CSPI04G08780 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G08780
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein TRANSPARENT TESTA GLABRA 1
Location	Chr4: 6532946 .. 6534550 (-)
RNA-Seq Expression	CSPI04G08780
Synteny	CSPI04G08780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACTTGACTATTCTCCCCAATTTGTGGACGTTGTTGAGATTTTGGGTCAGTTCGGGGGATTTTCCTTATGACTTCGCACCGCCTGCCTCCTACTTTTCCATCCTCAACGCGTTCCACAATTTTTCCATTTCGTTTTTATTTTTCTGAGCAAAGCCATCGTTCGACAGTCGCCATCTCGTCGGCGTTCCGTGTACCGATCATCAGTTCGTCCTTCATTGTCTCTCTCACTCTATTCCATCGTTCTTCGCTTTTGGAATCATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTACATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAACTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGAGGACTGAGAACATTTTCCACTGTGCCTCTACCTACTGTGCATCTACTGTCATATCCTTACCTTTTGTTTTTCAATCACGTTATATAAGCCTGATGTCTTCCTATAAGTTTAGTTTTACGTTAGTGCTAAGTTGTTACTAGGCTAATATAAATGTTGGTGCTTCTTCTGGCTAACAGACAACACATTCTATGTTAACTCGCTTGAATTCTTGAAATTCAATCAAAACTTAAGTAGGCCACTTTCTTGTTTAAGTTAAAGCTGATATTTTGTTTGAATTGTTTATTTTATATGCATTACATGAGGCCGTAACAGCCTTTATTGAGTTGTAACGCAATGTAACCCC

mRNA sequence

CGAACTTGACTATTCTCCCCAATTTGTGGACGTTGTTGAGATTTTGGGTCAGTTCGGGGGATTTTCCTTATGACTTCGCACCGCCTGCCTCCTACTTTTCCATCCTCAACGCGTTCCACAATTTTTCCATTTCGTTTTTATTTTTCTGAGCAAAGCCATCGTTCGACAGTCGCCATCTCGTCGGCGTTCCGTGTACCGATCATCAGTTCGTCCTTCATTGTCTCTCTCACTCTATTCCATCGTTCTTCGCTTTTGGAATCATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTACATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAACTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGAGGACTGAGAACATTTTCCACTGTGCCTCTACCTACTGTGCATCTACTGTCATATCCTTACCTTTTGTTTTTCAATCACGTTATATAAGCCTGATGTCTTCCTATAAGTTTAGTTTTACGTTAGTGCTAAGTTGTTACTAGGCTAATATAAATGTTGGTGCTTCTTCTGGCTAACAGACAACACATTCTATGTTAACTCGCTTGAATTCTTGAAATTCAATCAAAACTTAAGTAGGCCACTTTCTTGTTTAAGTTAAAGCTGATATTTTGTTTGAATTGTTTATTTTATATGCATTACATGAGGCCGTAACAGCCTTTATTGAGTTGTAACGCAATGTAACCCC

Coding sequence (CDS)

ATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTACATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAACTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGA

Protein sequence

MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV*

Homology

[Close]

BLAST of CSPI04G08780 vs. ExPASy Swiss-Prot
Match: Q9XGN1 (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 9.2e-152
Identity = 262/335 (78.21%), Postives = 298/335 (88.96%), Query Frame = 0


Query: 6   SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 65
           SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10  SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 66  ANPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKLGD--SSIEPLSLLNNS 125
             P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++EP+S+LNNS
Sbjct: 70  PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 126 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 185
           KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 186 RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 245
           RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 246 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPM 305
           ILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP VAGPNGIDPM
Sbjct: 250 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPM 309

Query: 306 SMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           S+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 310 SVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of CSPI04G08780 vs. ExPASy Swiss-Prot
Match: Q9LPV9 (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.7e-113
Identity = 205/334 (61.38%), Postives = 255/334 (76.35%), Query Frame = 0


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           RSE + TYE+P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRR----DKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  NPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKLGD--SSIEPLSLLNNSKTS 126
           +P+LSFEHPYPPTK +F P        LLA+S D LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of CSPI04G08780 vs. ExPASy Swiss-Prot
Match: Q38960 (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 5.4e-112
Identity = 203/339 (59.88%), Postives = 254/339 (74.93%), Query Frame = 0


Query: 2   EHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 61
           E  + RSE + TYE+P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRR----DKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  ISIKANPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKLGD--SSIEPLSLLN 121
             I+++P+L FEHPYPPTK  F P        LLA+S D LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 IVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           IV+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of CSPI04G08780 vs. ExPASy Swiss-Prot
Match: Q552R1 (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 342.8 bits (878), Expect = 4.3e-93
Identity = 182/327 (55.66%), Postives = 233/327 (71.25%), Query Frame = 0


Query: 13  TYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSF 72
           TY SP  +Y ++ SS     +N   R+A+GSF+E+Y NRVD++  + ++   +      F
Sbjct: 8   TYNSPWVIYGLSWSS----RVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGF 67

Query: 73  EHPYPPTKLMFNPSPLSS---LLASSGDSLRLWKLGDS--SIEPLSLLNNSKTSEFCAPL 132
           EHPYPPTK M+ P   S+   LLA++GD LRLW++G +  SI+  SLL N   SEFCAPL
Sbjct: 68  EHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFCAPL 127

Query: 133 TSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFASVSA 192
           +SFDWNE +P  + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FASV A
Sbjct: 128 SSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGA 187

Query: 193 DGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPS 252
           DGS+R+FD+R+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS K++ILDIR PS
Sbjct: 188 DGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPS 247

Query: 253 VPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAFE 312
           VP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A  E
Sbjct: 248 VPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNALAE 307

Query: 313 INQLQWSAAQPDWIALAFSNKMQLLKV 334
           INQL WS++QPDWIA+AFS+ +Q+LKV
Sbjct: 308 INQLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]

BLAST of CSPI04G08780 vs. ExPASy Swiss-Prot
Match: P61962 (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.5e-90
Identity = 179/339 (52.80%), Postives = 226/339 (66.67%), Query Frame = 0


Query: 14  YESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSFE 73
           YE+P  +YAM  S           R+ALGSFVEEYNN+V +V  D +S         +F+
Sbjct: 13  YEAPWTVYAMNWSVRPDKRF----RLALGSFVEEYNNKVQLVGLDEESSEFICRN--TFD 72

Query: 74  HPYPPTKLMFNPSP---LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTSEFCAPLTSF 133
           HPYP TKLM+ P        LLA+SGD LR+W++G++      LLNN+K S+FCAPLTSF
Sbjct: 73  HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 132

Query: 134 DWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWGEA- 193
           DWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+  A 
Sbjct: 133 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 192

Query: 194 ---RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 253
               +FASV ADGSVR+FD+R  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ MD  
Sbjct: 193 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGM 252

Query: 254 KIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGI 313
           ++VILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P  I
Sbjct: 253 EVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--PRAI 312

Query: 314 -DPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+V
Sbjct: 313 EDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]

BLAST of CSPI04G08780 vs. ExPASy TrEMBL
Match: B7SBL6 (WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.0e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of CSPI04G08780 vs. ExPASy TrEMBL
Match: A0A5D3BFF9 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00330 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 4.5e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of CSPI04G08780 vs. ExPASy TrEMBL
Match: A0A5A7TV10 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001300 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 4.5e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of CSPI04G08780 vs. ExPASy TrEMBL
Match: A0A1S3C1G5 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 4.5e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of CSPI04G08780 vs. ExPASy TrEMBL
Match: A0A6J1E766 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561 PE=4 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 8.8e-174
Identity = 305/339 (89.97%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AA RSEF+ATY+SPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120
           S+SI+ +PSLSF+HPYPPTKLMFNP  LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]

BLAST of CSPI04G08780 vs. NCBI nr
Match: NP_001267687.1 (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat protein [Cucumis sativus] >KGN53658.1 hypothetical protein Csa_014980 [Cucumis sativus])

HSP 1 Score: 674.1 bits (1738), Expect = 6.2e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of CSPI04G08780 vs. NCBI nr
Match: KAA0045351.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa])

HSP 1 Score: 660.2 bits (1702), Expect = 9.3e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of CSPI04G08780 vs. NCBI nr
Match: TYJ96928.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa])

HSP 1 Score: 660.2 bits (1702), Expect = 9.3e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of CSPI04G08780 vs. NCBI nr
Match: XP_008455615.1 (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 660.2 bits (1702), Expect = 9.3e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of CSPI04G08780 vs. NCBI nr
Match: XP_038906093.1 (protein TRANSPARENT TESTA GLABRA 1 [Benincasa hispida])

HSP 1 Score: 645.2 bits (1663), Expect = 3.1e-181
Identity = 315/333 (94.59%), Postives = 325/333 (97.60%), Query Frame = 0


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           M++A SRSEFL TY+SPHPLYAMAISSPH+HSLNF +RIALGSF+EEY NRVDIVSFDPD
Sbjct: 1   MQNADSRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFIEEYTNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIKA+PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFS KMQLLKV
Sbjct: 301 YSATHEINQLQWSAAQPDWIALAFSKKMQLLKV 333

[Close]

BLAST of CSPI04G08780 vs. TAIR 10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 537.7 bits (1384), Expect = 6.5e-153
Identity = 262/335 (78.21%), Postives = 298/335 (88.96%), Query Frame = 0


Query: 6   SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 65
           SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10  SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 66  ANPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKLGD--SSIEPLSLLNNS 125
             P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++EP+S+LNNS
Sbjct: 70  PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 126 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 185
           KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 186 RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 245
           RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 246 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPM 305
           ILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP VAGPNGIDPM
Sbjct: 250 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPM 309

Query: 306 SMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           S+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 310 SVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of CSPI04G08780 vs. TAIR 10
Match: AT5G24520.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 537.7 bits (1384), Expect = 6.5e-153
Identity = 262/335 (78.21%), Postives = 298/335 (88.96%), Query Frame = 0


Query: 6   SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 65
           SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10  SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 66  ANPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKLGD--SSIEPLSLLNNS 125
             P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++EP+S+LNNS
Sbjct: 70  PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 126 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 185
           KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 186 RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 245
           RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 246 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPM 305
           ILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP VAGPNGIDPM
Sbjct: 250 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPM 309

Query: 306 SMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           S+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 310 SVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of CSPI04G08780 vs. TAIR 10
Match: AT5G24520.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 537.7 bits (1384), Expect = 6.5e-153
Identity = 262/335 (78.21%), Postives = 298/335 (88.96%), Query Frame = 0


Query: 6   SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 65
           SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10  SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 66  ANPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKLGD--SSIEPLSLLNNS 125
             P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++EP+S+LNNS
Sbjct: 70  PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 126 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 185
           KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 186 RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 245
           RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 246 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPM 305
           ILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP VAGPNGIDPM
Sbjct: 250 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPM 309

Query: 306 SMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           S+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 310 SVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of CSPI04G08780 vs. TAIR 10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 410.6 bits (1054), Expect = 1.2e-114
Identity = 205/334 (61.38%), Postives = 255/334 (76.35%), Query Frame = 0


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           RSE + TYE+P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRR----DKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  NPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKLGD--SSIEPLSLLNNSKTS 126
           +P+LSFEHPYPPTK +F P        LLA+S D LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of CSPI04G08780 vs. TAIR 10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 3.9e-113
Identity = 203/339 (59.88%), Postives = 254/339 (74.93%), Query Frame = 0


Query: 2   EHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 61
           E  + RSE + TYE+P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRR----DKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  ISIKANPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKLGD--SSIEPLSLLN 121
             I+++P+L FEHPYPPTK  F P        LLA+S D LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 IVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           IV+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

The following BLAST results are available for this feature:

BLAST of CSPI04G08780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XGN1	9.2e-152	78.21	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
Q9LPV9	1.7e-113	61.38	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
Q38960	5.4e-112	59.88	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
Q552R1	4.3e-93	55.66	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ...	[more]
P61962	4.5e-90	52.80	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]

BLAST of CSPI04G08780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B7SBL6	3.0e-190	100.00	WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1	[more]
A0A5D3BFF9	4.5e-186	97.90	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7TV10	4.5e-186	97.90	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3C1G5	4.5e-186	97.90	protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 ...	[more]
A0A6J1E766	8.8e-174	89.97	protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561...	[more]

BLAST of CSPI04G08780 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267687.1	6.2e-190	100.00	protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat ...	[more]
KAA0045351.1	9.3e-186	97.90	protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa]	[more]
TYJ96928.1	9.3e-186	97.90	protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa]	[more]
XP_008455615.1	9.3e-186	97.90	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo]	[more]
XP_038906093.1	3.1e-181	94.59	protein TRANSPARENT TESTA GLABRA 1 [Benincasa hispida]	[more]

BLAST of CSPI04G08780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24520.1	6.5e-153	78.21	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.3	6.5e-153	78.21	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.2	6.5e-153	78.21	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	1.2e-114	61.38	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	3.9e-113	59.88	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 156..194 e-value: 1.4E-4 score: 31.3 coord: 245..285 e-value: 1.2E-5 score: 34.8 coord: 108..153 e-value: 2.0 score: 15.2 coord: 65..103 e-value: 8.9 score: 11.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 249..284 e-value: 0.025 score: 15.5 coord: 163..194 e-value: 0.094 score: 13.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 252..286 score: 9.739832
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 163..203 score: 9.305395
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 11..331 e-value: 2.2E-38 score: 134.3
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 8..333
IPR031104	Protein TRANSPARENT TESTA GLABRA 1	PANTHER	PTHR19919:SF10	PROTEIN TRANSPARENT TESTA GLABRA 1	coord: 8..333
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 272..286
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 38..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G08780.1	CSPI04G08780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding