CSPI04G08250 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G08250
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Homeobox leucine zipper protein
Location	Chr4: 5987775 .. 5988862 (-)
RNA-Seq Expression	CSPI04G08250
Synteny	CSPI04G08250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAAAGGAGGTTTAGTGATGAACAAATTAAAACACTGGAGGCAATATATTATTTGACTGAATCGAAGTTGAATTCGAGGCAGGTGATCAAGCTAGCAACTAAGTTGGGACTGCAACCTCAACAGATTACTATATGGTTTCAGAACAAAAGAGCAAGATGGAAGTCCAAAGAGAAGCAGGAGAATTTCAAAAGCCTAAGAGCCAAGTGTGATGATCTAGCATCTCAGTTTGAAACGTTACAGGAAGAGAACAACTCCTTGCGCTCACAGGTACCAAAACTCTTCTTCATTTTCCTTTATTCGTCCTTATGTAGCCAAGCATTTTCATTAGTTGCAATAGGCATTTGAAACAGTTGCAGAAGCTAACCGTTCTTCAAGGACCTTGTGAGGGCACTATCATTCGAATGACATTGAAAAAAACAACTCATGAAACTCATGAAAAGCCAAAAAACTTACCAGATGCATTGGAACAGATGTATTCGAACAATAACTATAACACAAAATGTTTAGTGATTGGAGAAGGTGAACTTCAAATGACCCATTTGTTGGAAGGCAGAAGCGACCGCATTATGCCACATTGAGAAGCAACTTTTGAACCCAAATGGATCCTTTGAAACATCTGACACATGGTGCATTTTTTATGCCGATGGTGGTGTCTATGAATATCAGTCGTGTAGCAGTTTGCAGGGACAGAGTTTCTGGGGATAAAGAAAGATAAGATGGCCCATAATTTCATGACTTATTACTACCAGCTGAAAAATTGCCATTTAGACAACAGATATGAACAAAACTGAGGAACTGCCAACTGCTGCTAGCTGTTTTAGCAAGTACATTCCTTCCTTATCTTTGTGCAATTTACGAAAAGAAGAGACATTGGAACTGTATTACTTTGAAATGCATTAGTAGCATCCAAGAAGTAACGCAGACAGCTCAATCAATCGACCTTTTTAGGTGATGCACACACAATTGCTGAACTTCATTTCTTTTCTGGGGGGGCCTCTTGTTATGACTTCTGAGCAACATCTGTTAACTAAGATCAGTAGTTGATCAACAAGTTAAAAAAAAGTATATTTTATATGATCTTT

mRNA sequence

ATGAACAAAAGGAGGTTTAGTGATGAACAAATTAAAACACTGGAGGCAATATATTATTTGACTGAATCGAAGTTGAATTCGAGGCAGGTGATCAAGCTAGCAACTAAGTTGGGACTGCAACCTCAACAGATTACTATATGGTTTCAGAACAAAAGAGCAAGATGGAAGTCCAAAGAGAAGCAGGAGAATTTCAAAAGCCTAAGAGCCAAGTGTGATGATCTAGCATCTCAGTTTGAAACGTTACAGGAAGAGAACAACTCCTTGCGCTCACAGTTGCAGAAGCTAACCGTTCTTCAAGGACCTTGTGAGGGCACTATCATTCGAATGACATTGAAAAAAACAACTCATGAAACTCATGAAAAGCCAAAAAACTTACCAGATGCATTGGAACAGATGTATTCGAACAATAACTATAACACAAAATGTTTAGTGATTGGAGAAGGTGAACTTCAAATGACCCATTTGTTGGAAGGCAGAAGCGACCGCATTATGCCACATTGAGAAGCAACTTTTGAACCCAAATGGATCCTTTGAAACATCTGACACATGGTGCATTTTTTATGCCGATGGTGGTGTCTATGAATATCAGTCGTGTAGCAGTTTGCAGGGACAGAGTTTCTGGGGATAAAGAAAGATAAGATGGCCCATAATTTCATGACTTATTACTACCAGCTGAAAAATTGCCATTTAGACAACAGATATGAACAAAACTGAGGAACTGCCAACTGCTGCTAGCTGTTTTAGCAAGTACATTCCTTCCTTATCTTTGTGCAATTTACGAAAAGAAGAGACATTGGAACTGTATTACTTTGAAATGCATTAGTAGCATCCAAGAAGTAACGCAGACAGCTCAATCAATCGACCTTTTTAGGTGATGCACACACAATTGCTGAACTTCATTTCTTTTCTGGGGGGGCCTCTTGTTATGACTTCTGAGCAACATCTGTTAACTAAGATCAGTAGTTGATCAACAAGTTAAAAAAAAGTATATTTTATATGATCTTT

Coding sequence (CDS)

ATGAACAAAAGGAGGTTTAGTGATGAACAAATTAAAACACTGGAGGCAATATATTATTTGACTGAATCGAAGTTGAATTCGAGGCAGGTGATCAAGCTAGCAACTAAGTTGGGACTGCAACCTCAACAGATTACTATATGGTTTCAGAACAAAAGAGCAAGATGGAAGTCCAAAGAGAAGCAGGAGAATTTCAAAAGCCTAAGAGCCAAGTGTGATGATCTAGCATCTCAGTTTGAAACGTTACAGGAAGAGAACAACTCCTTGCGCTCACAGTTGCAGAAGCTAACCGTTCTTCAAGGACCTTGTGAGGGCACTATCATTCGAATGACATTGAAAAAAACAACTCATGAAACTCATGAAAAGCCAAAAAACTTACCAGATGCATTGGAACAGATGTATTCGAACAATAACTATAACACAAAATGTTTAGTGATTGGAGAAGGTGAACTTCAAATGACCCATTTGTTGGAAGGCAGAAGCGACCGCATTATGCCACATTGA

Protein sequence

MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQGPCEGTIIRMTLKKTTHETHEKPKNLPDALEQMYSNNNYNTKCLVIGEGELQMTHLLEGRSDRIMPH*

Homology

[Close]

BLAST of CSPI04G08250 vs. ExPASy Swiss-Prot
Match: P46897 (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana OX=3702 GN=ATHB-7 PE=1 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-22
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 0


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N+RRFSDEQIK+LE ++  +E++L  R+ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ +
Sbjct: 32  NQRRFSDEQIKSLEMMFE-SETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--------QGPCEGTIIRMTLKK 121
             +  LR   D+LASQFE+L++E  +L S+LQ+L           +  C G    + L  
Sbjct: 92  TEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSS 151

Query: 122 TTHET------HEKPKNLPDALEQMYSNNNYNTKC 143
           T HE+        KP+ +   +E      ++   C
Sbjct: 152 THHESENEENRRRKPEEVRPEMEMKDDKGHHGVMC 185

[Close]

BLAST of CSPI04G08250 vs. ExPASy Swiss-Prot
Match: Q9M276 (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana OX=3702 GN=ATHB-12 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-20
Identity = 57/147 (38.78%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N++RFS+EQIK+LE I+  +E++L  R+ +++A +LGLQP+Q+ IWFQNKRARWK+K+ +
Sbjct: 30  NQKRFSEEQIKSLELIFE-SETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLE 89

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGP--------CEGTIIRMTLK 121
           + + +LRA  ++LASQFE +++E  SL S+LQ+L   +Q P        C    + ++  
Sbjct: 90  KEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLALSSS 149

Query: 122 KTTHETHEKPKNLPDALEQMYSNNNYN 140
             +H    +P+   D    + ++ +YN
Sbjct: 150 TESHNGKSEPEGRLDQGSVLCNDGDYN 175

[Close]

BLAST of CSPI04G08250 vs. ExPASy Swiss-Prot
Match: Q9XH35 (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica OX=39946 GN=HOX6 PE=2 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.0e-18
Identity = 51/100 (51.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           K+RFS+EQIK+LE++ + T++KL  RQ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ + 
Sbjct: 31  KKRFSEEQIKSLESM-FATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 90

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGP 102
            + +LR   D L   +E+L++E  +L  QL+KL  +LQ P
Sbjct: 91  EYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQEP 129

[Close]

BLAST of CSPI04G08250 vs. ExPASy Swiss-Prot
Match: Q651Z5 (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX6 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.0e-18
Identity = 51/100 (51.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           K+RFS+EQIK+LE++ + T++KL  RQ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ + 
Sbjct: 31  KKRFSEEQIKSLESM-FATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 90

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGP 102
            + +LR   D L   +E+L++E  +L  QL+KL  +LQ P
Sbjct: 91  EYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQEP 129

[Close]

BLAST of CSPI04G08250 vs. ExPASy Swiss-Prot
Match: Q01IK0 (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica OX=39946 GN=HOX22 PE=2 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 3.9e-18
Identity = 45/93 (48.39%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           KRRF++EQI++LE++++   +KL  R+  +LA +LGLQP+Q+ IWFQNKRARW+SK+ + 
Sbjct: 74  KRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEH 133

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKL 96
           ++ +LR+K D L S+ E+L++E  +L  QL +L
Sbjct: 134 DYAALRSKYDALHSRVESLKQEKLALTVQLHEL 166

[Close]

BLAST of CSPI04G08250 vs. ExPASy TrEMBL
Match: A0A6J1E599 (homeobox-leucine zipper protein ATHB-12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430852 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 3.8e-40
Identity = 101/170 (59.41%), Postives = 129/170 (75.88%), Query Frame = 0


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRRFSDEQI++LE+I+Y ++SKL+SR+ ++LAT+LGLQP+QI IWFQN+RARWKSKE 
Sbjct: 40  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 99

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--QGPCEGTIIRMTLKKTTHET 120
           + NF+SLRA  D+LASQF+TLQEE NSL SQLQKL+ L  +GP EG      + +T +ET
Sbjct: 100 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKLSELVHEGPREGHYSN-EIAETIYET 159

Query: 121 HEKPKNLPDALEQ---MYSNNNYNT--KCLVIGEGE--LQMTHLLEGRSD 162
            EKP++  D L Q    Y NNNYNT  +    GEG+  L+MTH  EGRS+
Sbjct: 160 KEKPQSFHDELGQNGVTYLNNNYNTDKRGTENGEGDRGLEMTHSSEGRSN 208

[Close]

BLAST of CSPI04G08250 vs. ExPASy TrEMBL
Match: A0A6J1E8K2 (homeobox-leucine zipper protein ATHB-12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430852 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 3.8e-40
Identity = 101/170 (59.41%), Postives = 129/170 (75.88%), Query Frame = 0


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRRFSDEQI++LE+I+Y ++SKL+SR+ ++LAT+LGLQP+QI IWFQN+RARWKSKE 
Sbjct: 54  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 113

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--QGPCEGTIIRMTLKKTTHET 120
           + NF+SLRA  D+LASQF+TLQEE NSL SQLQKL+ L  +GP EG      + +T +ET
Sbjct: 114 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKLSELVHEGPREGHYSN-EIAETIYET 173

Query: 121 HEKPKNLPDALEQ---MYSNNNYNT--KCLVIGEGE--LQMTHLLEGRSD 162
            EKP++  D L Q    Y NNNYNT  +    GEG+  L+MTH  EGRS+
Sbjct: 174 KEKPQSFHDELGQNGVTYLNNNYNTDKRGTENGEGDRGLEMTHSSEGRSN 222

[Close]

BLAST of CSPI04G08250 vs. ExPASy TrEMBL
Match: A0A6J1J6P1 (homeobox-leucine zipper protein ATHB-12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483056 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 99/171 (57.89%), Postives = 127/171 (74.27%), Query Frame = 0


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           NKRRFSDEQI++LE+I+Y ++SKL+SR+ ++LAT+LGLQP+QI IWFQN+R RWKSKE +
Sbjct: 52  NKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWKSKEME 111

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT--VLQGPCEGTIIRMTLKKTTHETH 121
            NF+SLRA  D+LASQF+TLQEE NSL SQLQKL+  V +GP EG      + KT +ET 
Sbjct: 112 NNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKLSELVQEGPREGHYSN-EIAKTIYETK 171

Query: 122 EKPKNLPDALEQ---MYSNNNYNT--KCLVIGEGE--LQMTHLLEGRSDRI 164
           EKP++  D L Q    Y +NNYNT  +    GEG+  L+MTH  EG S+ I
Sbjct: 172 EKPQSFHDELGQSGVTYLSNNYNTDKRGTENGEGDRGLEMTHSSEGISNDI 221

[Close]

BLAST of CSPI04G08250 vs. ExPASy TrEMBL
Match: A0A6J1J3H1 (homeobox-leucine zipper protein ATHB-12-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483056 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 99/171 (57.89%), Postives = 127/171 (74.27%), Query Frame = 0


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           NKRRFSDEQI++LE+I+Y ++SKL+SR+ ++LAT+LGLQP+QI IWFQN+R RWKSKE +
Sbjct: 38  NKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWKSKEME 97

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT--VLQGPCEGTIIRMTLKKTTHETH 121
            NF+SLRA  D+LASQF+TLQEE NSL SQLQKL+  V +GP EG      + KT +ET 
Sbjct: 98  NNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKLSELVQEGPREGHYSN-EIAKTIYETK 157

Query: 122 EKPKNLPDALEQ---MYSNNNYNT--KCLVIGEGE--LQMTHLLEGRSDRI 164
           EKP++  D L Q    Y +NNYNT  +    GEG+  L+MTH  EG S+ I
Sbjct: 158 EKPQSFHDELGQSGVTYLSNNYNTDKRGTENGEGDRGLEMTHSSEGISNDI 207

[Close]

BLAST of CSPI04G08250 vs. ExPASy TrEMBL
Match: A0A6J1G2H1 (homeobox-leucine zipper protein ATHB-12-like OS=Cucurbita moschata OX=3662 GN=LOC111450049 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.1e-34
Identity = 93/166 (56.02%), Postives = 116/166 (69.88%), Query Frame = 0


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRRFSDEQI++LE+I+Y ++SKL+SR+ ++LA +LGLQP+QI+IWFQN+RARWKSK+ 
Sbjct: 36  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLAAELGLQPRQISIWFQNRRARWKSKQM 95

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKL--TVLQGPCEGTIIRMTLKKTTHET 120
           + +F+SLRA  D+LASQF TLQEENNSL SQLQKL   V + P EG        K   E 
Sbjct: 96  ENDFRSLRASYDNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEG-CYSTNFGKNADEN 155

Query: 121 HEKPKNLPDALEQ---MYSNNNYNTKCLVIGEGELQMTHLLEGRSD 162
             K + L D  EQ    Y NNN  T+      G  Q THLLEGRS+
Sbjct: 156 QAKLEILEDEPEQNGVTYLNNNSKTE----NGGGHQATHLLEGRSN 196

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: XP_004137302.1 (homeobox-leucine zipper protein ATHB-7-like [Cucumis sativus] >KAE8649264.1 hypothetical protein Csa_014399 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81
Identity = 158/163 (96.93%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK
Sbjct: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQGPCEGTIIRMTLKKTTHETHE 120
           QENFKSLRAKCDDLASQFETLQEENNSL SQLQKLTVLQGPCEG IIRMTLKKTTHETHE
Sbjct: 61  QENFKSLRAKCDDLASQFETLQEENNSLLSQLQKLTVLQGPCEGAIIRMTLKKTTHETHE 120

Query: 121 KPKNLPDALEQMYSNNNYNTKCLVIGEGELQMTHLLEGRSDRI 164
           KPK LP ALEQMYSN+NYNTKCLVIGEGELQMTHLLEGRSDRI
Sbjct: 121 KPKTLPHALEQMYSNDNYNTKCLVIGEGELQMTHLLEGRSDRI 163

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: KAG6576630.1 (Homeobox-leucine zipper protein ATHB-7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-40
Identity = 102/172 (59.30%), Postives = 130/172 (75.58%), Query Frame = 0


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRRFSDEQI++LE+I+Y ++SKL+SR+ ++LAT+LGLQP+QI IWFQN+RARWKSKE 
Sbjct: 104 MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 163

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--QGPCEGTIIRMTLKKTTHET 120
           + NF+SLRA  D+LASQF+TLQEE NSL SQLQKL+ L  +GP EG      + +T +ET
Sbjct: 164 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKLSELVHEGPREGHYSN-EIAETIYET 223

Query: 121 HEKPKNLPDALEQ---MYSNNNYNT--KCLVIGEGE--LQMTHLLEGRSDRI 164
            EKP++  D L Q    Y NNNYNT  +    GEG+  L+MTH  EGRS+ I
Sbjct: 224 KEKPQSFHDELGQSGVTYLNNNYNTDKRGTENGEGDRGLEMTHSSEGRSNDI 274

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: KAG7014681.1 (Homeobox-leucine zipper protein ATHB-7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-40
Identity = 102/172 (59.30%), Postives = 130/172 (75.58%), Query Frame = 0


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRRFSDEQI++LE+I+Y ++SKL+SR+ ++LAT+LGLQP+QI IWFQN+RARWKSKE 
Sbjct: 107 MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 166

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--QGPCEGTIIRMTLKKTTHET 120
           + NF+SLRA  D+LASQF+TLQEE NSL SQLQKL+ L  +GP EG      + +T +ET
Sbjct: 167 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKLSELVHEGPREGHYSN-EIAETIYET 226

Query: 121 HEKPKNLPDALEQ---MYSNNNYNT--KCLVIGEGE--LQMTHLLEGRSDRI 164
            EKP++  D L Q    Y NNNYNT  +    GEG+  L+MTH  EGRS+ I
Sbjct: 227 KEKPQSFHDELGQSGVTYLNNNYNTDKRGTENGEGDRGLEMTHSSEGRSNDI 277

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: XP_038900057.1 (homeobox-leucine zipper protein ATHB-12-like isoform X2 [Benincasa hispida])

HSP 1 Score: 174.9 bits (442), Expect = 5.9e-40
Identity = 95/155 (61.29%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRR SDEQI++LE I+Y T+S+L+SR+ ++LAT+LGLQP+QI IWFQN+RARWKSKE 
Sbjct: 59  MNKRRLSDEQIRSLETIFYSTDSRLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 118

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTV-LQGPCEGTIIRMTLKKTTHETH 120
           + NF+SL+A  D+L SQF+TLQEENNS+ SQLQKL V LQGPC G      + +TT ET 
Sbjct: 119 ENNFRSLKAIYDNLESQFKTLQEENNSMLSQLQKLNVLLQGPCVGNYSN-DISRTTRETQ 178

Query: 121 EKPKNLPDALE---QMYSNNNYNT--KCLVIGEGE 150
           E+PK+  D LE     Y NNNYNT  KC+  GEG+
Sbjct: 179 ERPKSFQDELELSVVTYMNNNYNTNKKCIANGEGK 212

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: XP_022923069.1 (homeobox-leucine zipper protein ATHB-12-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 174.5 bits (441), Expect = 7.8e-40
Identity = 101/170 (59.41%), Postives = 129/170 (75.88%), Query Frame = 0


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRRFSDEQI++LE+I+Y ++SKL+SR+ ++LAT+LGLQP+QI IWFQN+RARWKSKE 
Sbjct: 40  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 99

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--QGPCEGTIIRMTLKKTTHET 120
           + NF+SLRA  D+LASQF+TLQEE NSL SQLQKL+ L  +GP EG      + +T +ET
Sbjct: 100 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKLSELVHEGPREGHYSN-EIAETIYET 159

Query: 121 HEKPKNLPDALEQ---MYSNNNYNT--KCLVIGEGE--LQMTHLLEGRSD 162
            EKP++  D L Q    Y NNNYNT  +    GEG+  L+MTH  EGRS+
Sbjct: 160 KEKPQSFHDELGQNGVTYLNNNYNTDKRGTENGEGDRGLEMTHSSEGRSN 208

[Close]

BLAST of CSPI04G08250 vs. TAIR 10
Match: AT2G46680.1 (homeobox 7 )

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-23
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 0


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N+RRFSDEQIK+LE ++  +E++L  R+ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ +
Sbjct: 32  NQRRFSDEQIKSLEMMFE-SETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--------QGPCEGTIIRMTLKK 121
             +  LR   D+LASQFE+L++E  +L S+LQ+L           +  C G    + L  
Sbjct: 92  TEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSS 151

Query: 122 TTHET------HEKPKNLPDALEQMYSNNNYNTKC 143
           T HE+        KP+ +   +E      ++   C
Sbjct: 152 THHESENEENRRRKPEEVRPEMEMKDDKGHHGVMC 185

[Close]

BLAST of CSPI04G08250 vs. TAIR 10
Match: AT2G46680.2 (homeobox 7 )

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-21
Identity = 60/153 (39.22%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N+RRFSDEQIK+LE ++  +E++L  R+ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ +
Sbjct: 32  NQRRFSDEQIKSLEMMFE-SETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQ------LQKLTVLQGPCEGTIIRMTLKKTT 121
             +  LR   D+LASQFE+L++E  +L S+       +K    +  C G    + L  T 
Sbjct: 92  TEYNILRQNYDNLASQFESLKKEKQALVSERLKEATQKKTQEEERQCSGDQAVVALSSTH 151

Query: 122 HET------HEKPKNLPDALEQMYSNNNYNTKC 143
           HE+        KP+ +   +E      ++   C
Sbjct: 152 HESENEENRRRKPEEVRPEMEMKDDKGHHGVMC 183

[Close]

BLAST of CSPI04G08250 vs. TAIR 10
Match: AT3G61890.1 (homeobox 12 )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 57/147 (38.78%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N++RFS+EQIK+LE I+  +E++L  R+ +++A +LGLQP+Q+ IWFQNKRARWK+K+ +
Sbjct: 30  NQKRFSEEQIKSLELIFE-SETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLE 89

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGP--------CEGTIIRMTLK 121
           + + +LRA  ++LASQFE +++E  SL S+LQ+L   +Q P        C    + ++  
Sbjct: 90  KEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLALSSS 149

Query: 122 KTTHETHEKPKNLPDALEQMYSNNNYN 140
             +H    +P+   D    + ++ +YN
Sbjct: 150 TESHNGKSEPEGRLDQGSVLCNDGDYN 175

[Close]

BLAST of CSPI04G08250 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16
Identity = 44/99 (44.44%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           KRR S  Q+K LE  + L E+KL   + +KLA +LGLQP+Q+ +WFQN+RARWK+K+ ++
Sbjct: 63  KRRLSINQVKALEKNFEL-ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 122

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKL-TVLQG 101
           ++  L+ + D L   F++L+ +N SL  ++ KL T L G
Sbjct: 123 DYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNG 160

[Close]

BLAST of CSPI04G08250 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 81.3 bits (199), Expect = 8.3e-16
Identity = 44/102 (43.14%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           KRR + EQ+  LE  +  TE+KL   +  +LA KLGLQP+Q+ +WFQN+RARWK+K+ + 
Sbjct: 69  KRRLTTEQVHLLEKSFE-TENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 128

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGPCE 104
           ++  L++  D L S ++++  +N+ LRS++  LT  LQG  E
Sbjct: 129 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQE 169

The following BLAST results are available for this feature:

BLAST of CSPI04G08250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46897	5.8e-22	40.00	Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana OX=3702 GN=ATHB-7...	[more]
Q9M276	2.4e-20	38.78	Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9XH35	1.0e-18	51.00	Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q651Z5	1.0e-18	51.00	Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q01IK0	3.9e-18	48.39	Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of CSPI04G08250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E599	3.8e-40	59.41	homeobox-leucine zipper protein ATHB-12-like isoform X2 OS=Cucurbita moschata OX...	[more]
A0A6J1E8K2	3.8e-40	59.41	homeobox-leucine zipper protein ATHB-12-like isoform X1 OS=Cucurbita moschata OX...	[more]
A0A6J1J6P1	2.1e-38	57.89	homeobox-leucine zipper protein ATHB-12-like isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1J3H1	2.1e-38	57.89	homeobox-leucine zipper protein ATHB-12-like isoform X2 OS=Cucurbita maxima OX=3...	[more]
A0A6J1G2H1	3.1e-34	56.02	homeobox-leucine zipper protein ATHB-12-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CSPI04G08250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137302.1	3.1e-81	96.93	homeobox-leucine zipper protein ATHB-7-like [Cucumis sativus] >KAE8649264.1 hypo...	[more]
KAG6576630.1	3.5e-40	59.30	Homeobox-leucine zipper protein ATHB-7, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG7014681.1	3.5e-40	59.30	Homeobox-leucine zipper protein ATHB-7, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_038900057.1	5.9e-40	61.29	homeobox-leucine zipper protein ATHB-12-like isoform X2 [Benincasa hispida]	[more]
XP_022923069.1	7.8e-40	59.41	homeobox-leucine zipper protein ATHB-12-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CSPI04G08250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46680.1	4.1e-23	40.00	homeobox 7	[more]
AT2G46680.2	1.0e-21	39.22	homeobox 7	[more]
AT3G61890.1	1.7e-21	38.78	homeobox 12	[more]
AT2G22430.1	2.9e-16	44.44	homeobox protein 6	[more]
AT3G01470.1	8.3e-16	43.14	homeobox 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..98
None	No IPR available	GENE3D	1.10.10.60		coord: 1..67 e-value: 3.8E-16 score: 60.5
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 2..128
None	No IPR available	PANTHER	PTHR24326:SF122	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7	coord: 2..128
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 1..62 e-value: 4.6E-12 score: 56.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 3..56 e-value: 4.2E-16 score: 58.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 1..58 score: 15.256396
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 3..59 e-value: 1.03164E-11 score: 55.3273
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 64..96 e-value: 4.6E-9 score: 36.3
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 33..56
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 3..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G08250.1	CSPI04G08250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0047834	D-threo-aldose 1-dehydrogenase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding