CSPI04G09510 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTATCCCCTTCTTGCTCTGTTCAAATGATTAAGTCATCGCTAAATGACATTGATCAGAATTCTTTTGGAAATTCTTGTCCAGGTGGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTATTCCCAATATGAGAATGGATTCTCTGCATTTGATCTGTGTATGTCTTCGGTTCATGTTGGCTTTATTGCAATTATATTTTGTTGTGTGTTTTCGGTCTTTTCTTCTTGCTAAAGTGCTTAGCGTTATTGATTTTCTTGTATTTTCAATAGGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGACTCCAGAGTGGATGTCAGTGGGTAAGTTTTGTTTGTTAAATAGGTTGAAGCTTCTTTTCTGTGTGTCATAA ATGGCTGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTGGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTATTCCCAATATGAGAATGGATTCTCTGCATTTGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGACTCCAGAGTGGATGTCAGTGGGTAAGTTTTGTTTGTTAAATAGGTTGAAGCTTCTTTTCTGTGTGTCATAA ATGGCTGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTGGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTATTCCCAATATGAGAATGGATTCTCTGCATTTGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGACTCCAGAGTGGATGTCAGTGGGTAAGTTTTGTTTGTTAAATAGGTTGAAGCTTCTTTTCTGTGTGTCATAA MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVGKFCLLNRLKLLFCVS* Homology
BLAST of CSPI04G09510 vs. ExPASy Swiss-Prot
Match: Q9C7A8 (DNA replication complex GINS protein PSF2 OS=Arabidopsis thaliana OX=3702 GN=GINS2 PE=2 SV=2) HSP 1 Score: 125.6 bits (314), Expect = 3.1e-28 Identity = 54/79 (68.35%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy Swiss-Prot
Match: Q9Y248 (DNA replication complex GINS protein PSF2 OS=Homo sapiens OX=9606 GN=GINS2 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.5e-17 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy Swiss-Prot
Match: Q7ZT46 (DNA replication complex GINS protein PSF2 OS=Xenopus laevis OX=8355 GN=gins2 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.5e-17 Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy Swiss-Prot
Match: Q9D600 (DNA replication complex GINS protein PSF2 OS=Mus musculus OX=10090 GN=Gins2 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 5.5e-17 Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy Swiss-Prot
Match: Q54BL9 (Probable DNA replication complex GINS protein PSF2 OS=Dictyostelium discoideum OX=44689 GN=gins2 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.6e-16 Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy TrEMBL
Match: A0A0A0KVY8 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G114190 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 9.7e-49 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy TrEMBL
Match: A0A1S4E3Y0 (DNA replication complex GINS protein PSF2 OS=Cucumis melo OX=3656 GN=LOC103501165 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.9e-38 Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy TrEMBL
Match: A0A5D3C8I7 (DNA replication complex GINS protein PSF2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00350 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.9e-38 Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy TrEMBL
Match: A0A6J1HN13 (DNA replication complex GINS protein PSF2 OS=Cucurbita maxima OX=3661 GN=LOC111466105 PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 6.5e-37 Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of CSPI04G09510 vs. ExPASy TrEMBL
Match: A0A6J1HPD8 (DNA replication complex GINS protein PSF2 OS=Cucurbita maxima OX=3661 GN=LOC111466105 PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 6.5e-37 Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of CSPI04G09510 vs. NCBI nr
Match: XP_004137154.1 (DNA replication complex GINS protein PSF2 [Cucumis sativus] >KAE8649312.1 hypothetical protein Csa_014994 [Cucumis sativus]) HSP 1 Score: 171.0 bits (432), Expect = 4.9e-39 Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of CSPI04G09510 vs. NCBI nr
Match: XP_038905117.1 (DNA replication complex GINS protein PSF2 isoform X1 [Benincasa hispida] >XP_038905118.1 DNA replication complex GINS protein PSF2 isoform X1 [Benincasa hispida] >XP_038905119.1 DNA replication complex GINS protein PSF2 isoform X1 [Benincasa hispida]) HSP 1 Score: 168.3 bits (425), Expect = 3.2e-38 Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of CSPI04G09510 vs. NCBI nr
Match: XP_008462891.1 (PREDICTED: DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo] >XP_016902941.1 PREDICTED: DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo]) HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37 Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of CSPI04G09510 vs. NCBI nr
Match: TYK07564.1 (DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37 Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of CSPI04G09510 vs. NCBI nr
Match: XP_022925113.1 (DNA replication complex GINS protein PSF2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36 Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of CSPI04G09510 vs. TAIR 10
Match: AT3G12530.1 (PSF2 ) HSP 1 Score: 125.6 bits (314), Expect = 2.2e-29 Identity = 54/79 (68.35%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of CSPI04G09510 vs. TAIR 10
Match: AT3G12530.2 (PSF2 ) HSP 1 Score: 94.7 bits (234), Expect = 4.2e-20 Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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