CSPI04G08460 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G08460
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Zinc finger protein 36 C3H type-like 3
Location	Chr4: 6207804 .. 6208810 (-)
RNA-Seq Expression	CSPI04G08460
Synteny	CSPI04G08460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGACGGAAGGAGTAATGGCGGCGGCAGAATCAAAGATGAGGATTTTGATCTAGGAGGCAGAGCGAATTACTTGGAGACATGATGTGTATTGATTACTGATGGGTATGGCTCTGCCTCCGTCGACGAATCAACGGAGGCAGACGAGCGGAGATGTGATGGCTAGAATCCTATAAGGCGAAAACCCTAGAGCTCTGATACCATGTTGATTTTATGGAATTAATCTATATTTCAT

mRNA sequence

ATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGACGGAAGGAGTAATGGCGGCGGCAGAATCAAAGATGAGGATTTTGATCTAGGAGGCAGAGCGAATTACTTGGAGACATGATGTGTATTGATTACTGATGGGTATGGCTCTGCCTCCGTCGACGAATCAACGGAGGCAGACGAGCGGAGATGTGATGGCTAGAATCCTATAAGGCGAAAACCCTAGAGCTCTGATACCATGTTGATTTTATGGAATTAATCTATATTTCAT

Coding sequence (CDS)

ATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGACGGAAGGAGTAATGGCGGCGGCAGAATCAAAGATGAGGATTTTGATCTAG

Protein sequence

MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMTEGVMAAAESKMRILI*

Homology

[Close]

BLAST of CSPI04G08460 vs. ExPASy TrEMBL
Match: A0A401THR0 (Uncharacterized protein (Fragment) OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0026181 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.3e-41
Identity = 124/272 (45.59%), Postives = 206/272 (75.74%), Query Frame = 0


Query: 1   MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 60
           +A+GA +A+GAV+A+GAV+A+GAV+A+G V+A+GA +A+GA +A+GA +A+GA +A+GA 
Sbjct: 6   IADGAAIADGAVIADGAVVADGAVVADGTVVADGAALADGAALADGATVADGAPVADGAA 65

Query: 61  MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 120
           +A+G V+A    +A+GAV+A+GA +A G  +A GA +A+GA +A G  +A+GA +A+G V
Sbjct: 66  VADGTVVANANAVADGAVIADGAAVANGTAIAAGAAVADGAAIAHGTALADGAAVADGTV 125

Query: 121 MAEGAVMAE---GAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG---AV 180
           +A+G  +A+   GA +A GA +A+GA +A+G  +A+ A +A+G  +A+GA +A+G   A 
Sbjct: 126 VADGDAIADGAAGAAVAAGAAVADGAAVADGTAIADAAAIADGTAIADGAAIADGTAIAA 185

Query: 181 MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 240
           +A+GAV+A+G  +A+GA +A+G  +A+GA +A+GA +A+G  +A+GAV+A+G  +A+GA 
Sbjct: 186 IADGAVIADGTAVADGAAVADGTAVADGAAVADGAAIADGTAVADGAVIADGTAVADGAA 245

Query: 241 MAEGAVMAEGAVMAEGAVMAEGAVMTEGVMAA 267
           +A+G  +A GA +A+GAV+ +GA + +G   A
Sbjct: 246 IADGTAVAVGAAVADGAVIVDGAAIVDGAAVA 277

[Close]

BLAST of CSPI04G08460 vs. ExPASy TrEMBL
Match: A0A3P9KCY3 (Uncharacterized protein OS=Oryzias latipes OX=8090 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-39
Identity = 96/261 (36.78%), Postives = 225/261 (86.21%), Query Frame = 0


Query: 2   AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 61
           ++G+V ++G+V ++G V++EG+V ++G+V++EG+V ++G+V ++G+V ++G V ++G+V 
Sbjct: 55  SQGSVFSQGSVFSQGNVLSEGSVFSQGSVLSEGSVFSQGSVFSQGSVFSQGGVFSQGSVF 114

Query: 62  AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 121
           ++G+V ++G+V ++G+V++EG+V ++G+V ++G+V ++G V ++G+V ++G+V ++G V+
Sbjct: 115 SQGSVFSQGSVFSQGSVLSEGSVFSQGSVFSQGSVFSQGGVFSQGSVFSQGSVFSQGNVL 174

Query: 122 AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 181
           +EG+V ++G+V++EG+V++EG+V ++G+V+++G+V ++G+V+++G+V+++G+V ++G+V 
Sbjct: 175 SEGSVFSQGSVLSEGSVLSEGSVFSQGSVVSQGSVFSQGSVVSQGSVVSQGSVFSQGSVF 234

Query: 182 AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 241
           ++G+V+++G+V++EG+V ++G V + G+V ++G+V ++G+V+++G+V+++G+V +EG+V 
Sbjct: 235 SQGSVVSQGSVLSEGSVFSQGGVFSHGSVFSQGSVFSQGSVVSQGSVVSQGSVFSEGSVF 294

Query: 242 AEGAVMAEGAVMAEGAVMTEG 263
           ++G V ++G+V ++G+V++EG
Sbjct: 295 SQGGVFSQGSVFSQGSVLSEG 315

[Close]

BLAST of CSPI04G08460 vs. ExPASy TrEMBL
Match: A0A2A4JID5 (Uncharacterized protein OS=Heliothis virescens OX=7102 GN=B5V51_1814 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.9e-34
Identity = 139/284 (48.94%), Postives = 160/284 (56.34%), Query Frame = 0


Query: 2    AEGAVMAEGAVMAEGAVMAEGAV---------------MAEGAVMAEGAVMAEGAVMAEG 61
            AE AV +E AV  + A   EGA+                 EG V  EG  + +  V ++ 
Sbjct: 1309 AENAVTSETAVTTDSAATTEGALTTTEGGALTTEGAASTTEGTVTTEGTAITDSGVTSKS 1368

Query: 62   AVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG 121
            AV  +  V  + AV  EGAV  EGA+  EGAV  EGA   +GAV  +G V  EGAV  EG
Sbjct: 1369 AVTTDNGVTTDSAVTTEGAVTTEGAITTEGAVTTEGAATTQGAVTTQGVVTTEGAVTTEG 1428

Query: 122  AVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG 181
            AV  EGAV  +GAV  E AV  +GAV  EGAV  +GAV  EGAV  EGAV  +GAV  EG
Sbjct: 1429 AVTTEGAVTTKGAVPTESAVTTQGAVSTEGAVTIKGAVTTEGAVTTEGAVTTKGAVTTEG 1488

Query: 182  AVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG 241
            AV  EGAV  EGAV   GAV AEGA   EGAV  EGAV  EGAV  EGAV  EGAV  E 
Sbjct: 1489 AVTTEGAVTTEGAVTTVGAVTAEGAGTTEGAVTTEGAVTTEGAVTTEGAVTTEGAVTTEA 1548

Query: 242  AVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMTEGVMAAAESK 271
            AV   GA++ + AV  E A   EG V  EG V TEG +   ES+
Sbjct: 1549 AVTTAGAMITKSAVTTEDAETTEGEVTTEGTVTTEGAVTTIESR 1592

[Close]

BLAST of CSPI04G08460 vs. ExPASy TrEMBL
Match: A0A662YYC1 (Uncharacterized protein OS=Acipenser ruthenus OX=7906 GN=EOD39_5459 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.1e-34
Identity = 114/242 (47.11%), Postives = 156/242 (64.46%), Query Frame = 0


Query: 1   MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 60
           M+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+   VM+ G VM+ G V
Sbjct: 1   MSNGVVMSNGVVMSNGVVMSNGVVMSNGMVMSNGMVMSNGVVMSNSVVMSNGMVMSNGMV 60

Query: 61  MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 120
           M+ G VM+ G VM+ G VM+   VM+ G VM+ G VM+ G VM+   VM+   VM+ G +
Sbjct: 61  MSNGMVMSNGVVMSNGMVMSNSVVMSNGMVMSNGVVMSNGVVMSNSVVMSNSMVMSNGVM 120

Query: 121 MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 180
           M+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+   VM+ G VM+ G V
Sbjct: 121 MSNGMVMSNGVVMSNGVVMSNGVVMSNGMVMSNGMVMSNGVVMSNSVVMSNGMVMSNGMV 180

Query: 181 MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 240
           M+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+   VM+ G VM+ G VM+ G V
Sbjct: 181 MSNGMVMSNGVVMSNGVVMSNGMVMSNGVVMSNGVVMSNSMVMSNGMVMSNGVVMSNGMV 240

Query: 241 MA 243
           M+
Sbjct: 241 MS 242

[Close]

BLAST of CSPI04G08460 vs. ExPASy TrEMBL
Match: A0A401TLU7 (Uncharacterized protein (Fragment) OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0027962 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.7e-34
Identity = 110/269 (40.89%), Postives = 192/269 (71.38%), Query Frame = 0


Query: 2   AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 61
           A+GA +A+G  +A+GA +A+ A +A+G  +A+GA +A+GAV+A+G   A+GA +A+G  +
Sbjct: 11  ADGAAIADGTAIADGAAVADDAAIADGTAIADGAAIADGAVVADGTANADGAAIADGTTI 70

Query: 62  AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 121
           A+G  +A+G  +A+G  +A+G  +A+G  +A+GA +A+GA  A G  +A+GA +A+GAV+
Sbjct: 71  ADGIAIADGTAVADGIAIADGTAVADGIAIADGAAVADGATTANGVDVADGAAVADGAVV 130

Query: 122 AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 181
           A+G  +A+G  +A+G   A+GA +A+GA +A G  +A+GA +A+G  +A+G  +A+G+ +
Sbjct: 131 ADGVTIADGVAVADG---ADGAALADGAAIAVGTALADGAAVADGTAIADGTAVADGSAV 190

Query: 182 ---AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG 241
              A+GA +A+G  +A+GA +A+G  +A+G  +A+GA +A+GAV+A+GA +A+G  +A  
Sbjct: 191 VDGADGAAVADGVALADGAAVADGTSVADGVDVADGAAVADGAVVADGAAIADGTAIANV 250

Query: 242 AVMAEGAVMAEGAVMAEGAVMTEGVMAAA 268
           A +A+G  +A+G  +A+GA + +G   AA
Sbjct: 251 AAVADGTAIADGVAVADGAAVVDGADGAA 276

[Close]

BLAST of CSPI04G08460 vs. NCBI nr
Match: GCC42153.1 (hypothetical protein [Chiloscyllium punctatum])

HSP 1 Score: 178.3 bits (451), Expect = 8.9e-41
Identity = 124/272 (45.59%), Postives = 206/272 (75.74%), Query Frame = 0


Query: 1   MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 60
           +A+GA +A+GAV+A+GAV+A+GAV+A+G V+A+GA +A+GA +A+GA +A+GA +A+GA 
Sbjct: 6   IADGAAIADGAVIADGAVVADGAVVADGTVVADGAALADGAALADGATVADGAPVADGAA 65

Query: 61  MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 120
           +A+G V+A    +A+GAV+A+GA +A G  +A GA +A+GA +A G  +A+GA +A+G V
Sbjct: 66  VADGTVVANANAVADGAVIADGAAVANGTAIAAGAAVADGAAIAHGTALADGAAVADGTV 125

Query: 121 MAEGAVMAE---GAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG---AV 180
           +A+G  +A+   GA +A GA +A+GA +A+G  +A+ A +A+G  +A+GA +A+G   A 
Sbjct: 126 VADGDAIADGAAGAAVAAGAAVADGAAVADGTAIADAAAIADGTAIADGAAIADGTAIAA 185

Query: 181 MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 240
           +A+GAV+A+G  +A+GA +A+G  +A+GA +A+GA +A+G  +A+GAV+A+G  +A+GA 
Sbjct: 186 IADGAVIADGTAVADGAAVADGTAVADGAAVADGAAIADGTAVADGAVIADGTAVADGAA 245

Query: 241 MAEGAVMAEGAVMAEGAVMAEGAVMTEGVMAA 267
           +A+G  +A GA +A+GAV+ +GA + +G   A
Sbjct: 246 IADGTAVAVGAAVADGAVIVDGAAIVDGAAVA 277

[Close]

BLAST of CSPI04G08460 vs. NCBI nr
Match: PCG71468.1 (hypothetical protein B5V51_1814 [Heliothis virescens])

HSP 1 Score: 155.2 bits (391), Expect = 8.1e-34
Identity = 139/284 (48.94%), Postives = 160/284 (56.34%), Query Frame = 0


Query: 2    AEGAVMAEGAVMAEGAVMAEGAV---------------MAEGAVMAEGAVMAEGAVMAEG 61
            AE AV +E AV  + A   EGA+                 EG V  EG  + +  V ++ 
Sbjct: 1309 AENAVTSETAVTTDSAATTEGALTTTEGGALTTEGAASTTEGTVTTEGTAITDSGVTSKS 1368

Query: 62   AVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG 121
            AV  +  V  + AV  EGAV  EGA+  EGAV  EGA   +GAV  +G V  EGAV  EG
Sbjct: 1369 AVTTDNGVTTDSAVTTEGAVTTEGAITTEGAVTTEGAATTQGAVTTQGVVTTEGAVTTEG 1428

Query: 122  AVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG 181
            AV  EGAV  +GAV  E AV  +GAV  EGAV  +GAV  EGAV  EGAV  +GAV  EG
Sbjct: 1429 AVTTEGAVTTKGAVPTESAVTTQGAVSTEGAVTIKGAVTTEGAVTTEGAVTTKGAVTTEG 1488

Query: 182  AVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG 241
            AV  EGAV  EGAV   GAV AEGA   EGAV  EGAV  EGAV  EGAV  EGAV  E 
Sbjct: 1489 AVTTEGAVTTEGAVTTVGAVTAEGAGTTEGAVTTEGAVTTEGAVTTEGAVTTEGAVTTEA 1548

Query: 242  AVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMTEGVMAAAESK 271
            AV   GA++ + AV  E A   EG V  EG V TEG +   ES+
Sbjct: 1549 AVTTAGAMITKSAVTTEDAETTEGEVTTEGTVTTEGAVTTIESR 1592

[Close]

BLAST of CSPI04G08460 vs. NCBI nr
Match: RXN01721.1 (hypothetical protein EOD39_5459 [Acipenser ruthenus])

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-33
Identity = 114/242 (47.11%), Postives = 156/242 (64.46%), Query Frame = 0


Query: 1   MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 60
           M+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+   VM+ G VM+ G V
Sbjct: 1   MSNGVVMSNGVVMSNGVVMSNGVVMSNGMVMSNGMVMSNGVVMSNSVVMSNGMVMSNGMV 60

Query: 61  MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 120
           M+ G VM+ G VM+ G VM+   VM+ G VM+ G VM+ G VM+   VM+   VM+ G +
Sbjct: 61  MSNGMVMSNGVVMSNGMVMSNSVVMSNGMVMSNGVVMSNGVVMSNSVVMSNSMVMSNGVM 120

Query: 121 MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 180
           M+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+   VM+ G VM+ G V
Sbjct: 121 MSNGMVMSNGVVMSNGVVMSNGVVMSNGMVMSNGMVMSNGVVMSNSVVMSNGMVMSNGMV 180

Query: 181 MAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAV 240
           M+ G VM+ G VM+ G VM+ G VM+ G VM+ G VM+   VM+ G VM+ G VM+ G V
Sbjct: 181 MSNGMVMSNGVVMSNGVVMSNGMVMSNGVVMSNGVVMSNSMVMSNGMVMSNGVVMSNGMV 240

Query: 241 MA 243
           M+
Sbjct: 241 MS 242

[Close]

BLAST of CSPI04G08460 vs. NCBI nr
Match: GCC43617.1 (hypothetical protein [Chiloscyllium punctatum])

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-33
Identity = 110/269 (40.89%), Postives = 192/269 (71.38%), Query Frame = 0


Query: 2   AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 61
           A+GA +A+G  +A+GA +A+ A +A+G  +A+GA +A+GAV+A+G   A+GA +A+G  +
Sbjct: 11  ADGAAIADGTAIADGAAVADDAAIADGTAIADGAAIADGAVVADGTANADGAAIADGTTI 70

Query: 62  AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 121
           A+G  +A+G  +A+G  +A+G  +A+G  +A+GA +A+GA  A G  +A+GA +A+GAV+
Sbjct: 71  ADGIAIADGTAVADGIAIADGTAVADGIAIADGAAVADGATTANGVDVADGAAVADGAVV 130

Query: 122 AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 181
           A+G  +A+G  +A+G   A+GA +A+GA +A G  +A+GA +A+G  +A+G  +A+G+ +
Sbjct: 131 ADGVTIADGVAVADG---ADGAALADGAAIAVGTALADGAAVADGTAIADGTAVADGSAV 190

Query: 182 ---AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEG 241
              A+GA +A+G  +A+GA +A+G  +A+G  +A+GA +A+GAV+A+GA +A+G  +A  
Sbjct: 191 VDGADGAAVADGVALADGAAVADGTSVADGVDVADGAAVADGAVVADGAAIADGTAIANV 250

Query: 242 AVMAEGAVMAEGAVMAEGAVMTEGVMAAA 268
           A +A+G  +A+G  +A+GA + +G   AA
Sbjct: 251 AAVADGTAIADGVAVADGAAVVDGADGAA 276

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BLAST of CSPI04G08460 vs. NCBI nr
Match: GCB69643.1 (hypothetical protein [Scyliorhinus torazame])

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-33
Identity = 110/265 (41.51%), Postives = 157/265 (59.25%), Query Frame = 0


Query: 2   AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 61
           AEG + A+G + AEG +  EG + AEG + AEG +  EG +  EG + AEG +  EG++ 
Sbjct: 36  AEGDIAAKGNIAAEGDIAGEGGIAAEGNIAAEGNIAGEGGIATEGNIAAEGGIATEGSIA 95

Query: 62  AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 121
            EG +  EG +  EG +  EG +  EG +  EG + AEG + AEG +  EG + AEG + 
Sbjct: 96  GEGGIATEGNIAGEGGIAPEGNIAGEGGIATEGDITAEGNIAAEGDIAGEGGIAAEGDIA 155

Query: 122 AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 181
           AEG + AEG +  EG + AEG + AEG + AEG +  EG + AEG +  EG +  EG + 
Sbjct: 156 AEGDISAEGDIAGEGGIAAEGDIAAEGDISAEGNIAGEGDIAAEGDIAPEGIIAGEGGIA 215

Query: 182 AEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVMAEGAVM 241
            EG + AEG +  EG + AEG +  EG +  EG +  EG +  EG +  EG + AEG + 
Sbjct: 216 TEGNIAAEGGIATEGNIAAEGGIATEGNIAGEGGIATEGIIAGEGGIATEGNITAEGDIS 275

Query: 242 AEGAVMAEGAVMAEGAVMTEGVMAA 267
           AEG + AEG + AEG + TEG +A+
Sbjct: 276 AEGNIAAEGDIAAEGNIATEGNIAS 300

The following BLAST results are available for this feature:

BLAST of CSPI04G08460 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G08460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A401THR0	4.3e-41	45.59	Uncharacterized protein (Fragment) OS=Chiloscyllium punctatum OX=137246 GN=chiPu...	[more]
A0A3P9KCY3	1.4e-39	36.78	Uncharacterized protein OS=Oryzias latipes OX=8090 PE=4 SV=1	[more]
A0A2A4JID5	3.9e-34	48.94	Uncharacterized protein OS=Heliothis virescens OX=7102 GN=B5V51_1814 PE=4 SV=1	[more]
A0A662YYC1	5.1e-34	47.11	Uncharacterized protein OS=Acipenser ruthenus OX=7906 GN=EOD39_5459 PE=4 SV=1	[more]
A0A401TLU7	8.7e-34	40.89	Uncharacterized protein (Fragment) OS=Chiloscyllium punctatum OX=137246 GN=chiPu...	[more]

BLAST of CSPI04G08460 vs. NCBI nr


Match Name	E-value	Identity	Description
GCC42153.1	8.9e-41	45.59	hypothetical protein [Chiloscyllium punctatum]	[more]
PCG71468.1	8.1e-34	48.94	hypothetical protein B5V51_1814 [Heliothis virescens]	[more]
RXN01721.1	1.1e-33	47.11	hypothetical protein EOD39_5459 [Acipenser ruthenus]	[more]
GCC43617.1	1.8e-33	40.89	hypothetical protein [Chiloscyllium punctatum]	[more]
GCB69643.1	1.8e-33	41.51	hypothetical protein [Scyliorhinus torazame]	[more]

BLAST of CSPI04G08460 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.160.10.10	Hexapeptide repeat proteins	coord: 168..270 e-value: 1.0E-8 score: 37.0
None	No IPR available	GENE3D	2.160.10.10	Hexapeptide repeat proteins	coord: 1..167 e-value: 2.8E-14 score: 54.8
None	No IPR available	PANTHER	PTHR23304	SPOT2-RELATED	coord: 114..261 coord: 6..151
None	No IPR available	PANTHER	PTHR23304:SF170	SUBFAMILY NOT NAMED	coord: 6..151
None	No IPR available	PANTHER	PTHR23304:SF170	SUBFAMILY NOT NAMED	coord: 114..261
IPR011004	Trimeric LpxA-like superfamily	SUPERFAMILY	51161	Trimeric LpxA-like enzymes	coord: 60..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G08460.1	CSPI04G08460.1	mRNA