CSPI04G10280 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTTCAAGGTACAGGCCTTTGCCTTCTTGTGGTGGCGGCGATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG ATGAAAGTTCAAGGTACAGGCCTTTGCCTTCTTGTGGTGGCGGCGATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG ATGAAAGTTCAAGGTACAGGCCTTTGCCTTCTTGTGGTGGCGGCGATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG MKVQGTGLCLLVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC* Homology
BLAST of CSPI04G10280 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.2e-19 Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.3e-15 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-12 Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 4.0e-12 Identity = 35/91 (38.46%), Postives = 48/91 (52.75%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy TrEMBL
Match: A0A0A0KW80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141210 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.8e-45 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy TrEMBL
Match: A0A5D3BT00 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00780 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 7.9e-43 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy TrEMBL
Match: A0A6J1E135 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111024980 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.5e-21 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy TrEMBL
Match: A0A4Y1R5X5 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_009300 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.5e-20 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of CSPI04G10280 vs. ExPASy TrEMBL
Match: A0A251Q082 (AAI domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_3G147900 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.5e-20 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of CSPI04G10280 vs. NCBI nr
Match: KGN53813.1 (hypothetical protein Csa_015036 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 7.8e-45 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CSPI04G10280 vs. NCBI nr
Match: KAA0064158.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02871.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of CSPI04G10280 vs. NCBI nr
Match: KAG6581741.1 (hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581744.1 hypothetical protein SDJN03_21746, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25 Identity = 58/93 (62.37%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of CSPI04G10280 vs. NCBI nr
Match: KAF7130843.1 (hypothetical protein RHSIM_Rhsim10G0072400 [Rhododendron simsii]) HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20 Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of CSPI04G10280 vs. NCBI nr
Match: XP_022158506.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of CSPI04G10280 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 94.4 bits (233), Expect = 5.4e-20 Identity = 38/85 (44.71%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of CSPI04G10280 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-19 Identity = 39/93 (41.94%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of CSPI04G10280 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of CSPI04G10280 vs. TAIR 10
Match: AT5G38195.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 5.8e-14 Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of CSPI04G10280 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 6.4e-13 Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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