CSPI04G08450 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGTCATCTTATTAATTTAAAGTTCACACTGCAGGCCGTTGACACAGTTGTGGCTGGAATTCTCCATGACATAGTTGATGATACATGTCAAAAGTTGCACAGCATAGAAGAAGAATTTGGTGATGAAGTAGCCAAGTTGGTGGCTGGTGTCTCTAGGTTAAGTTACATAAACCAGGTATTATTAAAAAAATATATTTAGATTAAAACCCATCATTAAATCTCTTATCCCTCCCCCATGGAAAAAAACCATTATTAAAGTTAGGTTATGCTTTTGAATATTAAGAGCATGGTGTTTTTTGTTTGTGGTATTTCTCATGAGTGGGGATCTTAAATATTAGAAGGTAAGAACTTAAGATATCCTGGATGTGTGATAAGTTGAAGCCACTAAGAATATGATAAGCGTATAAAGTTTTTAAATTTATAGGAGTACAACCTGGACGACCTTTATCTTGGCTTTTCTATTCTTCTTCATGGTTTCTTTTACCCTGTCATAATATTGTTTTGATATTACATCTGTGTCATGCCTCAATTTTCCCCCATAAATTGTGATATTCTTAATGCTCCTTTTGGAATATAGTCATCAATATCAATTTATACAATTGTAATCACAGTGTAGTGAAAGACCCACTGCTCTCTACACCTATCTTAGTGAGGCTGCTTGAGACATGTGCCTCAGCGCATGTGCTGCACTGCTCCTAGAGCCCCAAGCCTTCTATTTATTTATAATTTTTCTAATTATTAAGGAATAAATGCATGAAACTTTTTAAAGCAGAAAATATGGTTGGTAAACTTTTTTTGAAAAGGAAACAAGCTTCAATATTATTAATAAACACAAAGTACAAGAGAGTTATACATTGAGAATGACAGAGAAGCCTAGAAATAGGGAAGAGAGAGAGGATCAGTAGGTGCACCTGGACATCTCAACTAGATTGACACCCCCTTAGCACTAAACTAAGAAAGAATATACTTTAACCTGCACTGACCATTGATGATGTGGTCTCCCTCTTTTCACCCTAAAGCAAGAAGATACCTTTGTTTGAATGTTAAAGGTGTCTTTTCTCATACCTTTGATATTTCTACACACACTGAAGATTTATGTCTAAGAATGATGGTTCTGACTGTCTTGGCATTGTGGCAGGAACCAGAAAGTATCCTCCCCCTAATAGAAACAGTGCCAGTGAATGAACATTTCTGATCAATATGGGTCTTCAATTGCGTCTCTCAGAGTCTTGAACCCCAAACTCTTCTAGAACTAATTTTCTCCGTTTCATGGCCTCTTTCCTTTCTCCAATTTCTTCAAGCTGAGAAACACCTTGGGCTGCTTCAGAAAACCCTTCTCCATCTGTTTTGCCATGATTAGGGATTTGAAGACCGATAGAAGCGACCTTAGAGTCTGATACAAAGGAAAAACTCTAGAGGCAGCAGAGGAATAAATGCATGAATGTTGTTTACATTTTCTCTATTGCGCTCTTCACTGAAAGAGCTTGTGTTTTTCATTTGTTTGTTCTTTAGGCCATGGAGGGCTGGTGCGTTAGTGCACCTCTAGTTTTAAACAACACTATGTAACCATATTATATACTTTCTGCAGTTGCTGCGCAGACATCGCCGAGTTAACTTGAACCCAGGTTCCTTAGGGCATGAAGAGGTATTG ATGTCTCGTCATCTTATTAATTTAAAGTTCACACTGCAGGCCGTTGACACAGTTGTGGCTGGAATTCTCCATGACATAGTTGATGATACATGTCAAAAGTTGCACAGCATAGAAGAAGAATTTGGTGATGAAGTAGCCAAGTTGGTGGCTGGTGTCTCTAGGTTAAGTTACATAAACCAGTTGCTGCGCAGACATCGCCGAGTTAACTTGAACCCAGGTTCCTTAGGGCATGAAGAGGTATTG ATGTCTCGTCATCTTATTAATTTAAAGTTCACACTGCAGGCCGTTGACACAGTTGTGGCTGGAATTCTCCATGACATAGTTGATGATACATGTCAAAAGTTGCACAGCATAGAAGAAGAATTTGGTGATGAAGTAGCCAAGTTGGTGGCTGGTGTCTCTAGGTTAAGTTACATAAACCAGTTGCTGCGCAGACATCGCCGAGTTAACTTGAACCCAGGTTCCTTAGGGCATGAAGAGGTATTG MSRHLINLKFTLQAVDTVVAGILHDIVDDTCQKLHSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRVNLNPGSLGHEEVL Homology
BLAST of CSPI04G08450 vs. ExPASy Swiss-Prot
Match: Q49640 (Probable GTP pyrophosphokinase OS=Mycobacterium leprae (strain TN) OX=272631 GN=relA PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 3.1e-05 Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy Swiss-Prot
Match: O34098 (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Spiroplasma citri OX=2133 GN=spoT PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 9.1e-05 Identity = 19/41 (46.34%), Postives = 31/41 (75.61%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy Swiss-Prot
Match: P66015 (Probable GTP pyrophosphokinase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=relA PE=3 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-04 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy Swiss-Prot
Match: P9WHG8 (Bifunctional (p)ppGpp synthase/hydrolase RelA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=relA PE=3 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-04 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy Swiss-Prot
Match: P9WHG9 (Bifunctional (p)ppGpp synthase/hydrolase RelA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=relA PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-04 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy TrEMBL
Match: A0A0A0KVK1 (GTP diphosphokinase OS=Cucumis sativus OX=3659 GN=Csa_4G092450 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.1e-36 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy TrEMBL
Match: A0A1S4E3Y5 (GTP diphosphokinase OS=Cucumis melo OX=3656 GN=LOC103501185 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.1e-28 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy TrEMBL
Match: A0A1S3CI10 (GTP diphosphokinase OS=Cucumis melo OX=3656 GN=LOC103501185 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.1e-28 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy TrEMBL
Match: A0A6J1CGS2 (GTP diphosphokinase OS=Momordica charantia OX=3673 GN=LOC111011522 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.7e-27 Identity = 65/75 (86.67%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of CSPI04G08450 vs. ExPASy TrEMBL
Match: A0A6J1CIN2 (GTP diphosphokinase OS=Momordica charantia OX=3673 GN=LOC111011522 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.8e-27 Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of CSPI04G08450 vs. NCBI nr
Match: XP_011653335.1 (uncharacterized protein LOC101208449 [Cucumis sativus] >XP_011653336.1 uncharacterized protein LOC101208449 [Cucumis sativus] >KGN53638.2 hypothetical protein Csa_014497 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 3.3e-28 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CSPI04G08450 vs. NCBI nr
Match: XP_008462918.1 (PREDICTED: uncharacterized protein LOC103501185 isoform X1 [Cucumis melo] >XP_016902945.1 PREDICTED: uncharacterized protein LOC103501185 isoform X1 [Cucumis melo] >XP_016902946.1 PREDICTED: uncharacterized protein LOC103501185 isoform X1 [Cucumis melo]) HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G08450 vs. NCBI nr
Match: XP_008462920.1 (PREDICTED: uncharacterized protein LOC103501185 isoform X3 [Cucumis melo]) HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G08450 vs. NCBI nr
Match: XP_022141015.1 (uncharacterized protein LOC111011522 isoform X4 [Momordica charantia]) HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26 Identity = 65/75 (86.67%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of CSPI04G08450 vs. NCBI nr
Match: XP_022141014.1 (uncharacterized protein LOC111011522 isoform X3 [Momordica charantia]) HSP 1 Score: 129.0 bits (323), Expect = 1.8e-26 Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of CSPI04G08450 vs. TAIR 10
Match: AT1G54130.1 (RELA/SPOT homolog 3 ) HSP 1 Score: 45.8 bits (107), Expect = 1.9e-05 Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
BLAST of CSPI04G08450 vs. TAIR 10
Match: AT3G14050.1 (RELA/SPOT homolog 2 ) HSP 1 Score: 45.4 bits (106), Expect = 2.5e-05 Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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