CSPI04G09700 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G09700
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 7688459 .. 7688668 (+)
RNA-Seq ExpressionCSPI04G09700
SyntenyCSPI04G09700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGAGACAAAACAATCAATCAACCTAAGAAAGGTATTGAGGTCATTCATTCCGACAACCCTATATTAGAACAAGCCCATCGTAACCCCATGTCCAGTGCTGACAGTGCAATTCTTCCTAGTTCAAGTGAGATTTTAAAGACAGAAGGGCTTCGTTCTCTTGTTATCAATGGTAAAGAAGTAGTTGTAACGGATGAGAATATTTAA

mRNA sequence

ATGGCCGGAGACAAAACAATCAATCAACCTAAGAAAGGTATTGAGGTCATTCATTCCGACAACCCTATATTAGAACAAGCCCATCGTAACCCCATGTCCAGTGCTGACAGTGCAATTCTTCCTAGTTCAAGTGAGATTTTAAAGACAGAAGGGCTTCGTTCTCTTGTTATCAATGGTAAAGAAGTAGTTGTAACGGATGAGAATATTTAA

Coding sequence (CDS)

ATGGCCGGAGACAAAACAATCAATCAACCTAAGAAAGGTATTGAGGTCATTCATTCCGACAACCCTATATTAGAACAAGCCCATCGTAACCCCATGTCCAGTGCTGACAGTGCAATTCTTCCTAGTTCAAGTGAGATTTTAAAGACAGAAGGGCTTCGTTCTCTTGTTATCAATGGTAAAGAAGTAGTTGTAACGGATGAGAATATTTAA

Protein sequence

MAGDKTINQPKKGIEVIHSDNPILEQAHRNPMSSADSAILPSSSEILKTEGLRSLVINGKEVVVTDENI*
Homology
[Close]
BLAST of CSPI04G09700 vs. ExPASy TrEMBL
Match: A0A0A0L0T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G122805 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-28
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 1  MAGDKTINQPKKGIEVIHSDNPILEQAHRNPMSSADSAILPSSSEILKTEGLRSLVINGK 60
          MAGDKTINQPKKGIEVIHSDNP+LEQAHRNPMSSAD AILPSSSEILKTEGLRSLVINGK
Sbjct: 1  MAGDKTINQPKKGIEVIHSDNPVLEQAHRNPMSSADIAILPSSSEILKTEGLRSLVINGK 60

Query: 61 EVVVTDENI 70
          EVVVTDENI
Sbjct: 61 EVVVTDENI 69

[Close]
BLAST of CSPI04G09700 vs. NCBI nr
Match: KGN53756.1 (hypothetical protein Csa_014832 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 6.4e-28
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 1  MAGDKTINQPKKGIEVIHSDNPILEQAHRNPMSSADSAILPSSSEILKTEGLRSLVINGK 60
          MAGDKTINQPKKGIEVIHSDNP+LEQAHRNPMSSAD AILPSSSEILKTEGLRSLVINGK
Sbjct: 1  MAGDKTINQPKKGIEVIHSDNPVLEQAHRNPMSSADIAILPSSSEILKTEGLRSLVINGK 60

Query: 61 EVVVTDENI 70
          EVVVTDENI
Sbjct: 61 EVVVTDENI 69

The following BLAST results are available for this feature:
BLAST of CSPI04G09700 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G09700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0T83.1e-2897.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G122805 PE=4 SV=1[more]
BLAST of CSPI04G09700 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53756.16.4e-2897.10hypothetical protein Csa_014832 [Cucumis sativus][more]
BLAST of CSPI04G09700 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G09700.1CSPI04G09700.1mRNA