CSPI04G08300 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G08300
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	GTP-binding protein At3g49725, chloroplastic
Location	Chr4: 6034244 .. 6035649 (-)
RNA-Seq Expression	CSPI04G08300
Synteny	CSPI04G08300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGTAATTAATTTGAGGATTAAATCCCTTTTCAGTTAAATATCCTCTCGGGTAAAGGGTTAAGTAGTTGTATGTTTTGTTTTTCTATTAGTTACTCTGTTTTTTACAGCAAGTTACTTTTTCAGTTTTTAGTTACTTAAGTTGATTTAGTTAGTTGGTTGCTTGGTTTCAATCTTTCAAATGCTGGTTTGTAGCCTTTAAATAAGGTTCTGGTTCCCTAGGTTGTTGGACACATTAATTATAGTAGTAAAAGAGTTCTTCAAGATTGTGTTAAAAAAAATTAGCTTTTATGCTAATTTAATTTAATAGTGTATGCCTTACTAATATTGTAACGAAACTCTTATTTAGTGTAAAATTCAATTTCGAAGTAGACGTCTAGGATCTTCAATGAGACGTGAATGTTTTTGTCCTGATTGTTGCAGCATGTGGTGGATTGCACTGCTCCCAACCTTGATGAGCACCGATCAACTGTTTTTCAAGTACTTCAGCAAATAGGAGTTTCTAAAATGAAGCTTCAAGATATGATTGAGGTTTGGAACAAGGTAATTCTATTTACTTATTTCTTCTCCACAAGTAGGAAAATATTTGCAATTTTCTCCATAATGTATGATGCGTGAAATAATTTGGACAGATTGATTATCACCAAGAAGGCGAAAGTATAGATGACTCTTGTGATGATGATAATGGTGAGGCTGCTAAATCGTCAGGAGAAGATAGTATAGAAGGAAAGCTGTCATCTGCTGGAACTAACAATATTGTTGAAATGGAAAAGGGTGATATTACAATAAAGCAAGCAACTGAAGAACATCTTGGAAATAAGATGGAGGGACAAGAGAGTGATTGTTGTGATGACTGGTTGCAAGATGATGATGAGGATCAAAACCCTTGGGCTGATAAAGGCCAGGGAATGGGAGAAGATGTACAGGCTTCATTAGATCAATCTGGTCCACATGTCAGAATATCAGCTAGGTTAGGGGTTGGTTTGGGAGAGTTACTACAACTCATAGATAACAAACTGAAGGTTCAGGATGAGAAACTGCAAGCTCAAAACGTTTTAGAGAGGAATGTTTTTGATCGTAAATGGAGGCCATCTCAGATGGAGTCTGATTAATTTTGAGAAGATTATGATTCCTTGCATCTGCAATGGCTGCAGGCAAGTGTGTGGCTATCATATCTATGAAGCACTGAATATTATTTAGTATTCATGCATGTCTTGCCTCCTTTGCTTACATTTTCAGCATACGTTAAATCTTTTTTCTTTTTAGGAAAACGTTGTACTGATTATCAAGTGTGCAACTTCTGGTCCTGTACAGATAAATGGTCCTGGGATGTAATAATAACAATAATAAGCCTTTTGCCTTCTTTTAGTTTTCACAAATGTTGATGGTGATACAACTTACCACTCC

mRNA sequence

GATGTAATTAATTTGAGGATTAAATCCCTTTTCAGTTAAATATCCTCTCGGCATGTGGTGGATTGCACTGCTCCCAACCTTGATGAGCACCGATCAACTGTTTTTCAAGTACTTCAGCAAATAGGAGTTTCTAAAATGAAGCTTCAAGATATGATTGAGGTTTGGAACAAGATTGATTATCACCAAGAAGGCGAAAGTATAGATGACTCTTGTGATGATGATAATGGTGAGGCTGCTAAATCGTCAGGAGAAGATAGTATAGAAGGAAAGCTGTCATCTGCTGGAACTAACAATATTGTTGAAATGGAAAAGGGTGATATTACAATAAAGCAAGCAACTGAAGAACATCTTGGAAATAAGATGGAGGGACAAGAGAGTGATTGTTGTGATGACTGGTTGCAAGATGATGATGAGGATCAAAACCCTTGGGCTGATAAAGGCCAGGGAATGGGAGAAGATGTACAGGCTTCATTAGATCAATCTGGTCCACATGTCAGAATATCAGCTAGGTTAGGGGTTGGTTTGGGAGAGTTACTACAACTCATAGATAACAAACTGAAGGTTCAGGATGAGAAACTGCAAGCTCAAAACGTTTTAGAGAGGAATGTTTTTGATCGTAAATGGAGGCCATCTCAGATGGAGTCTGATTAATTTTGAGAAGATTATGATTCCTTGCATCTGCAATGGCTGCAGGCAAGTGTGTGGCTATCATATCTATGAAGCACTGAATATTATTTAGTATTCATGCATGTCTTGCCTCCTTTGCTTACATTTTCAGCATACGTTAAATCTTTTTTCTTTTTAGGAAAACGTTGTACTGATTATCAAGTGTGCAACTTCTGGTCCTGTACAGATAAATGGTCCTGGGATGTAATAATAACAATAATAAGCCTTTTGCCTTCTTTTAGTTTTCACAAATGTTGATGGTGATACAACTTACCACTCC

Coding sequence (CDS)

ATGAAGCTTCAAGATATGATTGAGGTTTGGAACAAGATTGATTATCACCAAGAAGGCGAAAGTATAGATGACTCTTGTGATGATGATAATGGTGAGGCTGCTAAATCGTCAGGAGAAGATAGTATAGAAGGAAAGCTGTCATCTGCTGGAACTAACAATATTGTTGAAATGGAAAAGGGTGATATTACAATAAAGCAAGCAACTGAAGAACATCTTGGAAATAAGATGGAGGGACAAGAGAGTGATTGTTGTGATGACTGGTTGCAAGATGATGATGAGGATCAAAACCCTTGGGCTGATAAAGGCCAGGGAATGGGAGAAGATGTACAGGCTTCATTAGATCAATCTGGTCCACATGTCAGAATATCAGCTAGGTTAGGGGTTGGTTTGGGAGAGTTACTACAACTCATAGATAACAAACTGAAGGTTCAGGATGAGAAACTGCAAGCTCAAAACGTTTTAGAGAGGAATGTTTTTGATCGTAAATGGAGGCCATCTCAGATGGAGTCTGATTAA

Protein sequence

MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD*

Homology

[Close]

BLAST of CSPI04G08300 vs. ExPASy Swiss-Prot
Match: Q0WTB4 (GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g49725 PE=2 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 9.6e-12
Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = 0


Query: 2   KLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGD 61
           KLQ+MIEVWNKIDY  E + +++    D+GE      ED  + K                
Sbjct: 459 KLQNMIEVWNKIDY--EEDEVEEEKYLDDGEGVGEEDEDEADLKAEET------------ 518

Query: 62  ITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLD---QSGP 121
           +   +AT +   ++++  + D  D WL  +DE+    AD  +       A +D   + GP
Sbjct: 519 VDASEATVDE--DQIQNGDGDDADGWLLSEDEN----ADDPEFWKVPEVAKVDAANKKGP 578

Query: 122 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERN-VFDRKWRPSQMESD 172
            VR+SA  GVGL ELL LID+K+K  ++KL++  ++ER+ +  RKWRP + + +
Sbjct: 579 DVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELHKRKWRPPRNDDE 610

[Close]

BLAST of CSPI04G08300 vs. ExPASy TrEMBL
Match: A0A0A0KZ07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090310 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.0e-88
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDM+EVWNKIDYHQEGESIDDSCDDDNGEAA SSGEDS EGKLSSAGTNNIVEMEKG
Sbjct: 31  MKLQDMVEVWNKIDYHQEGESIDDSCDDDNGEAANSSGEDSNEGKLSSAGTNNIVEMEKG 90

Query: 61  DITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHV 120
           DITIKQATEEHLGN+MEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHV
Sbjct: 91  DITIKQATEEHLGNRMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHV 150

Query: 121 RISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           RISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
Sbjct: 151 RISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 201

[Close]

BLAST of CSPI04G08300 vs. ExPASy TrEMBL
Match: A0A5D3C2J4 (GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00250 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.3e-83
Identity = 159/173 (91.91%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKG
Sbjct: 424 MKLQDMIEVWNKIDYHEEGKSIDESCDDDNGEAANSSGEDSIEGKLSSAGTNNIIEMEKG 483

Query: 61  DITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGP 120
           DITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPWADKG+G+GEDVQASLDQSGP
Sbjct: 484 DITIKQATEEDLGNGNRMEGQESDCCDDWLEDDDEDKNPWADKGKGIGEDVQASLDQSGP 543

Query: 121 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Sbjct: 544 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMEAD 596

[Close]

BLAST of CSPI04G08300 vs. ExPASy TrEMBL
Match: A0A1S3CJK3 (GTP-binding protein At3g49725, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501174 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.3e-83
Identity = 159/173 (91.91%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKG
Sbjct: 405 MKLQDMIEVWNKIDYHEEGKSIDESCDDDNGEAANSSGEDSIEGKLSSAGTNNIIEMEKG 464

Query: 61  DITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGP 120
           DITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPWADKG+G+GEDVQASLDQSGP
Sbjct: 465 DITIKQATEEDLGNGNRMEGQESDCCDDWLEDDDEDKNPWADKGKGIGEDVQASLDQSGP 524

Query: 121 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Sbjct: 525 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMEAD 577

[Close]

BLAST of CSPI04G08300 vs. ExPASy TrEMBL
Match: A0A1S3CIG8 (GTP-binding protein At3g49725, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501174 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.3e-83
Identity = 159/173 (91.91%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKG
Sbjct: 424 MKLQDMIEVWNKIDYHEEGKSIDESCDDDNGEAANSSGEDSIEGKLSSAGTNNIIEMEKG 483

Query: 61  DITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGP 120
           DITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPWADKG+G+GEDVQASLDQSGP
Sbjct: 484 DITIKQATEEDLGNGNRMEGQESDCCDDWLEDDDEDKNPWADKGKGIGEDVQASLDQSGP 543

Query: 121 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Sbjct: 544 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMEAD 596

[Close]

BLAST of CSPI04G08300 vs. ExPASy TrEMBL
Match: A0A5A7UNJ1 (GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001900 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.3e-82
Identity = 157/173 (90.75%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDMIEVWNKIDYH+EG+ ID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKG
Sbjct: 205 MKLQDMIEVWNKIDYHEEGKGIDESCDDDNGEAANSSGEDSIEGKLSSAGTNNIIEMEKG 264

Query: 61  DITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGP 120
           DITI+QATEE L  GN+MEGQESDCCDDWL+DDDED+NPWADKG+G+GEDVQASLDQSGP
Sbjct: 265 DITIEQATEEDLGNGNRMEGQESDCCDDWLEDDDEDKNPWADKGKGIGEDVQASLDQSGP 324

Query: 121 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Sbjct: 325 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMEAD 377

[Close]

BLAST of CSPI04G08300 vs. NCBI nr
Match: XP_004137207.1 (GTP-binding protein At3g49725, chloroplastic [Cucumis sativus] >KAE8649266.1 hypothetical protein Csa_014691 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 1.0e-87
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDM+EVWNKIDYHQEGESIDDSCDDDNGEAA SSGEDS EGKLSSAGTNNIVEMEKG
Sbjct: 423 MKLQDMVEVWNKIDYHQEGESIDDSCDDDNGEAANSSGEDSNEGKLSSAGTNNIVEMEKG 482

Query: 61  DITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHV 120
           DITIKQATEEHLGN+MEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHV
Sbjct: 483 DITIKQATEEHLGNRMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHV 542

Query: 121 RISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           RISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
Sbjct: 543 RISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 593

[Close]

BLAST of CSPI04G08300 vs. NCBI nr
Match: XP_008462905.1 (PREDICTED: GTP-binding protein At3g49725, chloroplastic isoform X1 [Cucumis melo] >TYK04619.1 GTP-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 159/173 (91.91%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKG
Sbjct: 424 MKLQDMIEVWNKIDYHEEGKSIDESCDDDNGEAANSSGEDSIEGKLSSAGTNNIIEMEKG 483

Query: 61  DITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGP 120
           DITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPWADKG+G+GEDVQASLDQSGP
Sbjct: 484 DITIKQATEEDLGNGNRMEGQESDCCDDWLEDDDEDKNPWADKGKGIGEDVQASLDQSGP 543

Query: 121 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Sbjct: 544 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMEAD 596

[Close]

BLAST of CSPI04G08300 vs. NCBI nr
Match: XP_008462906.1 (PREDICTED: GTP-binding protein At3g49725, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 159/173 (91.91%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKG
Sbjct: 405 MKLQDMIEVWNKIDYHEEGKSIDESCDDDNGEAANSSGEDSIEGKLSSAGTNNIIEMEKG 464

Query: 61  DITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGP 120
           DITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPWADKG+G+GEDVQASLDQSGP
Sbjct: 465 DITIKQATEEDLGNGNRMEGQESDCCDDWLEDDDEDKNPWADKGKGIGEDVQASLDQSGP 524

Query: 121 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Sbjct: 525 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMEAD 577

[Close]

BLAST of CSPI04G08300 vs. NCBI nr
Match: KAA0056658.1 (GTP-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 157/173 (90.75%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKG 60
           MKLQDMIEVWNKIDYH+EG+ ID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKG
Sbjct: 205 MKLQDMIEVWNKIDYHEEGKGIDESCDDDNGEAANSSGEDSIEGKLSSAGTNNIIEMEKG 264

Query: 61  DITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGP 120
           DITI+QATEE L  GN+MEGQESDCCDDWL+DDDED+NPWADKG+G+GEDVQASLDQSGP
Sbjct: 265 DITIEQATEEDLGNGNRMEGQESDCCDDWLEDDDEDKNPWADKGKGIGEDVQASLDQSGP 324

Query: 121 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Sbjct: 325 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMEAD 377

[Close]

BLAST of CSPI04G08300 vs. NCBI nr
Match: XP_038892869.1 (GTP-binding protein At3g49725, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 271.9 bits (694), Expect = 3.7e-69
Identity = 142/180 (78.89%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSS----AGTNNIVE 60
           MKL+DMIEVWNKIDYH+EG+SID+SCDDDNG+A  SSGEDSI GKLSS    AGTNN +E
Sbjct: 416 MKLEDMIEVWNKIDYHEEGKSIDESCDDDNGKAGNSSGEDSIGGKLSSVLDDAGTNNFIE 475

Query: 61  MEKGDITIKQATE----EHLGNKMEGQESDCCDDWL-QDDDEDQNPWADKGQGMGEDVQA 120
           +EKGDIT KQATE    E+ GN+MEGQESDCC+DWL  DDD++QNPW D+GQ MGEDVQA
Sbjct: 476 LEKGDITKKQATEVISQENFGNRMEGQESDCCEDWLADDDDQNQNPWIDEGQRMGEDVQA 535

Query: 121 SLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD 172
           S DQSGPHVRISA LGVGL ELLQLIDNKLKVQDEKL+AQNVLERNVF+RKWRPSQ+E+D
Sbjct: 536 SGDQSGPHVRISATLGVGLRELLQLIDNKLKVQDEKLKAQNVLERNVFERKWRPSQIEAD 595

[Close]

BLAST of CSPI04G08300 vs. TAIR 10
Match: AT3G49725.1 (GTP-binding protein, HflX )

HSP 1 Score: 71.6 bits (174), Expect = 6.8e-13
Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = 0


Query: 2   KLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGD 61
           KLQ+MIEVWNKIDY  E + +++    D+GE      ED  + K                
Sbjct: 459 KLQNMIEVWNKIDY--EEDEVEEEKYLDDGEGVGEEDEDEADLKAEET------------ 518

Query: 62  ITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQASLD---QSGP 121
           +   +AT +   ++++  + D  D WL  +DE+    AD  +       A +D   + GP
Sbjct: 519 VDASEATVDE--DQIQNGDGDDADGWLLSEDEN----ADDPEFWKVPEVAKVDAANKKGP 578

Query: 122 HVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERN-VFDRKWRPSQMESD 172
            VR+SA  GVGL ELL LID+K+K  ++KL++  ++ER+ +  RKWRP + + +
Sbjct: 579 DVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELHKRKWRPPRNDDE 610

The following BLAST results are available for this feature:

BLAST of CSPI04G08300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WTB4	9.6e-12	33.91	GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CSPI04G08300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ07	5.0e-88	97.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090310 PE=4 SV=1	[more]
A0A5D3C2J4	6.3e-83	91.91	GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G...	[more]
A0A1S3CJK3	6.3e-83	91.91	GTP-binding protein At3g49725, chloroplastic isoform X2 OS=Cucumis melo OX=3656 ...	[more]
A0A1S3CIG8	6.3e-83	91.91	GTP-binding protein At3g49725, chloroplastic isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A5A7UNJ1	5.3e-82	90.75	GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G...	[more]

BLAST of CSPI04G08300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137207.1	1.0e-87	97.66	GTP-binding protein At3g49725, chloroplastic [Cucumis sativus] >KAE8649266.1 hyp...	[more]
XP_008462905.1	1.3e-82	91.91	PREDICTED: GTP-binding protein At3g49725, chloroplastic isoform X1 [Cucumis melo...	[more]
XP_008462906.1	1.3e-82	91.91	PREDICTED: GTP-binding protein At3g49725, chloroplastic isoform X2 [Cucumis melo...	[more]
KAA0056658.1	1.1e-81	90.75	GTP-binding protein [Cucumis melo var. makuwa]	[more]
XP_038892869.1	3.7e-69	78.89	GTP-binding protein At3g49725, chloroplastic isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI04G08300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49725.1	6.8e-13	33.91	GTP-binding protein, HflX	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..116
None	No IPR available	PANTHER	PTHR10229:SF6	OS03G0727900 PROTEIN	coord: 2..168
IPR016496	GTPase HflX	PANTHER	PTHR10229	GTP-BINDING PROTEIN HFLX	coord: 2..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G08300.1	CSPI04G08300.1	mRNA
CSPI04G08300.2	CSPI04G08300.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0046872	metal ion binding