CSPI04G09850 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G09850
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L9-like
LocationChr4: 7822789 .. 7824676 (-)
RNA-Seq ExpressionCSPI04G09850
SyntenyCSPI04G09850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTATTCGGCATCTGTTTTCTCTGTATATAAGTCGTTTCTCAGCTTTCCTCCGCCTCCTGCCGCAGCCTTCCTGTGGTTTTCTGCCGCCGCTTGCTTCCCTGAGTCTCTTTTCAAACTTGAGAGTAAAAAATGAAGACCATTCTTTCATCCGAGTCTATGGATATCCCAGATGGAGTCAAAATCAAGGTGCATGCCAAGATCATCGAGGTCGAAGGCCCTCGTGGTAAGCTTGTTCGCAACTTTAAGCACCTTAATCTCGACTTTCAACTTATAACTGACGACGCTACCGGCAAGAAGAAGCTCCGCATCGAGGCCTGGTTCGGGTCCAGGAAGACATCCGCTGCTATTCGAACCGCTCTCAGCCATGTTGAGAACCTTATTACAGGTGTCACTAAAGGCTATCGTTACAAGATGCGTTTCGTCTATGCTCACTTTCCCATCAATGCTAGCATTACAAATGGCAGCAAGGCTATTGAGATTCGTAACTTTCTTGGTGAAAAGAAGGTGCCCTTTTTTTTTTCTGCTTATAATGTTCATCATTCATTCCATTTTTTTATTCCTATTATTTACATTACTTCGTATACTCGTGTGGGCCTGTGCTGTTACTTGTTTCTAAACTCACGCTGTTGTTTGATACCTGCATATTTTATTTGTTCTAGTCTTCTTCCTGTTACGACTTTTACATGATAAAACGAACCTTATGGTGCCTTAGTTTTTTTTTTTTTTTATCAAGTTTTGATATATTTCTACCTGTATTGTTTTTAATGCCCGTGTTTGATGTTTGAATTACTAGTTTTACAAATAGGTAATCCCTTGTTACATGATTTCTTATTGGAGATCTATGGAGCAATACATATAAGTTGCAGTTTATTCTGGGCAACACCCGTTCGAATCTCATTACCAGTTCTGTTAGAAATTCAAATTTCGGTTTAGTACTAAAATCATCATATCAAGAGAATCCTTGGCATTGATTAATGAGACCATCTTTCAAAGATGACGAGTTAACTTGGATGCTCATGAATATAGTAAAAAAAGAAAGTGATATGTCGTTCATACTATAACTCTCCGTGGCAGTGTTTTGTATGTGTTAGACAATCTGGACGTTGCTTCAATTCTCTGATTCTCGCTTACTTTCTTCTTATTATTGAAAAGATTATTTCTGGGATAAAAACAAGTTGGAATTACTATTGTTTTTAATTCATTTTTCTAGCGGCATGCATAGATTTTGTCCTTGGCTCAGATTTCATTGCGTAGTTTGCACTAGATAGGATATTGCCCATGCGATGTTGTGAATTTGTTATGAACCATGCTCATAATTGTTGCATCAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCCGAAAAAGTGAAGGATGAGTTAGTTTTGGATGGAAATGATATTGAACTTGTGTCGCGGTCTTGTGCCCTTATAAACCAGGTTTGTCTTTTTTCCACTTGCATCCAAACTTCGTTGCACATGGAGGGAAAGAGAAATCATTCAGTGACTCATTATTCTTCTTTGCCTTATTTTGCAGAAATGTCATGTCAAGAACAAGGATATACGGAAGTTCCTTGATGGTATCTATGTCAGCGAGAAGGGAACCATAATTGGAGAAGATGAGTGATCCATACAATTGTAGGTTATATCTGCACTTAGTTTCAAGAGTTTGTTCTCTTTTGGAATTGTTTTTTTCATGACTTATATTGTGATGTTTCTTTTTGTGTCCACCCTTTGAAAACACATTACAGTTTTGTTTTATGACAGTTTTTTAGTTAAGGCACAAAAACAATGCTCGGTAACCCCTTTTTCACTTGATTTCTGCTTTCAAATCTAATAATAATGATCTAGGCCATCTTAGGTTCTGCATTAAC

mRNA sequence

TTTTTATTCGGCATCTGTTTTCTCTGTATATAAGTCGTTTCTCAGCTTTCCTCCGCCTCCTGCCGCAGCCTTCCTGTGGTTTTCTGCCGCCGCTTGCTTCCCTGAGTCTCTTTTCAAACTTGAGAGTAAAAAATGAAGACCATTCTTTCATCCGAGTCTATGGATATCCCAGATGGAGTCAAAATCAAGGTGCATGCCAAGATCATCGAGGTCGAAGGCCCTCGTGGTAAGCTTGTTCGCAACTTTAAGCACCTTAATCTCGACTTTCAACTTATAACTGACGACGCTACCGGCAAGAAGAAGCTCCGCATCGAGGCCTGGTTCGGGTCCAGGAAGACATCCGCTGCTATTCGAACCGCTCTCAGCCATGTTGAGAACCTTATTACAGGTGTCACTAAAGGCTATCGTTACAAGATGCGTTTCGTCTATGCTCACTTTCCCATCAATGCTAGCATTACAAATGGCAGCAAGGCTATTGAGATTCGTAACTTTCTTGGTGAAAAGAAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCCGAAAAAGTGAAGGATGAGTTAGTTTTGGATGGAAATGATATTGAACTTGTGTCGCGGTCTTGTGCCCTTATAAACCAGAAATGTCATGTCAAGAACAAGGATATACGGAAGTTCCTTGATGGTATCTATGTCAGCGAGAAGGGAACCATAATTGGAGAAGATGAGTGATCCATACAATTGTAGGTTATATCTGCACTTAGTTTCAAGAGTTTGTTCTCTTTTGGAATTGTTTTTTTCATGACTTATATTGTGATGTTTCTTTTTGTGTCCACCCTTTGAAAACACATTACAGTTTTGTTTTATGACAGTTTTTTAGTTAAGGCACAAAAACAATGCTCGGTAACCCCTTTTTCACTTGATTTCTGCTTTCAAATCTAATAATAATGATCTAGGCCATCTTAGGTTCTGCATTAAC

Coding sequence (CDS)

ATGAAGACCATTCTTTCATCCGAGTCTATGGATATCCCAGATGGAGTCAAAATCAAGGTGCATGCCAAGATCATCGAGGTCGAAGGCCCTCGTGGTAAGCTTGTTCGCAACTTTAAGCACCTTAATCTCGACTTTCAACTTATAACTGACGACGCTACCGGCAAGAAGAAGCTCCGCATCGAGGCCTGGTTCGGGTCCAGGAAGACATCCGCTGCTATTCGAACCGCTCTCAGCCATGTTGAGAACCTTATTACAGGTGTCACTAAAGGCTATCGTTACAAGATGCGTTTCGTCTATGCTCACTTTCCCATCAATGCTAGCATTACAAATGGCAGCAAGGCTATTGAGATTCGTAACTTTCTTGGTGAAAAGAAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCCGAAAAAGTGAAGGATGAGTTAGTTTTGGATGGAAATGATATTGAACTTGTGTCGCGGTCTTGTGCCCTTATAAACCAGAAATGTCATGTCAAGAACAAGGATATACGGAAGTTCCTTGATGGTATCTATGTCAGCGAGAAGGGAACCATAATTGGAGAAGATGAGTGA

Protein sequence

MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRIEAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNFLGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIIGEDE*
Homology
[Close]
BLAST of CSPI04G09850 vs. ExPASy Swiss-Prot
Match: P30707 (60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.4e-91
Identity = 168/194 (86.60%), Postives = 184/194 (94.85%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSE+M+IPDGV IKV+AK+IEVEGPRGKLVR+FKHLNLDF LITD+  GKKKL+I
Sbjct: 1   MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDE-NGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           +AWFGSRKTSAAIRTALSHVENLITGVTKG+RYKMRFVYA FPINASITN +K+IEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVD+LDGVSI RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIIGED 195
           GIYVSEKG ++ E+
Sbjct: 181 GIYVSEKGAVVVEE 193

[Close]
BLAST of CSPI04G09850 vs. ExPASy Swiss-Prot
Match: P49209 (60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3)

HSP 1 Score: 331.3 bits (848), Expect = 7.6e-90
Identity = 162/194 (83.51%), Postives = 180/194 (92.78%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSE+MDIPD V IKVHAK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    K+IEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIIGED 195
           GIYVSEK  I+ E+
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]
BLAST of CSPI04G09850 vs. ExPASy Swiss-Prot
Match: Q9SZX9 (60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.1e-87
Identity = 157/194 (80.93%), Postives = 178/194 (91.75%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSE+MDIPDGV IKV+AK+IEVEGPRGKL R+FKHLNLDFQLI D  TGK++L+I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           ++WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI   +K+IEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV I RSEKVKDE++L+GNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIIGED 195
           GIYVSEKG I  E+
Sbjct: 181 GIYVSEKGKIAVEE 194

[Close]
BLAST of CSPI04G09850 vs. ExPASy Swiss-Prot
Match: P49210 (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3)

HSP 1 Score: 313.2 bits (801), Expect = 2.2e-84
Identity = 154/190 (81.05%), Postives = 175/190 (92.11%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTIL+SE+M+IP+GV ++V AK++ VEGPRGKL RNFKHLNLDFQL+     G +KL++
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL----EGGRKLQV 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           +AWFG+R+T AAIRTA+SHV+NLITGVTKGYRYKMRFVYAHFPINASITN + AIEIRNF
Sbjct: 61  DAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDML+GV+I RSEKVKDELVLDGNDIELVSRS ALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTI 191
           GIYVS+KGTI
Sbjct: 181 GIYVSDKGTI 186

[Close]
BLAST of CSPI04G09850 vs. ExPASy Swiss-Prot
Match: P51410 (60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-57
Identity = 111/195 (56.92%), Postives = 144/195 (73.85%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILS++++DIP+ V+I +  + + V+GPRG L R+F H+N++  L+      KK+LR+
Sbjct: 1   MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLL---GKKKKRLRV 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           + W+G+RK  A +RT  SHV+N+I GVT G+RYKMR VYAHFPIN  I      +EIRNF
Sbjct: 61  DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEK +R+V M  GV+ + S+  KDEL+L+GNDIELVS S ALI Q   VKNKDIRKFLD
Sbjct: 121 LGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGT+   DE
Sbjct: 181 GIYVSEKGTVQQADE 192

[Close]
BLAST of CSPI04G09850 vs. ExPASy TrEMBL
Match: A0A0A0KW25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124900 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.3e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTIIGEDE
Sbjct: 181 GIYVSEKGTIIGEDE 195

[Close]
BLAST of CSPI04G09850 vs. ExPASy TrEMBL
Match: A0A6J1G231 (60S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111449954 PE=3 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102
Identity = 191/195 (97.95%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTI+GE+E
Sbjct: 181 GIYVSEKGTIVGEEE 195

[Close]
BLAST of CSPI04G09850 vs. ExPASy TrEMBL
Match: A0A1S3CHZ9 (60S ribosomal protein L9-like OS=Cucumis melo OX=3656 GN=LOC103501171 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTI+G DE
Sbjct: 181 GIYVSEKGTIVGADE 195

[Close]
BLAST of CSPI04G09850 vs. ExPASy TrEMBL
Match: A0A5D3C0B3 (60S ribosomal protein L9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00160 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTI+G DE
Sbjct: 181 GIYVSEKGTIVGADE 195

[Close]
BLAST of CSPI04G09850 vs. ExPASy TrEMBL
Match: A0A6J1HZM6 (60S ribosomal protein L9-like OS=Cucurbita maxima OX=3661 GN=LOC111467681 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.3e-102
Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTI+GE+E
Sbjct: 181 GIYVSEKGTIVGEEE 195

[Close]
BLAST of CSPI04G09850 vs. NCBI nr
Match: XP_004137145.1 (60S ribosomal protein L9 [Cucumis sativus] >KGN53768.1 hypothetical protein Csa_014503 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 8.9e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTIIGEDE
Sbjct: 181 GIYVSEKGTIIGEDE 195

[Close]
BLAST of CSPI04G09850 vs. NCBI nr
Match: XP_022945825.1 (60S ribosomal protein L9-like [Cucurbita moschata] >XP_023542544.1 60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo] >KAG6574272.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013341.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382.5 bits (981), Expect = 2.2e-102
Identity = 191/195 (97.95%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTI+GE+E
Sbjct: 181 GIYVSEKGTIVGEEE 195

[Close]
BLAST of CSPI04G09850 vs. NCBI nr
Match: XP_008462900.1 (PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >XP_016902942.1 PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >KAA0056651.1 60S ribosomal protein L9-like [Cucumis melo var. makuwa] >TYK04612.1 60S ribosomal protein L9-like [Cucumis melo var. makuwa])

HSP 1 Score: 381.7 bits (979), Expect = 3.8e-102
Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTI+G DE
Sbjct: 181 GIYVSEKGTIVGADE 195

[Close]
BLAST of CSPI04G09850 vs. NCBI nr
Match: XP_022968434.1 (60S ribosomal protein L9-like [Cucurbita maxima])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTI+GE+E
Sbjct: 181 GIYVSEKGTIVGEEE 195

[Close]
BLAST of CSPI04G09850 vs. NCBI nr
Match: XP_038897570.1 (60S ribosomal protein L9-like [Benincasa hispida])

HSP 1 Score: 379.0 bits (972), Expect = 2.4e-101
Identity = 190/195 (97.44%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNNSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIIGEDE 196
           GIYVSEKGTI+G DE
Sbjct: 181 GIYVSEKGTIVGGDE 195

[Close]
BLAST of CSPI04G09850 vs. TAIR 10
Match: AT1G33120.1 (Ribosomal protein L6 family )

HSP 1 Score: 331.3 bits (848), Expect = 5.4e-91
Identity = 162/194 (83.51%), Postives = 180/194 (92.78%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSE+MDIPD V IKVHAK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    K+IEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIIGED 195
           GIYVSEK  I+ E+
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]
BLAST of CSPI04G09850 vs. TAIR 10
Match: AT1G33140.1 (Ribosomal protein L6 family )

HSP 1 Score: 331.3 bits (848), Expect = 5.4e-91
Identity = 162/194 (83.51%), Postives = 180/194 (92.78%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSE+MDIPD V IKVHAK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    K+IEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIIGED 195
           GIYVSEK  I+ E+
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]
BLAST of CSPI04G09850 vs. TAIR 10
Match: AT4G10450.1 (Ribosomal protein L6 family )

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-88
Identity = 157/194 (80.93%), Postives = 178/194 (91.75%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60
           MKTILSSE+MDIPDGV IKV+AK+IEVEGPRGKL R+FKHLNLDFQLI D  TGK++L+I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120
           ++WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI   +K+IEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV I RSEKVKDE++L+GNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIIGED 195
           GIYVSEKG I  E+
Sbjct: 181 GIYVSEKGKIAVEE 194

The following BLAST results are available for this feature:
BLAST of CSPI04G09850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P307072.4e-9186.6060S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1[more]
P492097.6e-9083.5160S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3[more]
Q9SZX92.1e-8780.9360S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1[more]
P492102.2e-8481.0560S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 S... [more]
P514101.7e-5756.9260S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=2[more]
BLAST of CSPI04G09850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW254.3e-104100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124900 PE=3 SV=1[more]
A0A6J1G2311.1e-10297.9560S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111449954 PE=3... [more]
A0A1S3CHZ91.8e-10297.9560S ribosomal protein L9-like OS=Cucumis melo OX=3656 GN=LOC103501171 PE=3 SV=1[more]
A0A5D3C0B31.8e-10297.9560S ribosomal protein L9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A6J1HZM65.3e-10297.4460S ribosomal protein L9-like OS=Cucurbita maxima OX=3661 GN=LOC111467681 PE=3 S... [more]
BLAST of CSPI04G09850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137145.18.9e-104100.0060S ribosomal protein L9 [Cucumis sativus] >KGN53768.1 hypothetical protein Csa_... [more]
XP_022945825.12.2e-10297.9560S ribosomal protein L9-like [Cucurbita moschata] >XP_023542544.1 60S ribosomal... [more]
XP_008462900.13.8e-10297.95PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >XP_016902942.1 PREDICTE... [more]
XP_022968434.11.1e-10197.4460S ribosomal protein L9-like [Cucurbita maxima][more]
XP_038897570.12.4e-10197.4460S ribosomal protein L9-like [Benincasa hispida][more]
BLAST of CSPI04G09850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G33120.15.4e-9183.51Ribosomal protein L6 family [more]
AT1G33140.15.4e-9183.51Ribosomal protein L6 family [more]
AT4G10450.11.5e-8880.93Ribosomal protein L6 family [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020040Ribosomal protein L6, alpha-beta domainPFAMPF00347Ribosomal_L6coord: 12..90
e-value: 5.7E-11
score: 42.9
coord: 105..181
e-value: 3.7E-12
score: 46.7
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 1..90
e-value: 5.4E-29
score: 102.5
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 91..195
e-value: 2.1E-51
score: 174.3
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 1..90
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 91..187
IPR000702Ribosomal protein L6PIRSFPIRSF002162RPL6p_RPL6a_RPL9e_RPL9ocoord: 1..190
e-value: 1.8E-30
score: 103.7
IPR000702Ribosomal protein L6PANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 1..193
NoneNo IPR availablePANTHERPTHR11655:SF4060S RIBOSOMAL PROTEIN L9-LIKEcoord: 1..193
IPR002359Ribosomal protein L6, conserved site-2PROSITEPS00700RIBOSOMAL_L6_2coord: 166..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G09850.1CSPI04G09850.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome