
CSPI04G10300 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGAAGAATTCAATGCTCTTCAAGCACAAGGTACTTGGTCTTTAGTCCTTTGCCATCCATCCATGAATATTGTTGGTTGTAAGTGGGTCTTTCGCACCAAATATAATCATGATGGCTCAATTGCTCGCCACAAAGCACGCCTAGTTGCCAAAGGGTATCACCAGGTACAAGGTTTTGATTTTGATGAAACTTTTGTCATGTTGTCGAAAGGTCTACTATACAAATTATTCTTGCTCTAGCTGCTCAATACAATTGGTCATTGACACATTTAGATGTCAAAAATGCCCTCTTCATGGTGTTTTTCGGGAAACAGTATATATCTCTCAACCTACTTGTTTTCATGACAAAAAATTTCCAAACCATATGTGTCTTCTACACAAGAGTCTTTATGGCTTCAAACAAGCCCCTCGTACTTGGTTTGAACGCTTTACCTCTTATCTATTTACTCTGGGTTCTGTTGCTTCAAAGGTTGATCCATCATTATTCATTTGATATGTTGGATCTTCTTTTACTTACTTACTCATGTATGTTTATGATATTATTGTCAATGGCCCAAACTCCTCTTATATTTCTCTTCTAAAAAACCAATTGGCACTTGTTCAAAATATCTGATCTTGGTTCTTTAAAGTATTTTCTTGGTTTCGAAATACAATTCTCCACTAATGGCATTTTTGTCAACCAAGCAACATATCTCAATGATCTCCTTCACACATCAGAAATGACCTCTGTAAAATCTTGCACAACACCAATGTCTACCTCTCTTGACCTCTTCACCAGTGCGCCCCCTTTTAATGATCCCTTCTTTATACCGCAAAATTGTTGGTTCCTTACAATATCTTACATTTACTCACTTGATATATCACTTTCTCCGTAAATCGTGTTAGCCAATTCATGCACAAACCAACAATCATTCATTTTTCTGCAGTCAAACGCATCCTTCAATATTTATGTGGTACTCCCACCCTTGGAGTACATTTTCTCAAAGGTTCGTTCTCTCTCCAAACCTTTTGTGACTCTGATTGGGTAGGTGATACTTCTTACCGATGATCCACCTCAGGATTCATTGCCTTCATCGGCTCTAATCTAG ATGTGTGAAGAATTCAATGCTCTTCAAGCACAAGGTACTTGGTCTTTAGTCCTTTGCCATCCATCCATGAATATTGTTGGTTGTAAGTGGGTCTTTCGCACCAAATATAATCATGATGGCTCAATTGCTCGCCACAAAGCACGCCTAGTTGCCAAAGGGTATCACCAGAGTCTTTATGGCTTCAAACAAGCCCCTCGTACTTGGTTTGAACGCTTTACCTCTTATCTATTTACTCTGGGTTCTGTTGCTTCAAAGTCAAACGCATCCTTCAATATTTATGTGGTACTCCCACCCTTGGAGTACATTTTCTCAAAGGTGATACTTCTTACCGATGATCCACCTCAGGATTCATTGCCTTCATCGGCTCTAATCTAG ATGTGTGAAGAATTCAATGCTCTTCAAGCACAAGGTACTTGGTCTTTAGTCCTTTGCCATCCATCCATGAATATTGTTGGTTGTAAGTGGGTCTTTCGCACCAAATATAATCATGATGGCTCAATTGCTCGCCACAAAGCACGCCTAGTTGCCAAAGGGTATCACCAGAGTCTTTATGGCTTCAAACAAGCCCCTCGTACTTGGTTTGAACGCTTTACCTCTTATCTATTTACTCTGGGTTCTGTTGCTTCAAAGTCAAACGCATCCTTCAATATTTATGTGGTACTCCCACCCTTGGAGTACATTTTCTCAAAGGTGATACTTCTTACCGATGATCCACCTCAGGATTCATTGCCTTCATCGGCTCTAATCTAG MCEEFNALQAQGTWSLVLCHPSMNIVGCKWVFRTKYNHDGSIARHKARLVAKGYHQSLYGFKQAPRTWFERFTSYLFTLGSVASKSNASFNIYVVLPPLEYIFSKVILLTDDPPQDSLPSSALI* Homology
BLAST of CSPI04G10300 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.9e-11 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10 Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 48/163 (29.45%), Postives = 61/163 (37.42%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 52.8 bits (125), Expect = 3.3e-06 Identity = 29/79 (36.71%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.3e-06 Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy TrEMBL
Match: A0A5A7UZE5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00300 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.9e-31 Identity = 81/137 (59.12%), Postives = 87/137 (63.50%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy TrEMBL
Match: A0A5D3DUH6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00270 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 8.0e-27 Identity = 72/127 (56.69%), Postives = 78/127 (61.42%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy TrEMBL
Match: A0A2N9EUK7 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6233 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 6.3e-24 Identity = 67/139 (48.20%), Postives = 83/139 (59.71%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy TrEMBL
Match: A0A5D3DQS0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00270 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.6e-22 Identity = 76/184 (41.30%), Postives = 84/184 (45.65%), Query Frame = 0
BLAST of CSPI04G10300 vs. ExPASy TrEMBL
Match: A0A2N9EM20 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7789 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.6e-22 Identity = 68/147 (46.26%), Postives = 82/147 (55.78%), Query Frame = 0
BLAST of CSPI04G10300 vs. NCBI nr
Match: KAA0061282.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09861.1 putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30 Identity = 81/137 (59.12%), Postives = 87/137 (63.50%), Query Frame = 0
BLAST of CSPI04G10300 vs. NCBI nr
Match: KAA0057165.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27148.1 putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26 Identity = 72/127 (56.69%), Postives = 78/127 (61.42%), Query Frame = 0
BLAST of CSPI04G10300 vs. NCBI nr
Match: XP_016902519.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo] >KAA0067172.1 putative mitochondrial protein [Cucumis melo var. makuwa] >TYK26021.1 putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 114.8 bits (286), Expect = 5.5e-22 Identity = 76/184 (41.30%), Postives = 84/184 (45.65%), Query Frame = 0
BLAST of CSPI04G10300 vs. NCBI nr
Match: XP_019155374.1 (PREDICTED: uncharacterized protein LOC109152241 [Ipomoea nil]) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CSPI04G10300 vs. NCBI nr
Match: BBG99972.1 (hypothetical protein Prudu_009845 [Prunus dulcis]) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20 Identity = 60/108 (55.56%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of CSPI04G10300 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) ) HSP 1 Score: 68.6 bits (166), Expect = 4.2e-12 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of CSPI04G10300 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 67.8 bits (164), Expect = 7.1e-12 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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