CSPI04G10570 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G10570
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr4: 8787357 .. 8787728 (+)
RNA-Seq Expression	CSPI04G10570
Synteny	CSPI04G10570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTCAAAACATTTCTACCCTCCTAATTGTTTGTGTTGTTTTTGGAATTGTCTTTAGCCATACAGGCGTAGTTGATGCAACTCGAGTGCTCTTAGGGTCTGGACCAAGTCCAGGCGGTCCAGGACATGGTACAAAACCTCCAGTTGATCCATATACGTTCAAAGCAAAGGAAAGCGTCAAACCATGGCTTGAAAACTTAGGTTCTGGACCAAGTCCAGGCGGTCCAGGACATGGTACAAAACCTCCAGTTGATCCATATACGTTCAAAGCAAAGGAAAGCGTCAAACCATGGCTTGAAAACTTAGGTTCTGGACCAAGTCCAGGCGGTCCAGGACACGGCACAAAACCTCCAGCACACGTCGCCTAG

mRNA sequence

ATGAAGTTTCAAAACATTTCTACCCTCCTAATTGTTTGTGTTGTTTTTGGAATTGTCTTTAGCCATACAGGCGTAGTTGATGCAACTCGAGTGCTCTTAGGGTCTGGACCAAGTCCAGGCGGTCCAGGACATGGTACAAAACCTCCAGTTGATCCATATACGTTCAAAGCAAAGGAAAGCGTCAAACCATGGCTTGAAAACTTAGGTTCTGGACCAAGTCCAGGCGGTCCAGGACATGGTACAAAACCTCCAGTTGATCCATATACGTTCAAAGCAAAGGAAAGCGTCAAACCATGGCTTGAAAACTTAGGTTCTGGACCAAGTCCAGGCGGTCCAGGACACGGCACAAAACCTCCAGCACACGTCGCCTAG

Coding sequence (CDS)

ATGAAGTTTCAAAACATTTCTACCCTCCTAATTGTTTGTGTTGTTTTTGGAATTGTCTTTAGCCATACAGGCGTAGTTGATGCAACTCGAGTGCTCTTAGGGTCTGGACCAAGTCCAGGCGGTCCAGGACATGGTACAAAACCTCCAGTTGATCCATATACGTTCAAAGCAAAGGAAAGCGTCAAACCATGGCTTGAAAACTTAGGTTCTGGACCAAGTCCAGGCGGTCCAGGACATGGTACAAAACCTCCAGTTGATCCATATACGTTCAAAGCAAAGGAAAGCGTCAAACCATGGCTTGAAAACTTAGGTTCTGGACCAAGTCCAGGCGGTCCAGGACACGGCACAAAACCTCCAGCACACGTCGCCTAG

Protein sequence

MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPPAHVA*

Homology

[Close]

BLAST of CSPI04G10570 vs. ExPASy TrEMBL
Match: A0A0A0L125 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.6e-64
Identity = 119/123 (96.75%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTFKAKES 60
           MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPP DPYTFKAKE 
Sbjct: 1   MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPADPYTFKAKER 60

Query: 61  VKPWLENLGSGPSPGGPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPPA 120
           VKPWLENLGSGPSPGGPGHGTKPP DPYTFKAKE VKPWLENLGSGPSPGGPGHGTKPPA
Sbjct: 61  VKPWLENLGSGPSPGGPGHGTKPPADPYTFKAKERVKPWLENLGSGPSPGGPGHGTKPPA 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CSPI04G10570 vs. ExPASy TrEMBL
Match: A0A5A7TL44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00460 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.6e-14
Identity = 51/87 (58.62%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTF---KA 60
          MKFQ I+ LLI+CVVFGIVFSH G VDA R+L     S           +D Y+    KA
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARML-----SETLRDDHDVDCIDSYSIDHHKA 60

Query: 61 KESVKPWLENLGSGPSPGGPGHGTKPP 85
          K+SVK WLENL SGPSP GPGHGT+PP
Sbjct: 61 KDSVKCWLENLESGPSPKGPGHGTRPP 82

[Close]

BLAST of CSPI04G10570 vs. ExPASy TrEMBL
Match: A0A5D3BS33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00050 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.9e-14
Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTF---KA 60
          MKFQ I+ LLI+C+VFGIVFSH G VDA R+L     S           +D Y+    KA
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARML-----SETLRDDHDVDCIDSYSIDHHKA 60

Query: 61 KESVKPWLENLGSGPSPGGPGHGTKPP 85
          K+SVK WLENL SGPSP GPGHGT+PP
Sbjct: 61 KDSVKCWLENLESGPSPKGPGHGTRPP 82

[Close]

BLAST of CSPI04G10570 vs. ExPASy TrEMBL
Match: A0A5A7TJV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00490 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 7.7e-14
Identity = 54/89 (60.67%), Postives = 60/89 (67.42%), Query Frame = 0


Query: 1  MKFQNISTLLIVCVVFGIVFSH--TGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTF--- 60
          MKFQ I+ LLIVCVVFGIVFSH   G VDA R+L  +        H     VDPY+    
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRD----DHDV-DCVDPYSIDHH 60

Query: 61 KAKESVKPWLENLGSGPSPGGPGHGTKPP 85
          KAK+SVK WLENLGSGPS  GPGHGT+PP
Sbjct: 61 KAKDSVKCWLENLGSGPSLKGPGHGTRPP 84

[Close]

BLAST of CSPI04G10570 vs. ExPASy TrEMBL
Match: A0A0A0KTV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.4e-12
Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1  MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTF---KA 60
          MKFQ I+TLLIVCV+ G+V S   V DA R+LL   P      HG    +DPY+    KA
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVADAARILLSETPR-DDHDHGVDYHIDPYSIVYQKA 61

Query: 61 KESVKPWLENLGSGPSPGGPGH 80
          KES+  WL  L SGPSP GPGH
Sbjct: 62 KESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of CSPI04G10570 vs. NCBI nr
Match: XP_031739745.1 (basic proline-rich protein-like [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTFKAKES 60
           MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTFKAKES
Sbjct: 1   MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTFKAKES 60

Query: 61  VKPWLENLGSGPSPGGPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPP 120
           VKPWLENLGSGPSPGGPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPP
Sbjct: 61  VKPWLENLGSGPSPGGPGHGTKPPVDPYTFKAKESVKPWLENLGSGPSPGGPGHGTKPP 119

[Close]

BLAST of CSPI04G10570 vs. NCBI nr
Match: KAA0043548.1 (hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 5.4e-14
Identity = 51/87 (58.62%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTF---KA 60
          MKFQ I+ LLI+CVVFGIVFSH G VDA R+L     S           +D Y+    KA
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARML-----SETLRDDHDVDCIDSYSIDHHKA 60

Query: 61 KESVKPWLENLGSGPSPGGPGHGTKPP 85
          K+SVK WLENL SGPSP GPGHGT+PP
Sbjct: 61 KDSVKCWLENLESGPSPKGPGHGTRPP 82

[Close]

BLAST of CSPI04G10570 vs. NCBI nr
Match: TYK02483.1 (hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTF---KA 60
          MKFQ I+ LLI+C+VFGIVFSH G VDA R+L     S           +D Y+    KA
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARML-----SETLRDDHDVDCIDSYSIDHHKA 60

Query: 61 KESVKPWLENLGSGPSPGGPGHGTKPP 85
          K+SVK WLENL SGPSP GPGHGT+PP
Sbjct: 61 KDSVKCWLENLESGPSPKGPGHGTRPP 82

[Close]

BLAST of CSPI04G10570 vs. NCBI nr
Match: KAA0043550.1 (hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-13
Identity = 54/89 (60.67%), Postives = 60/89 (67.42%), Query Frame = 0


Query: 1  MKFQNISTLLIVCVVFGIVFSH--TGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTF--- 60
          MKFQ I+ LLIVCVVFGIVFSH   G VDA R+L  +        H     VDPY+    
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRD----DHDV-DCVDPYSIDHH 60

Query: 61 KAKESVKPWLENLGSGPSPGGPGHGTKPP 85
          KAK+SVK WLENLGSGPS  GPGHGT+PP
Sbjct: 61 KAKDSVKCWLENLGSGPSLKGPGHGTRPP 84

[Close]

BLAST of CSPI04G10570 vs. NCBI nr
Match: KGN53025.1 (hypothetical protein Csa_015299 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-11
Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1  MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPVDPYTF---KA 60
          MKFQ I+TLLIVCV+ G+V S   V DA R+LL   P      HG    +DPY+    KA
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVADAARILLSETPR-DDHDHGVDYHIDPYSIVYQKA 61

Query: 61 KESVKPWLENLGSGPSPGGPGH 80
          KES+  WL  L SGPSP GPGH
Sbjct: 62 KESISCWLGKLSSGPSPSGPGH 82

The following BLAST results are available for this feature:

BLAST of CSPI04G10570 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G10570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L125	3.6e-64	96.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1	[more]
A0A5A7TL44	2.6e-14	58.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BS33	5.9e-14	57.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TJV8	7.7e-14	60.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KTV4	9.4e-12	53.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1	[more]

BLAST of CSPI04G10570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739745.1	1.7e-63	100.00	basic proline-rich protein-like [Cucumis sativus]	[more]
KAA0043548.1	5.4e-14	58.62	hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa]	[more]
TYK02483.1	1.2e-13	57.47	hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa]	[more]
KAA0043550.1	1.6e-13	60.67	hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa]	[more]
KGN53025.1	1.9e-11	53.66	hypothetical protein Csa_015299 [Cucumis sativus]	[more]

BLAST of CSPI04G10570 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..123
None	No IPR available	PANTHER	PTHR37245:SF4	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 83..114
None	No IPR available	PANTHER	PTHR37245:SF4	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..79
IPR040273	PAMP-induced secreted peptide 1	PANTHER	PTHR37245	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..79 coord: 83..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G10570.1	CSPI04G10570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response