CSPI04G06460 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G06460
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LEA_2 domain-containing protein
Location	Chr4: 4492220 .. 4493123 (-)
RNA-Seq Expression	CSPI04G06460
Synteny	CSPI04G06460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAACCTCACTTTTCAAATTTAGAACCCAAAAAATATCTATTAAAATTATTCATTATTTATTTAATATTCATTTTTTCTAAAAAAACTTAATTTTATTTGCACAATTTCCACACTTACTTACTTTCTCTATTCATTTTCTCTTCCATCATTTTATTTTGTATCCAAACACACCGCTATTCTCTTTCCTCTCTTCCAAATTCAGATCCCGTTCCACCTCCGCCGTAAGCACCGCCATGGGCAATCCCCACGGCCACGGCGATCACCCGCCATCTGGCCGCACCAACTTGGCGTCCTGTGTAGTTGCCACAGTCTTCTTGATCTTCCTCATCATCGTCATCCTTATCGTCTTCTTCACTGTCTTCAAGCCTCAGGATCCAAAGATCGCCGTTTCCGCCGTCCAGTTGCCGTCCTTCTCCGTCGCCAACGGCACTATCAATTTCACTTTCTCACAGTACGTCTCCGTCAAAAACCCTAACAAAGCCTCTTTCTCTCACTACGACAGTTCCCTCCAACTCCTCTACTCCGGTTCTCAAATTGGATTTATGTTCATTCCGGCCGGTAAAATCGACGCCGGTCAGACGCAGTACATGGCAGCTACCTTCTCTGTCCAGTCATTCCCGTTGGCTGCTCCAGTCGCCTCCGTTGGAGCTGGACCTACCTTCTCGGAGGGAATGAACGGGTACAGAGTCGGACCGATACTGGAGATTGAATCTAAGATGGATATGGCCGGTAGGGTTAGGGTATTGCACTTCTTCACTCACCACGTGGAAGCCACGTCGAGCTGCAGAGTCGCCATTGCTGTAAGTGATGGATCTGTGTTAGGTTTCCATTGCTAATTCTTCTTCTGGAAAATTTGGTCAGTTGGGTGTTGAGATTCTCATACTCTTTTAAGTGTAAAAA

mRNA sequence

AAACAAACCTCACTTTTCAAATTTAGAACCCAAAAAATATCTATTAAAATTATTCATTATTTATTTAATATTCATTTTTTCTAAAAAAACTTAATTTTATTTGCACAATTTCCACACTTACTTACTTTCTCTATTCATTTTCTCTTCCATCATTTTATTTTGTATCCAAACACACCGCTATTCTCTTTCCTCTCTTCCAAATTCAGATCCCGTTCCACCTCCGCCGTAAGCACCGCCATGGGCAATCCCCACGGCCACGGCGATCACCCGCCATCTGGCCGCACCAACTTGGCGTCCTGTGTAGTTGCCACAGTCTTCTTGATCTTCCTCATCATCGTCATCCTTATCGTCTTCTTCACTGTCTTCAAGCCTCAGGATCCAAAGATCGCCGTTTCCGCCGTCCAGTTGCCGTCCTTCTCCGTCGCCAACGGCACTATCAATTTCACTTTCTCACAGTACGTCTCCGTCAAAAACCCTAACAAAGCCTCTTTCTCTCACTACGACAGTTCCCTCCAACTCCTCTACTCCGGTTCTCAAATTGGATTTATGTTCATTCCGGCCGGTAAAATCGACGCCGGTCAGACGCAGTACATGGCAGCTACCTTCTCTGTCCAGTCATTCCCGTTGGCTGCTCCAGTCGCCTCCGTTGGAGCTGGACCTACCTTCTCGGAGGGAATGAACGGGTACAGAGTCGGACCGATACTGGAGATTGAATCTAAGATGGATATGGCCGGTAGGGTTAGGGTATTGCACTTCTTCACTCACCACGTGGAAGCCACGTCGAGCTGCAGAGTCGCCATTGCTGTAAGTGATGGATCTGTGTTAGGTTTCCATTGCTAATTCTTCTTCTGGAAAATTTGGTCAGTTGGGTGTTGAGATTCTCATACTCTTTTAAGTGTAAAAA

Coding sequence (CDS)

ATGGGCAATCCCCACGGCCACGGCGATCACCCGCCATCTGGCCGCACCAACTTGGCGTCCTGTGTAGTTGCCACAGTCTTCTTGATCTTCCTCATCATCGTCATCCTTATCGTCTTCTTCACTGTCTTCAAGCCTCAGGATCCAAAGATCGCCGTTTCCGCCGTCCAGTTGCCGTCCTTCTCCGTCGCCAACGGCACTATCAATTTCACTTTCTCACAGTACGTCTCCGTCAAAAACCCTAACAAAGCCTCTTTCTCTCACTACGACAGTTCCCTCCAACTCCTCTACTCCGGTTCTCAAATTGGATTTATGTTCATTCCGGCCGGTAAAATCGACGCCGGTCAGACGCAGTACATGGCAGCTACCTTCTCTGTCCAGTCATTCCCGTTGGCTGCTCCAGTCGCCTCCGTTGGAGCTGGACCTACCTTCTCGGAGGGAATGAACGGGTACAGAGTCGGACCGATACTGGAGATTGAATCTAAGATGGATATGGCCGGTAGGGTTAGGGTATTGCACTTCTTCACTCACCACGTGGAAGCCACGTCGAGCTGCAGAGTCGCCATTGCTGTAAGTGATGGATCTGTGTTAGGTTTCCATTGCTAA

Protein sequence

MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRVAIAVSDGSVLGFHC*

Homology

[Close]

BLAST of CSPI04G06460 vs. ExPASy TrEMBL
Match: A0A0A0KX26 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052640 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.8e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60
           MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF
Sbjct: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60

Query: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120
           SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA
Sbjct: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120

Query: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180
           ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA
Sbjct: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180

Query: 181 TSSCRVAIAVSDGSVLGFHC 201
           TSSCRVAIAVSDGSVLGFHC
Sbjct: 181 TSSCRVAIAVSDGSVLGFHC 200

[Close]

BLAST of CSPI04G06460 vs. ExPASy TrEMBL
Match: A0A5D3D1L2 (Proline-rich receptor-like protein kinase PERK3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003970 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 189/200 (94.50%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60
           MGNPH  G+ PPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF
Sbjct: 1   MGNPHIPGEDPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60

Query: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120
           SV NGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKI+AGQTQYMA
Sbjct: 61  SVTNGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIEAGQTQYMA 120

Query: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180
           ATFSVQSFPLA+PVA+VGAGPTFS GMNGYRVGPILEIESKMDMAGRVRVL+FFTHHVEA
Sbjct: 121 ATFSVQSFPLASPVAAVGAGPTFSGGMNGYRVGPILEIESKMDMAGRVRVLNFFTHHVEA 180

Query: 181 TSSCRVAIAVSDGSVLGFHC 201
            SSCRVAIAVSDGSVLGFHC
Sbjct: 181 ISSCRVAIAVSDGSVLGFHC 200

[Close]

BLAST of CSPI04G06460 vs. ExPASy TrEMBL
Match: A0A1S3BSP1 (uncharacterized protein LOC103493106 OS=Cucumis melo OX=3656 GN=LOC103493106 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 189/200 (94.50%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60
           MGNPH  G+ PPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF
Sbjct: 1   MGNPHIPGEDPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60

Query: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120
           SV NGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKI+AGQTQYMA
Sbjct: 61  SVTNGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIEAGQTQYMA 120

Query: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180
           ATFSVQSFPLA+PVA+VGAGPTFS GMNGYRVGPILEIESKMDMAGRVRVL+FFTHHVEA
Sbjct: 121 ATFSVQSFPLASPVAAVGAGPTFSGGMNGYRVGPILEIESKMDMAGRVRVLNFFTHHVEA 180

Query: 181 TSSCRVAIAVSDGSVLGFHC 201
            SSCRVAIAVSDGSVLGFHC
Sbjct: 181 ISSCRVAIAVSDGSVLGFHC 200

[Close]

BLAST of CSPI04G06460 vs. ExPASy TrEMBL
Match: A0A6J1IZG6 (uncharacterized protein LOC111481290 OS=Cucurbita maxima OX=3661 GN=LOC111481290 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.4e-96
Identity = 178/194 (91.75%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 7   HGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 66
           H  HPPSGRTNLASC+VAT+FLIF+IIV+LIVFFTVFKPQDPKIAVSAVQLPSFSVANGT
Sbjct: 47  HDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 106

Query: 67  INFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQ 126
           +NFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+GQTQYMAATFSVQ
Sbjct: 107 VNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQ 166

Query: 127 SFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRV 186
           SFPLAAPV ++GAGPT+SEGMNGYR+GP LEIESKMDMAGRVRVLHFFTHHVEAT SCRV
Sbjct: 167 SFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRV 226

Query: 187 AIAVSDGSVLGFHC 201
           AIAVSDGSVLGFHC
Sbjct: 227 AIAVSDGSVLGFHC 240

[Close]

BLAST of CSPI04G06460 vs. ExPASy TrEMBL
Match: A0A6J1FLK4 (uncharacterized protein LOC111446913 OS=Cucurbita moschata OX=3662 GN=LOC111446913 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.4e-96
Identity = 178/194 (91.75%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 7   HGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 66
           H  HPPSGRTNLASC+VAT+FLIF+IIV+LIVFFTVFKPQDPKIAVSAVQLPSFSVANGT
Sbjct: 5   HDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 64

Query: 67  INFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQ 126
           +NFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+GQTQYMAATFSVQ
Sbjct: 65  VNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQ 124

Query: 127 SFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRV 186
           SFPLAAPV ++GAGPT+SEGMNGYR+GP LEIESKMDMAGRVRVLHFFTHHVEAT SCRV
Sbjct: 125 SFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRV 184

Query: 187 AIAVSDGSVLGFHC 201
           AIAVSDGSVLGFHC
Sbjct: 185 AIAVSDGSVLGFHC 198

[Close]

BLAST of CSPI04G06460 vs. NCBI nr
Match: XP_004148992.1 (uncharacterized protein LOC101209064 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 5.7e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60
           MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF
Sbjct: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60

Query: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120
           SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA
Sbjct: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120

Query: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180
           ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA
Sbjct: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180

Query: 181 TSSCRVAIAVSDGSVLGFHC 201
           TSSCRVAIAVSDGSVLGFHC
Sbjct: 181 TSSCRVAIAVSDGSVLGFHC 200

[Close]

BLAST of CSPI04G06460 vs. NCBI nr
Match: KAE8649211.1 (hypothetical protein Csa_014987 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 4.0e-99
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60
           MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF
Sbjct: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60

Query: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120
           SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA
Sbjct: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120

Query: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180
           ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA
Sbjct: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180

Query: 181 TSSCRVAIAV 191
           TSSCRVAIAV
Sbjct: 181 TSSCRVAIAV 190

[Close]

BLAST of CSPI04G06460 vs. NCBI nr
Match: XP_008451958.1 (PREDICTED: uncharacterized protein LOC103493106 [Cucumis melo] >KAA0044895.1 proline-rich receptor-like protein kinase PERK3 [Cucumis melo var. makuwa] >TYK16576.1 proline-rich receptor-like protein kinase PERK3 [Cucumis melo var. makuwa])

HSP 1 Score: 368.6 bits (945), Expect = 3.4e-98
Identity = 189/200 (94.50%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60
           MGNPH  G+ PPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF
Sbjct: 1   MGNPHIPGEDPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60

Query: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120
           SV NGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKI+AGQTQYMA
Sbjct: 61  SVTNGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIEAGQTQYMA 120

Query: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180
           ATFSVQSFPLA+PVA+VGAGPTFS GMNGYRVGPILEIESKMDMAGRVRVL+FFTHHVEA
Sbjct: 121 ATFSVQSFPLASPVAAVGAGPTFSGGMNGYRVGPILEIESKMDMAGRVRVLNFFTHHVEA 180

Query: 181 TSSCRVAIAVSDGSVLGFHC 201
            SSCRVAIAVSDGSVLGFHC
Sbjct: 181 ISSCRVAIAVSDGSVLGFHC 200

[Close]

BLAST of CSPI04G06460 vs. NCBI nr
Match: XP_038899581.1 (uncharacterized protein LOC120086842 [Benincasa hispida])

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97
Identity = 184/200 (92.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60
           M  PHGH  HPPSGRTNLASC+VATVFLIFL+I++LIVFFTVFKPQDPKIAVSAVQLPSF
Sbjct: 1   MSKPHGH--HPPSGRTNLASCIVATVFLIFLVIIVLIVFFTVFKPQDPKIAVSAVQLPSF 60

Query: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120
           SVANG+INFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA
Sbjct: 61  SVANGSINFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120

Query: 121 ATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEA 180
           ATFSVQSF LAAPVA+VGAGPTFSEGMNGYR+GP LEIESKMDM GRVRVLHFFTHHVE 
Sbjct: 121 ATFSVQSFSLAAPVAAVGAGPTFSEGMNGYRIGPTLEIESKMDMVGRVRVLHFFTHHVEV 180

Query: 181 TSSCRVAIAVSDGSVLGFHC 201
           TSSCRVAIAVSDGSVLGFHC
Sbjct: 181 TSSCRVAIAVSDGSVLGFHC 198

[Close]

BLAST of CSPI04G06460 vs. NCBI nr
Match: XP_022982486.1 (uncharacterized protein LOC111481290 [Cucurbita maxima])

HSP 1 Score: 360.9 bits (925), Expect = 7.0e-96
Identity = 178/194 (91.75%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 7   HGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 66
           H  HPPSGRTNLASC+VAT+FLIF+IIV+LIVFFTVFKPQDPKIAVSAVQLPSFSVANGT
Sbjct: 47  HDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 106

Query: 67  INFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQ 126
           +NFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+GQTQYMAATFSVQ
Sbjct: 107 VNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQ 166

Query: 127 SFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRV 186
           SFPLAAPV ++GAGPT+SEGMNGYR+GP LEIESKMDMAGRVRVLHFFTHHVEAT SCRV
Sbjct: 167 SFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRV 226

Query: 187 AIAVSDGSVLGFHC 201
           AIAVSDGSVLGFHC
Sbjct: 227 AIAVSDGSVLGFHC 240

[Close]

BLAST of CSPI04G06460 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 219.9 bits (559), Expect = 1.8e-57
Identity = 136/344 (39.53%), Postives = 169/344 (49.13%), Query Frame = 0


Query: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60
           M  PH       SGRTNLASC VATVFL+ L++V+L+V+FTVFKP+DPKI+V+AVQLPSF
Sbjct: 1   MAKPHDR--RRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSF 60

Query: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120
           +V+N T NF+FSQYV+V+NPN+A FSHYDSS+QLLYSG+Q+GFMFIPAGKID+G+ QYMA
Sbjct: 61  AVSNNTANFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMA 120

Query: 121 ATFSVQSFPLAAPVASV------------------------------------------- 180
           ATF+V SFP++ P +S                                            
Sbjct: 121 ATFTVHSFPISPPSSSAISTVSAAVIPDSPIIPGPPDFTVTPRNPDSPYFPGYPESPDLP 180

Query: 181 ------------------------------------------------------------ 201
                                                                       
Sbjct: 181 GNPGSPDFSGNPGPPSFPRNPGSPEFPGNPGAPIIPRNPGSPEFPINPPRNPGAPVIPRN 240

[Close]

BLAST of CSPI04G06460 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53
Identity = 102/185 (55.14%), Postives = 146/185 (78.92%), Query Frame = 0


Query: 16  TNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGTINFTFSQYV 75
           +NLASC VAT+F++FLII  L V+ TVF+P+DP+I+V++V++PSFSVAN +++FTFSQ+ 
Sbjct: 6   SNLASCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSSVSFTFSQFS 65

Query: 76  SVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQSFPLAAPVA 135
           +V+NPN+A+FSHY++ +QL Y G++IG+ F+PAG+I++G+T+ M ATFSVQSFPLAA  +
Sbjct: 66  AVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAASS 125

Query: 136 SVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRVAIAVSDGSV 195
           S  +   F    N  R G  +EIESK++MAGRVRVL  FTH + A  +CR+AI+ SDGS+
Sbjct: 126 SQISAAQF---QNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSI 185

Query: 196 LGFHC 201
           +   C
Sbjct: 186 VAVRC 187

[Close]

BLAST of CSPI04G06460 vs. TAIR 10
Match: AT4G23930.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 156.4 bits (394), Expect = 2.5e-38
Identity = 87/185 (47.03%), Postives = 121/185 (65.41%), Query Frame = 0


Query: 16  TNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGTINFTFSQYV 75
           +NLASC VAT+F++FLII  L V+ TVF+P+DP+I+V++V++PSFSVAN +         
Sbjct: 6   SNLASCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSS--------- 65

Query: 76  SVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQSFPLAAPVA 135
                             L Y G++IG+ F+PAG+I++G+T+ M ATFSVQSFPLAA  +
Sbjct: 66  ------------------LFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAASS 125

Query: 136 SVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRVAIAVSDGSV 195
           S  +   F    N  R G  +EIESK++MAGRVRVL  FTH + A  +CR+AI+ SDGS+
Sbjct: 126 SQISAAQF---QNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSI 160

Query: 196 LGFHC 201
           +   C
Sbjct: 186 VAVRC 160

[Close]

BLAST of CSPI04G06460 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-15
Identity = 60/193 (31.09%), Postives = 100/193 (51.81%), Query Frame = 0


Query: 15  RTNLASCVVATVFLIFLI-IVILIVFFTVFKPQDPKIAVSAVQLPSFSVA------NGTI 74
           + N   C+  T+ LI LI IVI+I+ FT+FKP+ P   + +V +     +         +
Sbjct: 48  KRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLL 107

Query: 75  NFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQS 134
           N T +  +S+KNPN+  FS+  SS  L Y G  IG   +PA +I A +T  +  T ++ +
Sbjct: 108 NLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMA 167

Query: 135 FPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRVA 194
             L +           S+ M G     ++ + + + + G+V VL  F   V+++SSC ++
Sbjct: 168 DRLLSET------QLLSDVMAG-----VIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLS 227

Query: 195 IAVSDGSVLGFHC 201
           I+VSD +V   HC
Sbjct: 228 ISVSDRNVTSQHC 229

[Close]

BLAST of CSPI04G06460 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 61.6 bits (148), Expect = 8.2e-10
Identity = 49/198 (24.75%), Postives = 87/198 (43.94%), Query Frame = 0


Query: 10  HPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGT--- 69
           H    R   + CV AT  ++  I++ L+  FTVF+ +DP I ++ V +       GT   
Sbjct: 30  HRSRNRIKCSICVTATSLILTTIVLTLV--FTVFRVKDPIIKMNGVMVNGLDSVTGTNQV 89

Query: 70  ----INFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAAT 129
                N +    VSVKNPN ASF + +++  + Y G+ +G      GK    +T  M  T
Sbjct: 90  QLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVT 149

Query: 130 FSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATS 189
             +    L   ++  G G   S          ++ + S   + G+V+++     HV    
Sbjct: 150 VDIM---LDRILSDPGLGREISR-------SGLVNVWSYTRVGGKVKIMGIVKKHVTVKM 209

Query: 190 SCRVAIAVSDGSVLGFHC 201
           +C +A+ ++  ++    C
Sbjct: 210 NCTMAVNITGQAIQDVDC 215

The following BLAST results are available for this feature:

BLAST of CSPI04G06460 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G06460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX26	2.8e-106	100.00	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052640 PE=4 ...	[more]
A0A5D3D1L2	1.6e-98	94.50	Proline-rich receptor-like protein kinase PERK3 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BSP1	1.6e-98	94.50	uncharacterized protein LOC103493106 OS=Cucumis melo OX=3656 GN=LOC103493106 PE=...	[more]
A0A6J1IZG6	3.4e-96	91.75	uncharacterized protein LOC111481290 OS=Cucurbita maxima OX=3661 GN=LOC111481290...	[more]
A0A6J1FLK4	3.4e-96	91.75	uncharacterized protein LOC111446913 OS=Cucurbita moschata OX=3662 GN=LOC1114469...	[more]

BLAST of CSPI04G06460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148992.1	5.7e-106	100.00	uncharacterized protein LOC101209064 [Cucumis sativus]	[more]
KAE8649211.1	4.0e-99	100.00	hypothetical protein Csa_014987 [Cucumis sativus]	[more]
XP_008451958.1	3.4e-98	94.50	PREDICTED: uncharacterized protein LOC103493106 [Cucumis melo] >KAA0044895.1 pro...	[more]
XP_038899581.1	1.7e-97	92.00	uncharacterized protein LOC120086842 [Benincasa hispida]	[more]
XP_022982486.1	7.0e-96	91.75	uncharacterized protein LOC111481290 [Cucurbita maxima]	[more]

BLAST of CSPI04G06460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64450.1	1.8e-57	39.53	Glycine-rich protein family	[more]
AT4G23930.1	1.6e-53	55.14	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G23930.2	2.5e-38	47.03	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G54200.1	2.2e-15	31.09	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G46150.1	8.2e-10	24.75	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 75..184 e-value: 1.8E-9 score: 38.1
None	No IPR available	PANTHER	PTHR31852:SF22	OS05G0238400 PROTEIN	coord: 9..200
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 9..200
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 30..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G06460.1	CSPI04G06460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane