CSPI04G07710 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G07710
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 5577321 .. 5577656 (-)
RNA-Seq ExpressionCSPI04G07710
SyntenyCSPI04G07710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGCTTCAATGCTTCACAGAACCTCTGGATTTTGGAAACTTATTGGCTCTCTTAGATATTGAGGGTGTTGATGGTTATCCTGTTATGTAGCAGTGATGGTTTTCAATAGAAGGGATCTCAGAGGAAGTAATGGAGTTTCTCTTTCTTTTCTTAGGCAAAGAGGTGCTGAAGAAATATGCTGGTCCAGCCAAACTGGTTGTTATTCTTTTATTTTCTTTATATGTTTTTTGGTGCTTGGTGGATGGGACCGTGGTGGTGGAGTTAAGTATTGAGGCTTCTGTGAAAAAGTATATGAAGAGCTGTGGTGGCTCTGGTGATCTTGAGATCTAA

mRNA sequence

ATGGTGAAGCTTCAATGCTTCACAGAACCTCTGGATTTTGGAAACTTATTGGCTCTCTTAGATATTGAGGGTGTTGATGGCAAAGAGGTGCTGAAGAAATATGCTGGTCCAGCCAAACTGGTTGTTATTCTTTTATTTTCTTTATATGTTTTTTGGTGCTTGGTGGATGGGACCGTGGTGGTGGAGTTAAGTATTGAGGCTTCTGTGAAAAAGTATATGAAGAGCTGTGGTGGCTCTGGTGATCTTGAGATCTAA

Coding sequence (CDS)

ATGGTGAAGCTTCAATGCTTCACAGAACCTCTGGATTTTGGAAACTTATTGGCTCTCTTAGATATTGAGGGTGTTGATGGCAAAGAGGTGCTGAAGAAATATGCTGGTCCAGCCAAACTGGTTGTTATTCTTTTATTTTCTTTATATGTTTTTTGGTGCTTGGTGGATGGGACCGTGGTGGTGGAGTTAAGTATTGAGGCTTCTGTGAAAAAGTATATGAAGAGCTGTGGTGGCTCTGGTGATCTTGAGATCTAA

Protein sequence

MVKLQCFTEPLDFGNLLALLDIEGVDGKEVLKKYAGPAKLVVILLFSLYVFWCLVDGTVVVELSIEASVKKYMKSCGGSGDLEI*
Homology
[Close]
BLAST of CSPI04G07710 vs. ExPASy TrEMBL
Match: A0A0A0KYV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081300 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.6e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MVKLQCFTEPLDFGNLLALLDIEGVDGKEVLKKYAGPAKLVVILLFSLYVFWCLVDGTVV 60
          MVKLQCFTEPLDFGNLLALLDIEGVDGKEVLKKYAGPAKLVVILLFSLYVFWCLVDGTVV
Sbjct: 1  MVKLQCFTEPLDFGNLLALLDIEGVDGKEVLKKYAGPAKLVVILLFSLYVFWCLVDGTVV 60

Query: 61 VELSIEASVKKYMKSCGGSGDLEI 85
          VELSIEASVKKYMKSCGGSGDLEI
Sbjct: 61 VELSIEASVKKYMKSCGGSGDLEI 84

[Close]
BLAST of CSPI04G07710 vs. NCBI nr
Match: KGN53552.1 (hypothetical protein Csa_015213 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 7.5e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MVKLQCFTEPLDFGNLLALLDIEGVDGKEVLKKYAGPAKLVVILLFSLYVFWCLVDGTVV 60
          MVKLQCFTEPLDFGNLLALLDIEGVDGKEVLKKYAGPAKLVVILLFSLYVFWCLVDGTVV
Sbjct: 1  MVKLQCFTEPLDFGNLLALLDIEGVDGKEVLKKYAGPAKLVVILLFSLYVFWCLVDGTVV 60

Query: 61 VELSIEASVKKYMKSCGGSGDLEI 85
          VELSIEASVKKYMKSCGGSGDLEI
Sbjct: 61 VELSIEASVKKYMKSCGGSGDLEI 84

The following BLAST results are available for this feature:
BLAST of CSPI04G07710 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G07710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYV63.6e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081300 PE=4 SV=1[more]
BLAST of CSPI04G07710 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53552.17.5e-39100.00hypothetical protein Csa_015213 [Cucumis sativus][more]
BLAST of CSPI04G07710 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G07710.1CSPI04G07710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane