CSPI04G05790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G05790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Location	Chr4: 3925742 .. 3929999 (-)
RNA-Seq Expression	CSPI04G05790
Synteny	CSPI04G05790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCATATAATCAAAACCTATTTATCGAAGCTATATGGATAGAAATCTCTAAATTTAGTACTAAAAAAACATCCCTAAATTGAACTACCAACACCAACCCATTTATTGAACTTCACAAAAGAAACTAAAATCTAACCACCAATGAATTACTAAGAGAAGCGCTTTGTTGGAGCAATGGCCTGATCCCAATGGGAACTCAAAAGAATCCCAATTTTGGAATTCATTTTCAAAACTCATCGAGAAATGGAGCAATCTCCGGCGGATTCTTCGACGACGAGTATCGAAACTGAATGTCAGATTCCAGCGACATCCCCAAATTCGACCACTTCTTCTGTCATTGAAGATTGCACCAAAACCCAATCTTCTTTGAGCCAAGCCCAGATTCTCAAAGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATGGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCTCTGTTCTCTCCGAGGTTTTATAGTTTTCACATCCCTTTTCTTGTTTTCCTGTTTGATTTAACCAACTGAATTAGTACGTAGTTCAATTGCACATTTTTTTATTATCCAACTTCTAGTTCTTGCAGAGCATGTCCTATAATTGTGATATTTTCCATCTTTAATTGGGTTGCTTTTAATATGTTGAAGATGGAATAAAAACACTATTTTTGAATTTTTGAGTTCCACAACTTTACCAAATTTGATTATTAATGGTGAATCCTGACTTTGCCCGTCTTGTCATGCTGTTTATCTGACTGGGATTAGGATAATCTTGTAGGTCACCAGCAACTCGATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGGTAAGTGAAACTGTGAAATAAAAAAGGTATGATTTTGACTGACAGGAATGGTCGAGTATATGGTAGTTAGATGTGTCATTGTCTACCACTGATGCTGCTAAACTTATTATATACATCTGGTCATTTTTGTGTATTAATCAAAATTCAATCTGTTCTTTCATATGTTCCTTGTTCTGTTTGAGATGTGGTTGTTGAACTTAGTGATTGCCTTGAGATTGTGTGTTATGTTACTGGGTTTTGTGCCGGTTTTTCATTATAAATTTGGAGAAGAGGTTGGTTGCAATCAGACTCGTGAAGACATAGAACTTCTTCAATGCAAAAGATATATGCAAGATGCACAAACTCTTAGCATTACATAGCTTTAGTCAGATTGTGTTCTATTGTGAATTTTAGTATAACAAAGGTCAAAGGTTATTCTACATTCCTCATAACTTTCATTCGTCATATCCACAGTTATCGTAGGTTGCTTCTATAATATTAACAAATACCCTTTTTATTTGATGATACTCCACATGAGTTTTTTGTACTTTCAACCCTGTAGTGCTTGATGCGGCAACAAAGGGCAATCGATACATTAATTCTTCCTTGAGGTATGCTTCAATATCTTCTGGTATCTCTTTTGTTCTGACTTAGTGTCCTTTGTTTTCTGTTTCTAGTTAAAGACTAATTCACTGTTGAATGAACCATATCATGATAGGACGAGCATAATTGTATTTTTGGTTCTTGAGATATAAGTTCCAATTTATTTGACGTCTGTGTTTCCTATGAATAATGCACAACTAGCAAAAATTAAAATTTTAACTCCATTTGTCAAAATGTGTTAACTCTGTGGATGCTGTAGCTTTTTACAACCTGCTGCATGAAATGATCAATGGAATTTCTTGAACCAAGTACAAGTCAGAGATCAGATTGAAACATACACATTAAAAAAGGTTTCTTCGTCCATAGTTATAGTTTAATCTTTTGAGTTTTTTAGCAAAACCTATTATGCATTTTACCCAATTGTTACTTTAGAAACTGACGTTAGGTAAGTAATCATTAATGATAGCATTTTTATTCAACGATTAACTCCAGATATTAAACAGTTCATTATGTTTGTTGATTTCTGTTTTATTCAATTGTAACAGAAATGATGCTTGAATATACGATGCCAGGTAGCTAAGTAACTATAAATATGTTACTTGGTACTTAAACTCATTGAAATCTTTTTCTGAAAAAATTATTAAGAAATATTATTGTTATAGTAATCAAAATTGCAATTTGGACACTTTGAGAAACTATTTGGTGTTTCTCTTTGTTATATGGGGAGTTAAGTCCCTTCATGAGTTCTCTGTTAGTTTGATTGTGTTCAAGTGTGGAAAATTTTTAAGGTTGCTTCAATAGATATTATTTATATATATATATAAAGAAAAAATAGGTGTTGGATGTTAGCCTCATACTACAAATCTGCTTAGCCATCGCATTGAACTCTCTTTTTTGCATCTCTCATCTGGTGGGAGCATAAGTTTTTGAGAATTTTTTATTTCCTTAACCACTAGGGTTTGACTTAATTAAGGCACTATTTTTGTTATGTGAAACATTTTTCTGGCTCCAATTTATATTTTGATGATTCTACTTGCCAAGTTCAGTATATTGGCGGAGTTGTGTTTGTCCTACTCCTATCAAAGATTAATCTGCGAAAAGATTAGTAGATTACACGTAGGTATCTTTTTATTTGTACATAGGCTAAGTTATAAAAATACCCCTAAACTATGGTGCATGTTTCAATTATACCTTGAAATTTGGAAAGTTTCATTTTATCCCTTGAAGTTCCGGTTTCAAAACAAATCTTGAGATTTTTGTCGTTAACTTCATGTATAAAAAAGTTAGTTTTTACTTTTTTGTTGTTTATGTGAAGAAATTTAAACACACAAGAAGTAAATTTGGGATTAGTGTTAGCATAAGAAATCATAAATGAAAACACAAAAAAATTGGGGGGCGTGGGGATGTGGACAACTAAAATGTTCATGCTTTCCACTTCTAACTTCACATACCATGAGTTGCCATCATATAACATATGACTAACTTATCTCTAAGATTATAGTTACAATGATGTTGTTATATTGATGACTGATAATGTTTTTTCCCCATCATGTGATAAGAATAATGCATGAAATAGAAAGATAGTAACAAAAGGGAAGGTGAAGCATCCCCATTGGCCAAAAGAGTTGTAATTACTCTTGGAAATACGGAGTGATAAATTATTCAACTAACATAGGATGATTTCTTGACACTTGCCCCTTGGAGACAAATGGACTTAAAAGTAGAAGCAAAAGAAGAGGAAAAAACTCAAAGATGATCCAATATTCTCTCACATTTGGCAAAGAGTCCCCCAAGTGGGGGAGAAGAGAAAGTAAATTCAGATTCTTCTCTTCTATTCTATCCACAATACAGATCTTGTGTTAGGAACTGTCCAAAAGAAGAATCTAATCTATTAAGTATCTTCCACACCCAGAAAAACTTTGAAGTAACTGTTGGGAGACATTGGATTCTGCCATATAAATGCTTGGACAAGGAAGAGCGAGAGCAACTGTATAGGCCAGAGTTTTCAGGGCACAAGTTCCAAAGTTACTTGATCGAACATCTCTGTCAATGGGATTAACCTAGTTCATCTCTCTAATTCAAAACTTTTAAGATCTCGTTTAAACTGAAAATTCGTACTCCCTTAATTTCCATCACATACTTCTATACTATCTGTTGAGGATTAGTAAAACACAATTTTACATTCTAAAGATTTTCATCAATGTTTTTCTGTTCTAATTGAAGCTTACACCTTTTAAACAATCTTGAGGATCATGATTAGGACGGGTTGCAAACGCCGTAACTTTGGATTATATTTTCTTGTTTTGCAGATTGAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATTCCTTCTTTTTTTACTTTTTTGTCATGCTCCCAGATTAGTTACATGCCTAGTAGATCATTCTAATGTTTCTTTATCTGGCTGTCATTTCCTCATGTTTCAATCCTCTGCATTACACAACTTCCTTGATTCTTGCTTAGAAAGGTTTTGAGGAAGAACGTGGATGAACTTGACTTGGCTGTGAACAAGCTCCTTAATTTTCCATGAGCTCCACTCGGTCGTATCGTGGCTCTTGCAAGCTCAAGGATTTTTATTTCCACCAAAGAGAAAATACAGTTCATGAAGAAAAAAATATTCATTCCATAGCTTCCTTCACATTTTACTCTAGGAAGCATCTCATTGCATGTTAGGTTCTTTGATGTATTTATCCAGAAATAGATTTTCTTGATTGCTTAATAATATATACTGGTTTGTGGTTTCAATAGTTATAATGGTCTCTTTTCCTTGGAGGCTATTCAG

mRNA sequence

AAATCATATAATCAAAACCTATTTATCGAAGCTATATGGATAGAAATCTCTAAATTTAGTACTAAAAAAACATCCCTAAATTGAACTACCAACACCAACCCATTTATTGAACTTCACAAAAGAAACTAAAATCTAACCACCAATGAATTACTAAGAGAAGCGCTTTGTTGGAGCAATGGCCTGATCCCAATGGGAACTCAAAAGAATCCCAATTTTGGAATTCATTTTCAAAACTCATCGAGAAATGGAGCAATCTCCGGCGGATTCTTCGACGACGAGTATCGAAACTGAATGTCAGATTCCAGCGACATCCCCAAATTCGACCACTTCTTCTGTCATTGAAGATTGCACCAAAACCCAATCTTCTTTGAGCCAAGCCCAGATTCTCAAAGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATGGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCTCTGTTCTCTCCGAGGTCACCAGCAACTCGATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGCAATCGATACATTAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTAAAGGTTTTGAGGAAGAACGTGGATGAACTTGACTTGGCTGTGAACAAGCTCCTTAATTTTCCATGAGCTCCACTCGGTCGTATCGTGGCTCTTGCAAGCTCAAGGATTTTTATTTCCACCAAAGAGAAAATACAGTTCATGAAGAAAAAAATATTCATTCCATAGCTTCCTTCACATTTTACTCTAGGAAGCATCTCATTGCATGTTAGGTTCTTTGATGTATTTATCCAGAAATAGATTTTCTTGATTGCTTAATAATATATACTGGTTTGTGGTTTCAATAGTTATAATGGTCTCTTTTCCTTGGAGGCTATTCAG

Coding sequence (CDS)

ATGGAGCAATCTCCGGCGGATTCTTCGACGACGAGTATCGAAACTGAATGTCAGATTCCAGCGACATCCCCAAATTCGACCACTTCTTCTGTCATTGAAGATTGCACCAAAACCCAATCTTCTTTGAGCCAAGCCCAGATTCTCAAAGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATGGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCTCTGTTCTCTCCGAGGTCACCAGCAACTCGATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGCAATCGATACATTAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTAAAGGTTTTGAGGAAGAACGTGGATGAACTTGACTTGGCTGTGAACAAGCTCCTTAATTTTCCATGA

Protein sequence

MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP*

Homology

[Close]

BLAST of CSPI04G05790 vs. ExPASy TrEMBL
Match: A0A0A0KWT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.6e-72
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ 120
           MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ
Sbjct: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ 120

Query: 121 EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP
Sbjct: 121 EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 153

[Close]

BLAST of CSPI04G05790 vs. ExPASy TrEMBL
Match: A0A1S3BTP0 (uncharacterized protein LOC103493156 OS=Cucumis melo OX=3656 GN=LOC103493156 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.5e-70
Identity = 148/153 (96.73%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ 120
           +AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ
Sbjct: 61  IAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ 120

Query: 121 EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP
Sbjct: 121 EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 153

[Close]

BLAST of CSPI04G05790 vs. ExPASy TrEMBL
Match: A0A6J1EUG1 (uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC111437668 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59
Identity = 133/158 (84.18%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPSDSS-SSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60

Query: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           LRLNQEMKGMDNLAAQLK+LRKNVDELDLAVNKLLNFP
Sbjct: 121 LRLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]

BLAST of CSPI04G05790 vs. ExPASy TrEMBL
Match: A0A6J1J2E9 (uncharacterized protein LOC111482798 OS=Cucurbita maxima OX=3661 GN=LOC111482798 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 132/158 (83.54%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPSDSS-SSIEAGSQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60

Query: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           K+SLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KNSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           LRLNQEMKGMDNLAAQLK+LRKNVDELDLAVNKLLNFP
Sbjct: 121 LRLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]

BLAST of CSPI04G05790 vs. ExPASy TrEMBL
Match: A0A6J1C7Z8 (uncharacterized protein LOC111008257 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008257 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.2e-50
Identity = 119/158 (75.32%), Postives = 132/158 (83.54%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60
           M+Q+ AD ST   + + QIP TSPNST     T SV+ED TK++  L Q +I KAIEVVE
Sbjct: 1   MDQARADFST---KIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVE 60

Query: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLA+AESFTSLFASLRS LSE + NSIDHMHCF+DAAG LQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           LRLNQEMKG+DNLAAQLKVLRKNVD LD AVNKLL+FP
Sbjct: 121 LRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 155

[Close]

BLAST of CSPI04G05790 vs. NCBI nr
Match: XP_004146523.1 (uncharacterized protein LOC101210623 [Cucumis sativus] >KGN53339.1 hypothetical protein Csa_015069 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 5.4e-72
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ 120
           MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ
Sbjct: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ 120

Query: 121 EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP
Sbjct: 121 EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 153

[Close]

BLAST of CSPI04G05790 vs. NCBI nr
Match: XP_008452025.1 (PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 148/153 (96.73%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ 120
           +AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ
Sbjct: 61  IAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQ 120

Query: 121 EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP
Sbjct: 121 EMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 153

[Close]

BLAST of CSPI04G05790 vs. NCBI nr
Match: XP_023553161.1 (uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 6.9e-59
Identity = 134/158 (84.81%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60
           MEQSP+DSS TSIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPSDSS-TSIEPGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60

Query: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           LRLNQEMKGMDNLAAQLK+LRKNVDELDLAVNKLLNFP
Sbjct: 121 LRLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]

BLAST of CSPI04G05790 vs. NCBI nr
Match: XP_022931514.1 (uncharacterized protein LOC111437668 [Cucurbita moschata] >KAG6577190.1 hypothetical protein SDJN03_24764, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 133/158 (84.18%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPSDSS-SSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60

Query: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           LRLNQEMKGMDNLAAQLK+LRKNVDELDLAVNKLLNFP
Sbjct: 121 LRLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]

BLAST of CSPI04G05790 vs. NCBI nr
Match: XP_022984532.1 (uncharacterized protein LOC111482798 [Cucurbita maxima])

HSP 1 Score: 235.3 bits (599), Expect = 3.4e-58
Identity = 132/158 (83.54%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPSDSS-SSIEAGSQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60

Query: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           K+SLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KNSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           LRLNQEMKGMDNLAAQLK+LRKNVDELDLAVNKLLNFP
Sbjct: 121 LRLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]

BLAST of CSPI04G05790 vs. TAIR 10
Match: AT4G23330.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). )

HSP 1 Score: 156.0 bits (393), Expect = 2.5e-38
Identity = 82/114 (71.93%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 40  SSLSQAQILKAIEVVEKDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQE 99
           SSL+Q +ILK +  VEKDS A+AESF+SLF SLRS LSE T +S+DHM CF +AAGRLQE
Sbjct: 34  SSLNQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQE 93

Query: 100 SVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 154
           + LDAATKGNRYINS LRLN+E+KG++NLAA+LK LRKNVD LD AVNKLL  P
Sbjct: 94  NALDAATKGNRYINSCLRLNEEIKGVENLAARLKHLRKNVDVLDTAVNKLLRPP 147

[Close]

BLAST of CSPI04G05790 vs. TAIR 10
Match: AT4G23330.1 (BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 40  SSLSQAQILKAIEVVEKDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQE 99
           SSL+Q +ILK +  VEKDS A+AESF+SLF SLRS LSE T +S+DHM CF +AAGRLQE
Sbjct: 34  SSLNQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQE 93

Query: 100 SVLDAATKGNRYINSSLRL 119
           + LDAATKGNRYINS LRL
Sbjct: 94  NALDAATKGNRYINSCLRL 112

The following BLAST results are available for this feature:

BLAST of CSPI04G05790 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G05790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWT2	2.6e-72	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1	[more]
A0A1S3BTP0	5.5e-70	96.73	uncharacterized protein LOC103493156 OS=Cucumis melo OX=3656 GN=LOC103493156 PE=...	[more]
A0A6J1EUG1	7.4e-59	84.18	uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A6J1J2E9	1.7e-58	83.54	uncharacterized protein LOC111482798 OS=Cucurbita maxima OX=3661 GN=LOC111482798...	[more]
A0A6J1C7Z8	8.2e-50	75.32	uncharacterized protein LOC111008257 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CSPI04G05790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146523.1	5.4e-72	100.00	uncharacterized protein LOC101210623 [Cucumis sativus] >KGN53339.1 hypothetical ...	[more]
XP_008452025.1	1.1e-69	96.73	PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo]	[more]
XP_023553161.1	6.9e-59	84.81	uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo]	[more]
XP_022931514.1	1.5e-58	84.18	uncharacterized protein LOC111437668 [Cucurbita moschata] >KAG6577190.1 hypothet...	[more]
XP_022984532.1	3.4e-58	83.54	uncharacterized protein LOC111482798 [Cucurbita maxima]	[more]

BLAST of CSPI04G05790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23330.2	2.5e-38	71.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G23330.1	1.2e-24	72.15	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation fa...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 118..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR39708	OS07G0483400 PROTEIN	coord: 10..152
IPR019314	BLOC-1-related complex subunit 6	PFAM	PF10157	BORCS6	coord: 9..143 e-value: 1.7E-6 score: 28.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G05790.1	CSPI04G05790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane