CSPI04G10220 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G10220
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transposon Ty3-G Gag-Pol polyprotein
Location	Chr4: 8251612 .. 8255533 (+)
RNA-Seq Expression	CSPI04G10220
Synteny	CSPI04G10220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGAGAACTTTATTGGGATAGGATGAAAAAAGATATTAAGAATTATGTGGAGCAATGCAACATATGTCAAAGAAACAAAACGGAATCAACCTTACCAGCAGGGTTACTTCAACCTATTCCTATACCAGAACTCATGCTTGAAGATTGGTCCATGGATTTTGTGGAAGGACTACCAACAGATGGAAATGTGAATGCAATAATGGTTGTGGTGGATAGGCTAAGCAAATGTGCCTACTTTGTGACATTGAGACACCCCTTCTCGGCGAAACAAGTTGCTGAAGTCTTTATTGATAAAGTGATAAGGAAACATGGGGTACCAAAAATCCATCATGACCGAGACAAAAAATTTCTAAGTAACTTCTGGAAGGAACTTTTTTCCCCTAAGGGCACCTCCTTGAAGAGAAGCACAGCTTTCCATCCCCAAACAGATGGACAAACTGAGAGAGTTAACCGTTGCCTTGAGACTTACCTAGCGTGTTACTACAATGAACAACCCACAAAATGGCACATGTTTATTCCGTAGGCTAAACTTTGGTATAACACCACCTTCCATGCTACCACAAAATCCACTCCTTTCCAACTTGTCTTTGGTAGACCTCCACCTCCACTGATTTCATATGGAGAAAGGAAATCACGGAATAATGAAGTTGAACAAATGCTCAAAGAAACGGATTTATCTCTGAATGCTCTAAAAGAAAATATGAACATGGCTCAAAATAGAATGAAGAAATTTGTTGATCTAAAAAGAAGAGAGGTGCAGTTTGAGGTGGGAGATGCTGTCTATCTGAAATTGAAACCCTATAGGCAACGCTCTCTTGCAATAAAGAGAAGTGAAAAGTTGGCACCGAAGTTCTATGGGCCGTATGAAATAATTGAAAAGATTGATGAAGTGGCATATCGTTTGAAGCTCCCTCTCGAAGCTGCCGTACATAATGTGTTTCACGTTTCTCAATTGAAAACGAAAGTTAGGGCAACAACAGCAAGCTCAACCAATAGCCCTAAACTGACCGAAGAGTTCGAATTGTAACTCAACCCTGAAACAGTGCTGGAATTTGTTGGAGTAAGGAGCTTGGTGCCAATGAGTGGCTGATCAAATGAAAGAATCTACCAGAAACTGAAGCTACTTGGGAATCAGTTTATCTAATGAAACAGCAGTTCCCCAACTTCCACCTTGAGGACAAGGTGAATCTTGAAGCCAGGGGTGTTGTAAGGCCTCCTATTATCCATCAGTATAAAAGAAAGGGCAGGAAAGTAAATACACAGGAGGGGACAGAGCTGGGAGAGAGAAATAAAGAAAAGAATGATGTCTTTTAGGGAGGAGTCGTCAGCCACATAAAGGGCTGGGCTATTTTCTCTGTCTTTCTTTCTGAACTGGTGTGTATTTCTTACTGTTTCTTTACTTTGCTTTGGATCTCTTGTTGAACTTTCTGTTTATTGGAATATAGGTCTATCATAGAGTGCTGCCTCTGTTTCTATCATTTTGTTGGGATTGTTATTGTCTTTTGAGGAAAGAACCTAACAGAAGGAAATTCTTCAAAGAAAGTTGCTAACCCTTACTCTCGTCCTTCTTTAGGCAAATGCTTTCGCTGTGGCCAACAAGGGCACCTCTCCAACAAACGCCCTCAAAGAAAAATGCTAGCCATAAGTGATGACAACGAAGATGTTCAAGAAGAGCTGTTGGACAAGGAAGAAGATGCTGTTGTTTTATACACGGATGAAGATGAAAATTTATCTTGTGTTTTACAAAAGATTTTACTAAATCCCAAAACAAAGTATCATCCCCAAAGACATATCCTTTTCAGAAGTAGTTGTACTGTCAATCGGAAAATTTGTCAAGTGATCACCAATAGAGGGAGTAGTGAAAACATAGTCACCAAAAAGCTTGTGGCCCAAGCTTAACCTCAAACATCCCCATATCGTAGTCCATAATAGGTTAGTTGGATACAAAAGGGAAACGAACCTAATCACTTAAATTTGTACCATTCCCCTCTCTATAGGTAATACACATATAAGGACCAAGTGATGTGCGATGTTTTAGAAATGGATGTGTGCCATATCCTTCTAGGCCGCCCATGGCAATATGATAATCAAACCACCCATAACGGACAGAAGAGAATGCCTGTGAATTTTATCGGATGGAAAAAAGGATTGTGTTAGTTCTGATTGGCAACAATGAGATCCCAAAAACTACAACTACTTCCAAGAATAAGAATCTCTTTACTGTATGCCCTGGTAGTGAACTAACCTTCTTAAAAAAGGCTTTCGTGGTAAAAAAACTCAACCCTCAAAGTGAAAAACACAACACTTAGTCCATTAATAACCAATCTCTTTGAGAGAATTCCCACTTCTAACACAAAACCCATCCTCTTTACCTCCTTTACCTATTATTCAGCACCAAATTGATCTCAGATCAGGGAGTTCTTTACCCAATCTTCCACACTACCGAATGAGCCCATTCCTAGGCCTAATGACCAGTGTTTTAAAAGCCCACTAAGGCGCACGCCTAGGCTCAAGGACCCACTTGGAGCTTATTTGTGAAGAAGCGAAGCGATTTCTGAAAAGCCCGGCTTAGGCGTGTGCCTCCCTTCAGGGGCGTCTAGGCTCAAGTCGCATTAGGCATGGGCTTTTTTTATAACTAATGGGCTGGGCTTTAATTATAAAAAAAATATTATTACGTAGGTTTTTTAAACCTATTACGTGAAATTGAAGAAACAACCCTTCACCCTTCTCCTCCCACAAATTTTCTTTAACGAACGACTCTTCATCTATTTCCGTTCCTTTTCGCTTCTGCTTCAAAGAAACTCTATCGCCGGCGCTGACCTTCAACAAATCTCTTCGGCAATGTAAGGTCCACAGGCCACCCTTCTTCTTCACACAAAACGTCAAGATTTCTTCTTCTTCAACAAATCAATTTGGTGCTGCCATTACTCTGTTTTTTGGTGCAAAAACAGAGGAAAAGAGAAGATAAGGACGCTTCCCAAAATCACCGGCCACCCTTCTTCTTCTTCACACAAAACGGAAAGGTTTCTTCTTCTTCAACAAATACCTTGACATTTTTTTTTTCTTTTTAACACAAATAGCATAAATACCTTTTGTTTTTTTTTCTTTTTAACACAGCTGCTGTTTTTTCTTTTAAAAAAAAACTAAAACAGCAGATTTAGATAGCTTCTGTCTTTTTTTTCTTTTTAACACAGATGCTGTTTTTCTCTAAAAAAAACTACAACAGCAGATTTAAATAGCTGCTGTTTTTTCTTATAAAATATTGATTTTTTTTTTTTTTGTTAATTTTAAAAAATAATTTGTGAATAATTATTTTGATAACTTAGATCATAGATGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCATAATGACCAAGATATAAATATGTTTTTCTGTGGATTTCGTTCAAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGATTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGAGATTAAAGAACAAAAAAATCTGATTCTGGACATTGATGTAGAAGATTACGGTATCGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAATAGAGCAACACCAAGTGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCCTTTTTTACTCCGAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCGTTGAATGTGGCATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGATCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGATCCTGGATTGA

mRNA sequence

ATGAGTGGAGAACTTTATTGGGATAGGATGAAAAAAGATATTAAGAATTATGTGGAGCAATGCAACATATGTCAAAGAAACAAAACGGAATCAACCTTACCAGCAGGGTTACTTCAACCTATTCCTATACCAGAACTCATGCTTGAAGATTGGTCCATGGATTTTGTGGAAGGACTACCAACAGATGGAAATGTGAATGCAATAATGGTTGTGGTGGATAGGCTAAGCAAATGTGCCTACTTTGTGACATTGAGACACCCCTTCTCGGCGAAACAAGTTGCTGAAGTCTTTATTGATAAAGTGATAAGGAAACATGGGGTACCAAAAATCCATCATGACCGAGACAAAAAATTTCTAAGTAACTTCTGGAAGGAACTTTTTTCCCCTAAGGGCACCTCCTTGAAGAGAAGCACAGCTTTCCATCCCCAAACAGATGGACAAACTGAGAGAGTTAACCGTTGCCTTGAGACTTACCTAGCGTGTTACTACAATGAACAACCCACAAAATGGCACATGTTTATTCCACCTCCACCTCCACTGATTTCATATGGAGAAAGGAAATCACGGAATAATGAAGTTGAACAAATGCTCAAAGAAACGGATTTATCTCTGAATGCTCTAAAAGAAAATATGAACATGGCTCAAAATAGAATGAAGAAATTTGTTGATCTAAAAAGAAGAGAGGTGCAGTTTGAGGTGGGAGATGCTGTCTATCTGAAATTGAAACCCTATAGGCAACGCTCTCTTGCAATAAAGAGAAGTGAAAAGTTGGCACCGAAGTTCTATGGGCCGTATGAAATAATTGAAAAGATTGATGAAGTGGCATATCGTTTGAAGCTCCCTCTCGAAGCTGCCAATCTACCAGAAACTGAAGCTACTTGGGAATCAGTTTATCTAATGAAACAGCAGTTCCCCAACTTCCACCTTGAGGACAAGGTGAATCTTGAAGCCAGGGGTGTTGGAGGAGTCGTCAGCCACATAAAGGGCTGGGCTATTTTCTCTGTCTTTCTTTCTGAACTGAACCTAACAGAAGGAAATTCTTCAAAGAAAGTTGCTAACCCTTACTCTCGTCCTTCTTTAGGCAAATGCTTTCGCTGTGGCCAACAAGGGCACCTCTCCAACAAACGCCCTCAAAGAAAAATGCTAGCCATAAGTGATGACAACGAAGATGTTCAAGAAGAGCTGTTGGACAAGGAAGAAGATGCTGTTGTTTTATACACGGATGAAGATGAAAATTTATCTTGTGTTTTACAAAAGATTTTACTAAATCCCAAAACAAAGTATCATCCCCAAAGACATATCCTTTTCAGAAGTAGTTGTACTGTCAATCGGAAAATTTGTCAAGTGATCACCAATAGAGGGAGTAGTGAAAACATAGTCACCAAAAAGCTTGCCGCCCATGGCAATATGATAATCAAACCACCCATAACGGACAGAAGAGAATGCCTAAGCGAAGCGATTTCTGAAAAGCCCGGCTTAGGCGTGTGCCTCCCTTCAGGGGCGTCTAGGCTCAAAAACAACCCTTCACCCTTCTCCTCCCACAAATTTTCTTTAACGAACGACTCTTCATCTATTTCCGTTCCTTTTCGCTTCTGCTTCAAAGAAACTCTATCGCCGGCGCTGACCTTCAACAAATCTCTTCGGCAATGTAAGAGGAAAAGAGAAGATAAGGACGCTTCCCAAAATCACCGGCCACCCTTCTTCTTCTTCACACAAAACGGAAAGATCATAGATGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCATAATGACCAAGATATAAATATGTTTTTCTGTGGATTTCGTTCAAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGATTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGAGATTAAAGAACAAAAAAATCTGATTCTGGACATTGATGTAGAAGATTACGGTATCGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAATAGAGCAACACCAAGTGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCCTTTTTTACTCCGAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCGTTGAATGTGGCATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGATCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGATCCTGGATTGA

Coding sequence (CDS)

ATGAGTGGAGAACTTTATTGGGATAGGATGAAAAAAGATATTAAGAATTATGTGGAGCAATGCAACATATGTCAAAGAAACAAAACGGAATCAACCTTACCAGCAGGGTTACTTCAACCTATTCCTATACCAGAACTCATGCTTGAAGATTGGTCCATGGATTTTGTGGAAGGACTACCAACAGATGGAAATGTGAATGCAATAATGGTTGTGGTGGATAGGCTAAGCAAATGTGCCTACTTTGTGACATTGAGACACCCCTTCTCGGCGAAACAAGTTGCTGAAGTCTTTATTGATAAAGTGATAAGGAAACATGGGGTACCAAAAATCCATCATGACCGAGACAAAAAATTTCTAAGTAACTTCTGGAAGGAACTTTTTTCCCCTAAGGGCACCTCCTTGAAGAGAAGCACAGCTTTCCATCCCCAAACAGATGGACAAACTGAGAGAGTTAACCGTTGCCTTGAGACTTACCTAGCGTGTTACTACAATGAACAACCCACAAAATGGCACATGTTTATTCCACCTCCACCTCCACTGATTTCATATGGAGAAAGGAAATCACGGAATAATGAAGTTGAACAAATGCTCAAAGAAACGGATTTATCTCTGAATGCTCTAAAAGAAAATATGAACATGGCTCAAAATAGAATGAAGAAATTTGTTGATCTAAAAAGAAGAGAGGTGCAGTTTGAGGTGGGAGATGCTGTCTATCTGAAATTGAAACCCTATAGGCAACGCTCTCTTGCAATAAAGAGAAGTGAAAAGTTGGCACCGAAGTTCTATGGGCCGTATGAAATAATTGAAAAGATTGATGAAGTGGCATATCGTTTGAAGCTCCCTCTCGAAGCTGCCAATCTACCAGAAACTGAAGCTACTTGGGAATCAGTTTATCTAATGAAACAGCAGTTCCCCAACTTCCACCTTGAGGACAAGGTGAATCTTGAAGCCAGGGGTGTTGGAGGAGTCGTCAGCCACATAAAGGGCTGGGCTATTTTCTCTGTCTTTCTTTCTGAACTGAACCTAACAGAAGGAAATTCTTCAAAGAAAGTTGCTAACCCTTACTCTCGTCCTTCTTTAGGCAAATGCTTTCGCTGTGGCCAACAAGGGCACCTCTCCAACAAACGCCCTCAAAGAAAAATGCTAGCCATAAGTGATGACAACGAAGATGTTCAAGAAGAGCTGTTGGACAAGGAAGAAGATGCTGTTGTTTTATACACGGATGAAGATGAAAATTTATCTTGTGTTTTACAAAAGATTTTACTAAATCCCAAAACAAAGTATCATCCCCAAAGACATATCCTTTTCAGAAGTAGTTGTACTGTCAATCGGAAAATTTGTCAAGTGATCACCAATAGAGGGAGTAGTGAAAACATAGTCACCAAAAAGCTTGCCGCCCATGGCAATATGATAATCAAACCACCCATAACGGACAGAAGAGAATGCCTAAGCGAAGCGATTTCTGAAAAGCCCGGCTTAGGCGTGTGCCTCCCTTCAGGGGCGTCTAGGCTCAAAAACAACCCTTCACCCTTCTCCTCCCACAAATTTTCTTTAACGAACGACTCTTCATCTATTTCCGTTCCTTTTCGCTTCTGCTTCAAAGAAACTCTATCGCCGGCGCTGACCTTCAACAAATCTCTTCGGCAATGTAAGAGGAAAAGAGAAGATAAGGACGCTTCCCAAAATCACCGGCCACCCTTCTTCTTCTTCACACAAAACGGAAAGATCATAGATGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCATAATGACCAAGATATAAATATGTTTTTCTGTGGATTTCGTTCAAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGATTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGAGATTAAAGAACAAAAAAATCTGATTCTGGACATTGATGTAGAAGATTACGGTATCGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAATAGAGCAACACCAAGTGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCCTTTTTTACTCCGAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCGTTGAATGTGGCATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGATCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGATCCTGGATTGA

Protein sequence

MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPKIHHDRDKKFLSNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIPPPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLKLPLEAANLPETEATWESVYLMKQQFPNFHLEDKVNLEARGVGGVVSHIKGWAIFSVFLSELNLTEGNSSKKVANPYSRPSLGKCFRCGQQGHLSNKRPQRKMLAISDDNEDVQEELLDKEEDAVVLYTDEDENLSCVLQKILLNPKTKYHPQRHILFRSSCTVNRKICQVITNRGSSENIVTKKLAAHGNMIIKPPITDRRECLSEAISEKPGLGVCLPSGASRLKNNPSPFSSHKFSLTNDSSSISVPFRFCFKETLSPALTFNKSLRQCKRKREDKDASQNHRPPFFFFTQNGKIIDADESSRKDPAWKYGQLHNDQDINMFFCGFRSKVTKGGVYRMKQHLVGDYRNVTACTKCPDHVKEEIKEYMSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYDAGVPLNACTYDSFAPMIESIGILD*

Homology

[Close]

BLAST of CSPI04G10220 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.4e-39
Identity = 105/304 (34.54%), Postives = 150/304 (49.34%), Query Frame = 0


Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  ------------HMFIPPPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRM 246
                        H + P   PL    E  S +++ ++  +ET      +KE++N    +M
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKM 1182

Query: 247  KKFVDLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYR 282
            KK+ D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y 
Sbjct: 1183 KKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYE 1238

[Close]

BLAST of CSPI04G10220 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.4e-39
Identity = 105/304 (34.54%), Postives = 150/304 (49.34%), Query Frame = 0


Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  ------------HMFIPPPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRM 246
                        H + P   PL    E  S +++ ++  +ET      +KE++N    +M
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKM 1182

Query: 247  KKFVDLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYR 282
            KK+ D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y 
Sbjct: 1183 KKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYE 1238

[Close]

BLAST of CSPI04G10220 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.4e-39
Identity = 105/304 (34.54%), Postives = 150/304 (49.34%), Query Frame = 0


Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  ------------HMFIPPPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRM 246
                        H + P   PL    E  S +++ ++  +ET      +KE++N    +M
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKM 1182

Query: 247  KKFVDLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYR 282
            KK+ D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y 
Sbjct: 1183 KKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYE 1238

[Close]

BLAST of CSPI04G10220 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.4e-39
Identity = 105/304 (34.54%), Postives = 150/304 (49.34%), Query Frame = 0


Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  ------------HMFIPPPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRM 246
                        H + P   PL    E  S +++ ++  +ET      +KE++N    +M
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKM 1182

Query: 247  KKFVDLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYR 282
            KK+ D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y 
Sbjct: 1183 KKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYE 1238

[Close]

BLAST of CSPI04G10220 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.4e-39
Identity = 105/304 (34.54%), Postives = 150/304 (49.34%), Query Frame = 0


Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  ------------HMFIPPPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRM 246
                        H + P   PL    E  S +++ ++  +ET      +KE++N    +M
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKM 1182

Query: 247  KKFVDLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYR 282
            KK+ D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y 
Sbjct: 1183 KKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYE 1238

[Close]

BLAST of CSPI04G10220 vs. ExPASy TrEMBL
Match: A0A5D3CT96 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001230 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.0e-124
Identity = 236/405 (58.27%), Postives = 277/405 (68.40%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY IIE I EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. ExPASy TrEMBL
Match: A0A5D3BBH7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00100 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.3e-124
Identity = 235/405 (58.02%), Postives = 277/405 (68.40%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY I E I EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. ExPASy TrEMBL
Match: A0A5A7TYN3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00710 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 3.0e-124
Identity = 235/405 (58.02%), Postives = 277/405 (68.40%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KVGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY I E I+EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIEEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQTQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. ExPASy TrEMBL
Match: A0A5D3E325 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00690 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 3.9e-124
Identity = 235/405 (58.02%), Postives = 276/405 (68.15%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY I E I EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. ExPASy TrEMBL
Match: A0A5D3DWA9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001670 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 3.9e-124
Identity = 235/405 (58.02%), Postives = 276/405 (68.15%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY I E I EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. NCBI nr
Match: TYK15071.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 457.6 bits (1176), Expect = 2.1e-124
Identity = 236/405 (58.27%), Postives = 277/405 (68.40%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY IIE I EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. NCBI nr
Match: TYJ96663.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 457.2 bits (1175), Expect = 2.8e-124
Identity = 235/405 (58.02%), Postives = 277/405 (68.40%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY I E I EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. NCBI nr
Match: KAA0046359.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 456.1 bits (1172), Expect = 6.2e-124
Identity = 235/405 (58.02%), Postives = 277/405 (68.40%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KVGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY I E I+EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIEEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQTQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. NCBI nr
Match: KGN62557.2 (hypothetical protein Csa_018739 [Cucumis sativus])

HSP 1 Score: 456.1 bits (1172), Expect = 6.2e-124
Identity = 234/405 (57.78%), Postives = 274/405 (67.65%), Query Frame = 0


Query: 1   MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
           M GELYW  MK D+K YV++C +CQRNK E+T PAG+LQPIPIPE +LEDWSMDF+EGLP
Sbjct: 567 MCGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILEDWSMDFIEGLP 626

Query: 61  TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
             G +N IMV+VDRLSK +YF+T+RHPF+A+QVAEVFID+V+ +HG+PK I  DRDK F+
Sbjct: 627 KAGGMNVIMVIVDRLSKYSYFITMRHPFNARQVAEVFIDRVVSRHGIPKSIISDRDKIFI 686

Query: 121 SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
           SNFWKE+F+  GT LKRSTAFHPQTDGQTERVNRC+ETYL C+ NEQPTKW+ FIP    
Sbjct: 687 SNFWKEIFASMGTLLKRSTAFHPQTDGQTERVNRCVETYLRCFCNEQPTKWNKFIPWAEL 746

Query: 181 ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPL+SYG  K+ +NEVE MLKE DL+L ALKEN+N+A
Sbjct: 747 WYNTTFHASSRSNPFQIVYGRSPPPLLSYGNHKTPHNEVELMLKERDLALIALKENLNVA 806

Query: 241 QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
           QNRMKK  D KRRE++F+VGD VYLKL+PYRQ SLA KRSEKLAPKFYGPY IIE+I EV
Sbjct: 807 QNRMKKMADSKRRELKFKVGDEVYLKLRPYRQHSLARKRSEKLAPKFYGPYRIIEEIGEV 866

Query: 301 AYRLKLPLEAA------------------------------------------------- 321
           AYRL+LP EA+                                                 
Sbjct: 867 AYRLQLPPEASIHDVFHISQLKLKLGKTHVVQIQQPVLTEEFELQLQPETVLGIRWNKDL 926

[Close]

BLAST of CSPI04G10220 vs. NCBI nr
Match: TYK21035.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 455.7 bits (1171), Expect = 8.1e-124
Identity = 235/405 (58.02%), Postives = 276/405 (68.15%), Query Frame = 0


Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            MSGEL+W  MK+DIK YVEQC ICQRNK+E+T PAG+LQP+PIP+ +LEDW+MDF+EGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
              G +N IMVVVDRLSK AYFVT++HPFSAKQVA  FIDK++R+HG+PK I  DRDK F+
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            SNFWKELF    T LKRSTAFHPQTDGQTERVN+CLETYL C+ NEQP KWH FIP    
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                 PPPPLISYG++K+ N+EVE +LKE DL+++ALKEN+ +A
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 300
            QNRMKKF D KRRE++F+VGD VYLKL+PYRQRSLA KR+EKLAPK+YGPY I E I EV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLKLPLEAA------------------------------------------------- 321
            AYRL LP EA+                                                 
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

[Close]

BLAST of CSPI04G10220 vs. TAIR 10
Match: AT1G36095.1 (DNA binding )

HSP 1 Score: 73.6 bits (179), Expect = 8.0e-13
Identity = 57/144 (39.58%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 579 ADESSRK--DPAWKYGQLHNDQDINMFFCGFRSKVTKGGVYRMKQHLVGDYRNVTACTKC 638
           +DE S K  DP  KY Q         + C +  KVT GGV   KQH++G +RNVT C+  
Sbjct: 2   SDELSHKNLDPVKKYAQ-PVPLKHGSWRCNYCHKVTNGGVKGAKQHILGGFRNVTQCSLV 61

Query: 639 PDHVKEEIKEYMSKKKEIKEQKNLILD--IDVEDYGIEDEDEGSVSVNNRATPSGPSLKK 698
           P  ++EEIK+ M KK EIK    ++       +DYG E+E+   V  N R     P +KK
Sbjct: 62  PPIMREEIKDSMLKKTEIKATTQMMPPPATSYDDYG-EEEEAAEVLGNERRQ---PPVKK 121

Query: 699 PRQKGPMDAFFTPNPETVVQNRKD 719
             QKG MD F  P    V++  KD
Sbjct: 122 --QKGLMDMFVCPTLPNVLKVLKD 138

[Close]

BLAST of CSPI04G10220 vs. TAIR 10
Match: AT3G17450.1 (hAT dimerisation domain-containing protein )

HSP 1 Score: 50.4 bits (119), Expect = 7.3e-06
Identity = 25/75 (33.33%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 586 DPAWKYGQLHNDQDINMFFCGFRSKVTKGGVYRMKQHLVGDYRNVTACTKCPDHVKEEIK 645
           DP W++G +  DQ      C +  K+  GG+YR+KQHL      VT C K P+ V   +K
Sbjct: 11  DPGWEHG-VAQDQRKKKVKCNYCGKIVSGGIYRLKQHLARVSGEVTYCDKSPEEVCMRMK 70

Query: 646 EYMSKK-KEIKEQKN 660
           E + +  K++++ ++
Sbjct: 71  ENLVRSTKKLRQSED 84

The following BLAST results are available for this feature:

BLAST of CSPI04G10220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	6.4e-39	34.54	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	6.4e-39	34.54	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	6.4e-39	34.54	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	6.4e-39	34.54	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	6.4e-39	34.54	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI04G10220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CT96	1.0e-124	58.27	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BBH7	1.3e-124	58.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TYN3	3.0e-124	58.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3E325	3.9e-124	58.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DWA9	3.9e-124	58.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of CSPI04G10220 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15071.1	2.1e-124	58.27	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ96663.1	2.8e-124	58.02	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046359.1	6.2e-124	58.02	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KGN62557.2	6.2e-124	57.78	hypothetical protein Csa_018739 [Cucumis sativus]	[more]
TYK21035.1	8.1e-124	58.02	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gyp...	[more]

BLAST of CSPI04G10220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G36095.1	8.0e-13	39.58	DNA binding	[more]
AT3G17450.1	7.3e-06	33.33	hAT dimerisation domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 640..660
None	No IPR available	COILS	Coil	Coil	coord: 190..224
None	No IPR available	GENE3D	1.10.340.70		coord: 1..28 e-value: 3.1E-5 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 675..700
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 5..175
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 38..212 e-value: 2.4E-29 score: 104.0
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 5..29 e-value: 7.2E-8 score: 32.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 38..225 score: 16.078697
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 40..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G10220.1	CSPI04G10220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding