
Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 3  AKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGPPV 62
          AKYI+G+L+G+ G++YI D +ISD KIFGGTTP TVSN EW   TD+KFQAWPRTAGPPV
Sbjct: 7  AKYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPV 66

Query: 63 VMNPISRQNFIVKTRPE 80
          VMNPISRQNFIVKTRPE
Sbjct: 67 VMNPISRQNFIVKTRPE 83

[Close]

BLAST of CSPI04G10640 vs. TAIR 10
Match: AT1G01170.2 (Protein of unknown function (DUF1138) )

HSP 1 Score: 133.3 bits (334), Expect = 9.0e-32
Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 3  AKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGPPV 62
          AKYI+G+L+G+ G++YI D +ISD KIFGGTTP TVSN EW   TD+KFQAWPRTAGPPV
Sbjct: 7  AKYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPV 66

Query: 63 VMNPISRQNFIVKTRPE 80
          VMNPISRQNFIVKTRPE
Sbjct: 67 VMNPISRQNFIVKTRPE 83

[Close]

BLAST of CSPI04G10640 vs. TAIR 10
Match: AT4G00860.1 (Protein of unknown function (DUF1138) )

HSP 1 Score: 120.6 bits (301), Expect = 6.0e-28
Identity = 52/77 (67.53%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 3  AKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGPPV 62
          A YI+G+L G+  VAY+CD +ISD K+FGGTTP T++N EW   T+++ QAWPR AGPPV
Sbjct: 4  ATYIIGALAGSAVVAYVCDKVISDDKLFGGTTPGTITNKEWGAATEERLQAWPRVAGPPV 63

Query: 63 VMNPISRQNFIVKTRPE 80
          VMNPISRQNFIVK+RPE
Sbjct: 64 VMNPISRQNFIVKSRPE 80

The following BLAST results are available for this feature:

BLAST of CSPI04G10640 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G10640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYC7	4.5e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166930 PE=4 SV=1	[more]
A0A5A7UM13	8.2e-33	93.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CSQ7	8.2e-33	93.51	uncharacterized protein LOC103504527 OS=Cucumis melo OX=3656 GN=LOC103504527 PE=...	[more]
A0A6J1EBA8	1.2e-31	82.50	uncharacterized protein LOC111432556 OS=Cucurbita moschata OX=3662 GN=LOC1114325...	[more]
A0A6J1HPI7	4.5e-31	82.50	uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138...	[more]

BLAST of CSPI04G10640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149394.1	9.3e-39	100.00	uncharacterized protein LOC101213065 [Cucumis sativus] >XP_011653428.1 uncharact...	[more]
XP_008467091.1	1.7e-32	93.51	PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo] >KAA0043508.1 unc...	[more]
XP_038883759.1	6.4e-32	87.50	uncharacterized protein LOC120074644 [Benincasa hispida] >XP_038883760.1 unchara...	[more]
XP_023517179.1	1.1e-31	83.75	uncharacterized protein LOC111781016 [Cucurbita pepo subsp. pepo]	[more]
XP_022925267.1	2.4e-31	82.50	uncharacterized protein LOC111432556 [Cucurbita moschata] >KAG7027625.1 hypothet...	[more]

BLAST of CSPI04G10640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01170.1	9.0e-32	77.92	Protein of unknown function (DUF1138)	[more]
AT1G01170.2	9.0e-32	77.92	Protein of unknown function (DUF1138)	[more]
AT4G00860.1	6.0e-28	67.53	Protein of unknown function (DUF1138)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009515	Protein of unknown function DUF1138	PFAM	PF06592	DUF1138	coord: 3..75 e-value: 8.4E-44 score: 147.5
IPR009515	Protein of unknown function DUF1138	PANTHER	PTHR34267	OS11G0161033 PROTEIN	coord: 1..78
None	No IPR available	PANTHER	PTHR34267:SF1	OS11G0161033 PROTEIN	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G10640.1	CSPI04G10640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane