CSPI04G06940 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTATTTATCTATATATATATATATATATATATATAACGATTTCTTCAAGAATTCAAGTCTCCTCCTCTCTATCTTCATATTCCAACAACCAAATCCTCCATTTCATCGGTAAATTCTCTCTCTCTTTTTCTCCTTTACGCGTTTTCTTTGTTTTGGAATTTTATTTTGATCTGCGTAGTACCCACAAATCGGAACTCCAAATATGTTACAATACCAGATTATTGCTTTGCTTTCCTTTTTTATTTCTGAATCTGGAATTTCTGATTATAGATTAATCTTTTTGTTGAAATACGCTGGAATTCATTTTTTTTTAATTAGTGTTATTTGTTGATTTCAAATTATTTTTTGTATGTGTCTTACGTTTCGGGAGATCGTGAATCTACAATTGGTGATCGATTTCGTGTTCTTTATGATTTGTGATCGGTTGTGATTGCGTTTATGGTTGTATCATTTTCTGTCGTGTGTTAATTTCTTTTAGGAAGTGGTATATTATGTAGAGAAGAACGGAGAGGGCAGGTTCAACTATTGATGTTTGAGTTTTTCTCTAATTTGTTCTATTTGAAGTTTCATAATTGAAAGATTACATCTGTAAAAGTTGGAATGCAAATTTCGCTCCTTCTTATAAGTGTTGGGACATGATCATAACATATTATCTACACTACCGAGCTTAGATCTCTTTGGTTTATCAATATAGAAGTTGCATTTTACTCGCACATTGAAGATATTTTTTGTTCATTCTATGTTAGGCATGTTCACATCGTTAACAAGTTTTGTTAAATGTGATCAATCCTTTTTGTCTCGATCTTTCTGGAAAAGAAAAAAGACACTATGGAGATCATTTTAGAGGCTGTCGAGTCATTGGCGTGAAGTCTATTTTTTAAATGTCTTATAAGTTCCAACAAATTAGCGCATCTCGTTGATTGAGAAGCAATCAATTTCTCTTTTCCCCTGGAAGCTGTTTTTGGAATTGTAATTATCTTGAATGGTTCTCCTCTGTGCTAAATGAGGAGTGTTGTGTTCCTAACTTCTCTGGTTTGAGTGAAGTTTGTTTGTCAATTTTCAGTTGTTATTAGAAGCTGATAAATCATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCACTGGGAAGTGTATTATTATTATTATTATTATTATTAGATGGTTTGTTTAGTTAAGTTGTTAATTTTAGTTAATTACTTCAATTACTTTGTCAATTAGAATGCAGGAATTAATAATAATTTAGATAATTTTGTTAGACCATCTATAACCCAGGCACTTTTAGGTTGTAATAAGGCTTTTGAAACATTTCATTTTAGAAATTTTGATGTTATCTCCATTGTTCTTGTGATGGATTTTTGCTCCCTACTATGGCTTTTTAAAAACAATCTCATACAAGTACAAAGTTGTCACATAAGGGATTCAATTGATGGTTTTGATAGAAGATCTTTTTACAAAGTTGCTGATTCCAAATCTTTTTAAATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTGATTTTCCAGCCATCTCTTTTCACCGAGCCTTCTTCTTCGTCGGTCGATTTCAAGAATGGTGTCGGTGCAGATAGCGAGCGGCGTTACCATCTTCTTCTCTAATTTCTATAATGTCTTTTAAGACTCTGGATTTCGTATCTACTCTTATTGTCTCGACCACCTTTCTAATGGTTTGTGTACTCTTTTACTCTTTGGACGTCAATAATCTGGATCCATCTTTCCAGTTTTCACCTTATTTTTCTTCCTATTGTAAATTCTTTTGGTTTAACCTATAATTTAAAATGATGAAGATTGTATTATTTGTTTTTTCATTGCTTAAATTATAGGAAGCAATGCTAATATCAATTTTGTGTC CTATTTATCTATATATATATATATATATATATATAACGATTTCTTCAAGAATTCAAGTCTCCTCCTCTCTATCTTCATATTCCAACAACCAAATCCTCCATTTCATCGTTGTTATTAGAAGCTGATAAATCATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTGATTTTCCAGCCATCTCTTTTCACCGAGCCTTCTTCTTCGTCGGTCGATTTCAAGAATGGTGTCGGTGCAGATAGCGAGCGGCGTTACCATCTTCTTCTCTAATTTCTATAATGTCTTTTAAGACTCTGGATTTCGTATCTACTCTTATTGTCTCGACCACCTTTCTAATGGTTTGTGTACTCTTTTACTCTTTGGACGTCAATAATCTGGATCCATCTTTCCAGTTTTCACCTTATTTTTCTTCCTATTGTAAATTCTTTTGGTTTAACCTATAATTTAAAATGATGAAGATTGTATTATTTGTTTTTTCATTGCTTAAATTATAGGAAGCAATGCTAATATCAATTTTGTGTC ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTGA MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHSAGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK* Homology
BLAST of CSPI04G06940 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.8e-24 Identity = 89/145 (61.38%), Postives = 99/145 (68.28%), Query Frame = 0
BLAST of CSPI04G06940 vs. ExPASy Swiss-Prot
Match: P24639 (Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 5.1e-05 Identity = 44/81 (54.32%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of CSPI04G06940 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 5.1e-05 Identity = 43/88 (48.86%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of CSPI04G06940 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.7e-05 Identity = 47/94 (50.00%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of CSPI04G06940 vs. ExPASy TrEMBL
Match: A0A0A0KV55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056610 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 3.2e-90 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of CSPI04G06940 vs. ExPASy TrEMBL
Match: A0A5A7TDL9 (Glycine-rich protein A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002540 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 2.5e-79 Identity = 163/173 (94.22%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of CSPI04G06940 vs. ExPASy TrEMBL
Match: A0A1S3BRX9 (glycine-rich protein A3-like OS=Cucumis melo OX=3656 GN=LOC103493032 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 2.5e-79 Identity = 163/173 (94.22%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of CSPI04G06940 vs. ExPASy TrEMBL
Match: A0A6J1ETR5 (glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111437642 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.6e-73 Identity = 159/181 (87.85%), Postives = 160/181 (88.40%), Query Frame = 0
BLAST of CSPI04G06940 vs. ExPASy TrEMBL
Match: A0A6J1J3I6 (glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111483065 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73 Identity = 159/181 (87.85%), Postives = 160/181 (88.40%), Query Frame = 0
BLAST of CSPI04G06940 vs. NCBI nr
Match: XP_004150942.2 (glycine-rich protein A3 [Cucumis sativus] >KGN53470.1 hypothetical protein Csa_014664 [Cucumis sativus]) HSP 1 Score: 340.9 bits (873), Expect = 6.5e-90 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of CSPI04G06940 vs. NCBI nr
Match: XP_008451874.1 (PREDICTED: glycine-rich protein A3-like [Cucumis melo] >KAA0040186.1 glycine-rich protein A3-like [Cucumis melo var. makuwa] >TYK16456.1 glycine-rich protein A3-like [Cucumis melo var. makuwa]) HSP 1 Score: 304.7 bits (779), Expect = 5.2e-79 Identity = 163/173 (94.22%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of CSPI04G06940 vs. NCBI nr
Match: XP_023553494.1 (glycine-rich protein A3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.0 bits (733), Expect = 1.1e-73 Identity = 160/181 (88.40%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of CSPI04G06940 vs. NCBI nr
Match: XP_022931474.1 (glycine-rich protein A3-like [Cucurbita moschata] >XP_022931475.1 glycine-rich protein A3-like [Cucurbita moschata] >XP_022931476.1 glycine-rich protein A3-like [Cucurbita moschata] >XP_022931477.1 glycine-rich protein A3-like [Cucurbita moschata] >KAG7015107.1 hypothetical protein SDJN02_22740, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 285.4 bits (729), Expect = 3.3e-73 Identity = 159/181 (87.85%), Postives = 160/181 (88.40%), Query Frame = 0
BLAST of CSPI04G06940 vs. NCBI nr
Match: XP_022984947.1 (glycine-rich protein A3-like [Cucurbita maxima] >XP_022984948.1 glycine-rich protein A3-like [Cucurbita maxima] >XP_022984949.1 glycine-rich protein A3-like [Cucurbita maxima] >XP_022984950.1 glycine-rich protein A3-like [Cucurbita maxima]) HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73 Identity = 159/181 (87.85%), Postives = 160/181 (88.40%), Query Frame = 0
BLAST of CSPI04G06940 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein ) HSP 1 Score: 142.5 bits (358), Expect = 3.2e-34 Identity = 116/192 (60.42%), Postives = 125/192 (65.10%), Query Frame = 0
BLAST of CSPI04G06940 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein ) HSP 1 Score: 141.0 bits (354), Expect = 9.2e-34 Identity = 111/189 (58.73%), Postives = 121/189 (64.02%), Query Frame = 0
BLAST of CSPI04G06940 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein ) HSP 1 Score: 141.0 bits (354), Expect = 9.2e-34 Identity = 111/189 (58.73%), Postives = 121/189 (64.02%), Query Frame = 0
BLAST of CSPI04G06940 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein ) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28 Identity = 97/173 (56.07%), Postives = 105/173 (60.69%), Query Frame = 0
BLAST of CSPI04G06940 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein ) HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26 Identity = 100/187 (53.48%), Postives = 115/187 (61.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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