CSPI04G05300 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G05300
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr4: 3624773 .. 3627216 (+)
RNA-Seq ExpressionCSPI04G05300
SyntenyCSPI04G05300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGATTTCATAAGTATCACAACGTATCCTACAACTAAAACGCACCGTTTCAGGGTGTATTGATGAACTATCAAAGTTGCCGGAGTAATTGACGAAGCTCCGCCTCCTCCTCCAATCCTACAACTGTCTAATGATCGGTTTCTCCCGCAACCTCTCCACTGTCTCCAAGCTTAGTCATTTACAGAACCTCCAAACACGGGCGTCGCCAAATTTCATTCCCTTTCCTCAGTTGCAACACCAGCGGAAGCTTTTAGAATGGCGACTCATGAGTATTCTTCACGACTGCACGCTCTTTTCTCAAATCAAGCAAGTCCATGCCCATATCATCCGCAACGGATTGAGTCAATGTTCTTACGTCCTCACCAAACTCATCCGCATGCTCACGAAGGTAGATGTCCCCATGGGTTCCTACCCACTTTTGGTTTTTGGACAGGTTAATTATCCCAACCCCTTTCTTTGGACTGCCATGATACGTGGATACGCGCTTCAAGGACTCTTGTCTGAATCTACTAACTTCTATACTAGAATGAGGAGGGATGGCGTCGGTCCTGTTTCGTTTACGTTTTCGGCGCTTTTTAAGGCATGTGGGGCTGCTCTTAATATGGATTTGGGTAAGCAGGTGCATGCCCAGACGATTTTGATTGGAGGATTTGCTTCTGATTTGTATGTAGGTAACTCGATGATTGATTTGTATGTGAAATGTGGGTTCTTGGGTTGTGCGCGGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTGGTTTCTTGGACTGAACTGATTGTTGCGTATGCGAAGTATGGGGATATGGAATCTGCTAGTGGTCTGTTTGATGATTTGCCTTTGAAGGATATGGTGGCATGGACGGCAATGGTCACGGGTTATGCCCAAAATGGCAGACCAAAAGAGGCATTGGAGTATTTTCAGAAAATGCAGGATGTAGGTATGGAGACCGACGAAGTTACACTGGCCGGTGTCATTTCAGCCTGTGCTCAGTTGGGCGCAGTTAAACATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGTTTTGGACCTTCTGGAAACGTAGTAGTGGGATCTGCTCTTATTGATATGTACTCTAAATGTGGCAGTCCTGATGAGGCATATAAGGTTTTTGAAGTAATGAAGGAAAGAAATGTATTTTCTTATAGTTCCATGATTTTGGGATATGCAATGCATGGTCGTGCTCATTCAGCTTTGCAGTTATTCCATGATATGTTAAAAACAGAAATCAGGCCAAATAAGGTTACTTTTATTGGGATACTTTCAGCCTGCAGCCATGCCGGTTTGGTTGAACAAGGCCGACAGCTATTCGCTAAGATGGAGAAGTTTTTCGGTGTTGCTCCGTCACCTGATCATTATGCATGTATGGTAGATCTCCTAGGTCGAGCTGGATGTTTGGAAGAAGCACTCGACCTCGTTAAAACCATGCCAACGGAACCTAATGGAGGTGTATGGGGAGCACTGCTTGGGGCTTGCCGGATCCATGGGAATCCTGACATTGCTCAAATAGCTGCGAACGAACTATTTAAGCTCGAACCAAATGGTATAGGGAACTACATTTTGCTATCGAACATATATGCATCAGCAGGAAGGTGGGAGGAAGTTTCGAAATTGAGGAAAGTAATTAGAGAAAAAGGCTTTAAGAAGAATCCGGGCTGCAGCTGGTTTGAAGGGAAGAATGGGGAAATTCACGATTTCTTTGCAGGTGATACAACTCATCCACGATCAAGTGAGATTAGACAAGCCTTGAAGCAACTAATTGAAAGATTAAGATCCCATGGATACAAACCAAACTTGGGCTCTGCTCCTTATGATTTGACTGATGATGAAAAGGAAAGAATACTGATGAGTCATAGTGAAAAGCTTGCATTGGCATATGGGCTGCTATGTACTGAAGCTGGTGATACCATTAAGATTATGAAAAACATTAGGATATGCGAGGATTGTCACAATGTCATGTGTGCTGCATCAGAGATCACAGGAAGGGAAATCATTGTAAGGGATAATATGAGATTTCATCACTTCCACAATGGGACTTGTTCATGTGGTAACTTTTGGTGAATCATGCGTTGACAGTCTCCTCATTCTCAACTGATTCCTTGCTGGGAGAAAACCATTGTTGAGAATCATTCTGCGTTATGCACTGTTGTGAGTATGAACAGTGAATGATGTAGAAGCCGTGATTCGGTTAGAACCACCAATCGAGGGCCCATAAGTTCATTCTGAAGCTTCAATTCATGGCGGCCTGGATACTTTAACGAGACATTCAATAACGATGTTTTGTTCTGTTTCTTTGTGTTCCTTCATGCTTGTGTTCACACAAAGTCTGGATTACTAACATTATTCTTTTTGTATTGCATCATAAAGATCAAAGAATTAGGCCATATCACTCATAGGAAGGCGATCAATTTAGTCTTTTACCC

mRNA sequence

GTGATTTCATAAGTATCACAACGTATCCTACAACTAAAACGCACCGTTTCAGGGTGTATTGATGAACTATCAAAGTTGCCGGAGTAATTGACGAAGCTCCGCCTCCTCCTCCAATCCTACAACTGTCTAATGATCGGTTTCTCCCGCAACCTCTCCACTGTCTCCAAGCTTAGTCATTTACAGAACCTCCAAACACGGGCGTCGCCAAATTTCATTCCCTTTCCTCAGTTGCAACACCAGCGGAAGCTTTTAGAATGGCGACTCATGAGTATTCTTCACGACTGCACGCTCTTTTCTCAAATCAAGCAAGTCCATGCCCATATCATCCGCAACGGATTGAGTCAATGTTCTTACGTCCTCACCAAACTCATCCGCATGCTCACGAAGGTAGATGTCCCCATGGGTTCCTACCCACTTTTGGTTTTTGGACAGGTTAATTATCCCAACCCCTTTCTTTGGACTGCCATGATACGTGGATACGCGCTTCAAGGACTCTTGTCTGAATCTACTAACTTCTATACTAGAATGAGGAGGGATGGCGTCGGTCCTGTTTCGTTTACGTTTTCGGCGCTTTTTAAGGCATGTGGGGCTGCTCTTAATATGGATTTGGGTAAGCAGGTGCATGCCCAGACGATTTTGATTGGAGGATTTGCTTCTGATTTGTATGTAGGTAACTCGATGATTGATTTGTATGTGAAATGTGGGTTCTTGGGTTGTGCGCGGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTGGTTTCTTGGACTGAACTGATTGTTGCGTATGCGAAGTATGGGGATATGGAATCTGCTAGTGGTCTGTTTGATGATTTGCCTTTGAAGGATATGGTGGCATGGACGGCAATGGTCACGGGTTATGCCCAAAATGGCAGACCAAAAGAGGCATTGGAGTATTTTCAGAAAATGCAGGATGTAGGTATGGAGACCGACGAAGTTACACTGGCCGGTGTCATTTCAGCCTGTGCTCAGTTGGGCGCAGTTAAACATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGTTTTGGACCTTCTGGAAACGTAGTAGTGGGATCTGCTCTTATTGATATGTACTCTAAATGTGGCAGTCCTGATGAGGCATATAAGGTTTTTGAAGTAATGAAGGAAAGAAATGTATTTTCTTATAGTTCCATGATTTTGGGATATGCAATGCATGGTCGTGCTCATTCAGCTTTGCAGTTATTCCATGATATGTTAAAAACAGAAATCAGGCCAAATAAGGTTACTTTTATTGGGATACTTTCAGCCTGCAGCCATGCCGGTTTGGTTGAACAAGGCCGACAGCTATTCGCTAAGATGGAGAAGTTTTTCGGTGTTGCTCCGTCACCTGATCATTATGCATGTATGGTAGATCTCCTAGGTCGAGCTGGATGTTTGGAAGAAGCACTCGACCTCGTTAAAACCATGCCAACGGAACCTAATGGAGGTGTATGGGGAGCACTGCTTGGGGCTTGCCGGATCCATGGGAATCCTGACATTGCTCAAATAGCTGCGAACGAACTATTTAAGCTCGAACCAAATGGTATAGGGAACTACATTTTGCTATCGAACATATATGCATCAGCAGGAAGGTGGGAGGAAGTTTCGAAATTGAGGAAAGTAATTAGAGAAAAAGGCTTTAAGAAGAATCCGGGCTGCAGCTGGTTTGAAGGGAAGAATGGGGAAATTCACGATTTCTTTGCAGGTGATACAACTCATCCACGATCAAGTGAGATTAGACAAGCCTTGAAGCAACTAATTGAAAGATTAAGATCCCATGGATACAAACCAAACTTGGGCTCTGCTCCTTATGATTTGACTGATGATGAAAAGGAAAGAATACTGATGAGTCATAGTGAAAAGCTTGCATTGGCATATGGGCTGCTATGTACTGAAGCTGGTGATACCATTAAGATTATGAAAAACATTAGGATATGCGAGGATTGTCACAATGTCATGTGTGCTGCATCAGAGATCACAGGAAGGGAAATCATTGTAAGGGATAATATGAGATTTCATCACTTCCACAATGGGACTTGTTCATGTGGTAACTTTTGGTGAATCATGCGTTGACAGTCTCCTCATTCTCAACTGATTCCTTGCTGGGAGAAAACCATTGTTGAGAATCATTCTGCGTTATGCACTGTTGTGAGTATGAACAGTGAATGATGTAGAAGCCGTGATTCGGTTAGAACCACCAATCGAGGGCCCATAAGTTCATTCTGAAGCTTCAATTCATGGCGGCCTGGATACTTTAACGAGACATTCAATAACGATGTTTTGTTCTGTTTCTTTGTGTTCCTTCATGCTTGTGTTCACACAAAGTCTGGATTACTAACATTATTCTTTTTGTATTGCATCATAAAGATCAAAGAATTAGGCCATATCACTCATAGGAAGGCGATCAATTTAGTCTTTTACCC

Coding sequence (CDS)

ATGATCGGTTTCTCCCGCAACCTCTCCACTGTCTCCAAGCTTAGTCATTTACAGAACCTCCAAACACGGGCGTCGCCAAATTTCATTCCCTTTCCTCAGTTGCAACACCAGCGGAAGCTTTTAGAATGGCGACTCATGAGTATTCTTCACGACTGCACGCTCTTTTCTCAAATCAAGCAAGTCCATGCCCATATCATCCGCAACGGATTGAGTCAATGTTCTTACGTCCTCACCAAACTCATCCGCATGCTCACGAAGGTAGATGTCCCCATGGGTTCCTACCCACTTTTGGTTTTTGGACAGGTTAATTATCCCAACCCCTTTCTTTGGACTGCCATGATACGTGGATACGCGCTTCAAGGACTCTTGTCTGAATCTACTAACTTCTATACTAGAATGAGGAGGGATGGCGTCGGTCCTGTTTCGTTTACGTTTTCGGCGCTTTTTAAGGCATGTGGGGCTGCTCTTAATATGGATTTGGGTAAGCAGGTGCATGCCCAGACGATTTTGATTGGAGGATTTGCTTCTGATTTGTATGTAGGTAACTCGATGATTGATTTGTATGTGAAATGTGGGTTCTTGGGTTGTGCGCGGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTGGTTTCTTGGACTGAACTGATTGTTGCGTATGCGAAGTATGGGGATATGGAATCTGCTAGTGGTCTGTTTGATGATTTGCCTTTGAAGGATATGGTGGCATGGACGGCAATGGTCACGGGTTATGCCCAAAATGGCAGACCAAAAGAGGCATTGGAGTATTTTCAGAAAATGCAGGATGTAGGTATGGAGACCGACGAAGTTACACTGGCCGGTGTCATTTCAGCCTGTGCTCAGTTGGGCGCAGTTAAACATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGTTTTGGACCTTCTGGAAACGTAGTAGTGGGATCTGCTCTTATTGATATGTACTCTAAATGTGGCAGTCCTGATGAGGCATATAAGGTTTTTGAAGTAATGAAGGAAAGAAATGTATTTTCTTATAGTTCCATGATTTTGGGATATGCAATGCATGGTCGTGCTCATTCAGCTTTGCAGTTATTCCATGATATGTTAAAAACAGAAATCAGGCCAAATAAGGTTACTTTTATTGGGATACTTTCAGCCTGCAGCCATGCCGGTTTGGTTGAACAAGGCCGACAGCTATTCGCTAAGATGGAGAAGTTTTTCGGTGTTGCTCCGTCACCTGATCATTATGCATGTATGGTAGATCTCCTAGGTCGAGCTGGATGTTTGGAAGAAGCACTCGACCTCGTTAAAACCATGCCAACGGAACCTAATGGAGGTGTATGGGGAGCACTGCTTGGGGCTTGCCGGATCCATGGGAATCCTGACATTGCTCAAATAGCTGCGAACGAACTATTTAAGCTCGAACCAAATGGTATAGGGAACTACATTTTGCTATCGAACATATATGCATCAGCAGGAAGGTGGGAGGAAGTTTCGAAATTGAGGAAAGTAATTAGAGAAAAAGGCTTTAAGAAGAATCCGGGCTGCAGCTGGTTTGAAGGGAAGAATGGGGAAATTCACGATTTCTTTGCAGGTGATACAACTCATCCACGATCAAGTGAGATTAGACAAGCCTTGAAGCAACTAATTGAAAGATTAAGATCCCATGGATACAAACCAAACTTGGGCTCTGCTCCTTATGATTTGACTGATGATGAAAAGGAAAGAATACTGATGAGTCATAGTGAAAAGCTTGCATTGGCATATGGGCTGCTATGTACTGAAGCTGGTGATACCATTAAGATTATGAAAAACATTAGGATATGCGAGGATTGTCACAATGTCATGTGTGCTGCATCAGAGATCACAGGAAGGGAAATCATTGTAAGGGATAATATGAGATTTCATCACTTCCACAATGGGACTTGTTCATGTGGTAACTTTTGGTGA

Protein sequence

MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW*
Homology
[Close]
BLAST of CSPI04G05300 vs. ExPASy Swiss-Prot
Match: Q9FFG8 (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 797.3 bits (2058), Expect = 1.3e-229
Identity = 387/646 (59.91%), Postives = 487/646 (75.39%), Query Frame = 0 

Query: 7   NLSTVSKLSHLQNLQT-RASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHI 66
           N+S +SK    Q LQ  R S N   F ++ +Q++LL   L+S L DC   +QIKQ+H H+
Sbjct: 17  NISLLSK----QLLQLGRTSNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHV 76

Query: 67  IRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSE 126
           +R GL Q  Y+LTKLIR LTK+ VPM  Y   V   V + NPFLWTA+IRGYA++G   E
Sbjct: 77  LRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDE 136

Query: 127 STNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMI 186
           +   Y  MR++ + PVSFTFSAL KACG   +++LG+Q HAQT  + GF   +YVGN+MI
Sbjct: 137 AIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMI 196

Query: 187 DLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTA 246
           D+YVKC  + CARKVFDEM ERDV+SWTELI AYA+ G+ME A+ LF+ LP KDMVAWTA
Sbjct: 197 DMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTA 256

Query: 247 MVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSG 306
           MVTG+AQN +P+EALEYF +M+  G+  DEVT+AG ISACAQLGA K+A+    IA++SG
Sbjct: 257 MVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSG 316

Query: 307 FGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQL 366
           + PS +VV+GSALIDMYSKCG+ +EA  VF  M  +NVF+YSSMILG A HGRA  AL L
Sbjct: 317 YSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHL 376

Query: 367 FHDML-KTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLL 426
           FH M+ +TEI+PN VTF+G L ACSH+GLV+QGRQ+F  M + FGV P+ DHY CMVDLL
Sbjct: 377 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLL 436

Query: 427 GRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYI 486
           GR G L+EAL+L+KTM  EP+GGVWGALLGACRIH NP+IA+IAA  LF+LEP+ IGNYI
Sbjct: 437 GRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYI 496

Query: 487 LLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIR 546
           LLSN+YASAG W  V ++RK+I+EKG KK P  SW   KNG++H FF G+  HP S++I+
Sbjct: 497 LLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQ 556

Query: 547 QALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIM 606
             L++L+ERL   GY+P+L S PYD++D+ K  IL+ H+EKLALA+ LL T    TI IM
Sbjct: 557 DKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIM 616

Query: 607 KNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           KN+R+C DCH  M  ASE+TG+ II+RDNMRFHHF +G CSCG+FW
Sbjct: 617 KNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657

[Close]
BLAST of CSPI04G05300 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 4.4e-142
Identity = 242/611 (39.61%), Postives = 384/611 (62.85%), Query Frame = 0 

Query: 46  MSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLT-----KVDVPMGSYPLLVFG 105
           +++L  C+ FS +K +H  ++R  L    +V ++L+ +            +  Y   +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 106 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDL 165
           Q+  PN F++  +IR ++     S++  FYT+M +  + P + TF  L KA      + +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 166 GKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYA 225
           G+Q H+Q +   GF +D+YV NS++ +Y  CGF+  A ++F +M  RDVVSWT ++  Y 
Sbjct: 136 GEQTHSQIVRF-GFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 195

Query: 226 KYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 285
           K G +E+A  +FD++P +++  W+ M+ GYA+N   ++A++ F+ M+  G+  +E  +  
Sbjct: 196 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 255

Query: 286 VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE 345
           VIS+CA LGA++      +   +S    + N+++G+AL+DM+ +CG  ++A  VFE + E
Sbjct: 256 VISSCAHLGALEFGERAYEYVVKSHM--TVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 315

Query: 346 RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 405
            +  S+SS+I G A+HG AH A+  F  M+     P  VTF  +LSACSH GLVE+G ++
Sbjct: 316 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 375

Query: 406 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHG 465
           +  M+K  G+ P  +HY C+VD+LGRAG L EA + +  M  +PN  + GALLGAC+I+ 
Sbjct: 376 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 435

Query: 466 NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 525
           N ++A+   N L K++P   G Y+LLSNIYA AG+W+++  LR +++EK  KK PG S  
Sbjct: 436 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 495

Query: 526 EGKNGEIHDFFAG-DTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERIL 585
           E  +G+I+ F  G D  HP   +IR+  ++++ ++R  GYK N G A +D+ ++EKE  +
Sbjct: 496 E-IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSI 555

Query: 586 MSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHF 645
             HSEKLA+AYG++ T+ G TI+I+KN+R+CEDCH V    SE+ GRE+IVRD  RFHHF
Sbjct: 556 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 615

Query: 646 HNGTCSCGNFW 651
            NG CSC ++W
Sbjct: 616 RNGVCSCRDYW 622

[Close]
BLAST of CSPI04G05300 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 3.5e-139
Identity = 235/555 (42.34%), Postives = 353/555 (63.60%), Query Frame = 0 

Query: 98  VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
           VF  +   +   W +MI G+  +G   ++   + +M  + V     T   +  AC    N
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247

Query: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
           ++ G+QV    I       +L + N+M+D+Y KCG +  A+++FD M E+D V+WT ++ 
Sbjct: 248 LEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 307

Query: 218 AYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ-DVGMETDEV 277
            YA   D E+A  + + +P KD+VAW A+++ Y QNG+P EAL  F ++Q    M+ +++
Sbjct: 308 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 367

Query: 278 TLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 337
           TL   +SACAQ+GA++   WI    ++ G     N  V SALI MYSKCG  +++ +VF 
Sbjct: 368 TLVSTLSACAQVGALELGRWIHSYIKKHGI--RMNFHVTSALIHMYSKCGDLEKSREVFN 427

Query: 338 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQ 397
            +++R+VF +S+MI G AMHG  + A+ +F+ M +  ++PN VTF  +  ACSH GLV++
Sbjct: 428 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 487

Query: 398 GRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGAC 457
              LF +ME  +G+ P   HYAC+VD+LGR+G LE+A+  ++ MP  P+  VWGALLGAC
Sbjct: 488 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 547

Query: 458 RIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPG 517
           +IH N ++A++A   L +LEP   G ++LLSNIYA  G+WE VS+LRK +R  G KK PG
Sbjct: 548 KIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPG 607

Query: 518 CSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDE-K 577
           CS  E  +G IH+F +GD  HP S ++   L +++E+L+S+GY+P +      + ++E K
Sbjct: 608 CSSIE-IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMK 667

Query: 578 ERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMR 637
           E+ L  HSEKLA+ YGL+ TEA   I+++KN+R+C DCH+V    S++  REIIVRD  R
Sbjct: 668 EQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYR 727

Query: 638 FHHFHNGTCSCGNFW 651
           FHHF NG CSC +FW
Sbjct: 728 FHHFRNGQCSCNDFW 738

[Close]
BLAST of CSPI04G05300 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 3.5e-139
Identity = 242/610 (39.67%), Postives = 367/610 (60.16%), Query Frame = 0 

Query: 43  WRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRM-LTKVDVPMGSYPLLVFGQ 102
           +  MS L  C+   ++KQ+HA +++ GL Q SY +TK +   ++        Y  +VF  
Sbjct: 15  YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74

Query: 103 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 162
            + P+ FLW  MIRG++       S   Y RM        ++TF +L KAC      +  
Sbjct: 75  FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134

Query: 163 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 222
            Q+HAQ   + G+ +D+Y  NS+I+ Y   G    A  +FD + E D VSW  +I  Y K
Sbjct: 135 TQIHAQITKL-GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 194

Query: 223 YGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 282
            G M+ A  LF  +  K+ ++WT M++GY Q    KEAL+ F +MQ+  +E D V+LA  
Sbjct: 195 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 254

Query: 283 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 342
           +SACAQLGA++   WI     ++        V+G  LIDMY+KCG  +EA +VF+ +K++
Sbjct: 255 LSACAQLGALEQGKWIHSYLNKTRIRMDS--VLGCVLIDMYAKCGEMEEALEVFKNIKKK 314

Query: 343 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 402
           +V +++++I GYA HG    A+  F +M K  I+PN +TF  +L+ACS+ GLVE+G+ +F
Sbjct: 315 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 374

Query: 403 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGN 462
             ME+ + + P+ +HY C+VDLLGRAG L+EA   ++ MP +PN  +WGALL ACRIH N
Sbjct: 375 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 434

Query: 463 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 522
            ++ +     L  ++P   G Y+  +NI+A   +W++ ++ R++++E+G  K PGCS   
Sbjct: 435 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI- 494

Query: 523 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLT-DDEKERILM 582
              G  H+F AGD +HP   +I+   + +  +L  +GY P L     DL  DDE+E I+ 
Sbjct: 495 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 554

Query: 583 SHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFH 642
            HSEKLA+ YGL+ T+ G  I+IMKN+R+C+DCH V    S+I  R+I++RD  RFHHF 
Sbjct: 555 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 614

Query: 643 NGTCSCGNFW 651
           +G CSCG++W
Sbjct: 615 DGKCSCGDYW 620

[Close]
BLAST of CSPI04G05300 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 1.5e-137
Identity = 251/597 (42.04%), Postives = 372/597 (62.31%), Query Frame = 0 

Query: 57  QIKQVHAHIIR-NGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIR 116
           ++ Q+HA I+R N L    Y +  L             + L +F Q   P+ FL+TA I 
Sbjct: 44  EVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAIN 103

Query: 117 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 176
             ++ GL  ++   Y ++    + P  FTFS+L K+C    +   GK +H   +L  G  
Sbjct: 104 TASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTH-VLKFGLG 163

Query: 177 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 236
            D YV   ++D+Y K G +  A+KVFD M ER +VS T +I  YAK G++E+A  LFD +
Sbjct: 164 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 223

Query: 237 PLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM-ETDEVTLAGVISACAQLGAVKHA 296
             +D+V+W  M+ GYAQ+G P +AL  FQK+   G  + DE+T+   +SAC+Q+GA++  
Sbjct: 224 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 283

Query: 297 NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYA 356
            WI    + S      NV V + LIDMYSKCGS +EA  VF     +++ ++++MI GYA
Sbjct: 284 RWIHVFVKSSRI--RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA 343

Query: 357 MHGRAHSALQLFHDMLK-TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 416
           MHG +  AL+LF++M   T ++P  +TFIG L AC+HAGLV +G ++F  M + +G+ P 
Sbjct: 344 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 403

Query: 417 PDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELF 476
            +HY C+V LLGRAG L+ A + +K M  + +  +W ++LG+C++HG+  + +  A  L 
Sbjct: 404 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 463

Query: 477 KLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAG 536
            L     G Y+LLSNIYAS G +E V+K+R +++EKG  K PG S  E +N ++H+F AG
Sbjct: 464 GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN-KVHEFRAG 523

Query: 537 DTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLL 596
           D  H +S EI   L+++ ER++SHGY PN  +   DL + EKE+ L  HSE+LA+AYGL+
Sbjct: 524 DREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLI 583

Query: 597 CTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
            T+ G  +KI KN+R+C DCH V    S+ITGR+I++RD  RFHHF +G+CSCG+FW
Sbjct: 584 STKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

[Close]
BLAST of CSPI04G05300 vs. ExPASy TrEMBL
Match: A0A0A0KUQ8 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G045030 PE=3 SV=1)

HSP 1 Score: 1340.1 bits (3467), Expect = 0.0e+00
Identity = 648/650 (99.69%), Postives = 648/650 (99.69%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQTR SPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 1   MIGFSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI
Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH
Sbjct: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM
Sbjct: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMP EPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI
Sbjct: 421 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT
Sbjct: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650

[Close]
BLAST of CSPI04G05300 vs. ExPASy TrEMBL
Match: A0A5D3CXQ6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005150 PE=3 SV=1)

HSP 1 Score: 1303.9 bits (3373), Expect = 0.0e+00
Identity = 627/650 (96.46%), Postives = 637/650 (98.00%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQT ASPN IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 14  MIGFSRNLSTVSKLSHLQNLQTPASPNIIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 73

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 74  VHGHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 133

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GL+SESTNFYTRMRRDGVGPVSFTFSALFKACGA+LNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 134 GLVSESTNFYTRMRRDGVGPVSFTFSALFKACGASLNMDLGKQVHAQTILIGGFASDLYV 193

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 194 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 253

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI
Sbjct: 254 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 313

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 
Sbjct: 314 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAR 373

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTF+G+LSACSHAGLVEQGRQ+FAKMEKFFGVAPSPDHYACM
Sbjct: 374 SALQLFHEMLKTEIRPNKVTFLGVLSACSHAGLVEQGRQVFAKMEKFFGVAPSPDHYACM 433

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMP EPNGGVWGALLGACRIHGNPDIAQIAAN+LF LEPN I
Sbjct: 434 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANQLFNLEPNSI 493

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKG KKNPGCSWFEGKNGEIHDFFAGDTTH RS
Sbjct: 494 GNYILLSNIYASAGRWEEVSKLRKVIREKGLKKNPGCSWFEGKNGEIHDFFAGDTTHSRS 553

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLR+HGYKPNL SAPYD+TDDEKERILMSHSEKLALAYGLLCT AGDT
Sbjct: 554 SEIRQALKQLIERLRAHGYKPNLSSAPYDMTDDEKERILMSHSEKLALAYGLLCTSAGDT 613

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREII+RDNMRFHHFH GTCSCGNFW
Sbjct: 614 IKIMKNIRICEDCHNVMCAASEITGREIIIRDNMRFHHFHKGTCSCGNFW 663

[Close]
BLAST of CSPI04G05300 vs. ExPASy TrEMBL
Match: A0A1S3BU85 (pentatricopeptide repeat-containing protein At5g44230 OS=Cucumis melo OX=3656 GN=LOC103493215 PE=3 SV=1)

HSP 1 Score: 1303.9 bits (3373), Expect = 0.0e+00
Identity = 627/650 (96.46%), Postives = 637/650 (98.00%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQT ASPN IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 14  MIGFSRNLSTVSKLSHLQNLQTPASPNIIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 73

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 74  VHGHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 133

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GL+SESTNFYTRMRRDGVGPVSFTFSALFKACGA+LNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 134 GLVSESTNFYTRMRRDGVGPVSFTFSALFKACGASLNMDLGKQVHAQTILIGGFASDLYV 193

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 194 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 253

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI
Sbjct: 254 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 313

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 
Sbjct: 314 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAR 373

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTF+G+LSACSHAGLVEQGRQ+FAKMEKFFGVAPSPDHYACM
Sbjct: 374 SALQLFHEMLKTEIRPNKVTFLGVLSACSHAGLVEQGRQVFAKMEKFFGVAPSPDHYACM 433

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMP EPNGGVWGALLGACRIHGNPDIAQIAAN+LF LEPN I
Sbjct: 434 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANQLFNLEPNSI 493

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKG KKNPGCSWFEGKNGEIHDFFAGDTTH RS
Sbjct: 494 GNYILLSNIYASAGRWEEVSKLRKVIREKGLKKNPGCSWFEGKNGEIHDFFAGDTTHSRS 553

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLR+HGYKPNL SAPYD+TDDEKERILMSHSEKLALAYGLLCT AGDT
Sbjct: 554 SEIRQALKQLIERLRAHGYKPNLSSAPYDMTDDEKERILMSHSEKLALAYGLLCTSAGDT 613

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREII+RDNMRFHHFH GTCSCGNFW
Sbjct: 614 IKIMKNIRICEDCHNVMCAASEITGREIIIRDNMRFHHFHKGTCSCGNFW 663

[Close]
BLAST of CSPI04G05300 vs. ExPASy TrEMBL
Match: A0A5A7TN81 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00720 PE=3 SV=1)

HSP 1 Score: 1302.3 bits (3369), Expect = 0.0e+00
Identity = 626/650 (96.31%), Postives = 636/650 (97.85%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQT ASPN IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 14  MIGFSRNLSTVSKLSHLQNLQTPASPNIIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 73

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 74  VHGHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 133

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GL+SESTNFYTRMRRDGVGPVSFTFSALFKACGA+LNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 134 GLVSESTNFYTRMRRDGVGPVSFTFSALFKACGASLNMDLGKQVHAQTILIGGFASDLYV 193

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 194 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 253

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVGMETDEVTL GVISACAQLGAVKHANWIRDI
Sbjct: 254 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLVGVISACAQLGAVKHANWIRDI 313

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 
Sbjct: 314 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAR 373

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTF+G+LSACSHAGLVEQGRQ+FAKMEKFFGVAPSPDHYACM
Sbjct: 374 SALQLFHEMLKTEIRPNKVTFLGVLSACSHAGLVEQGRQVFAKMEKFFGVAPSPDHYACM 433

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMP EPNGGVWGALLGACRIHGNPDIAQIAAN+LF LEPN I
Sbjct: 434 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANQLFNLEPNSI 493

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKG KKNPGCSWFEGKNGEIHDFFAGDTTH RS
Sbjct: 494 GNYILLSNIYASAGRWEEVSKLRKVIREKGLKKNPGCSWFEGKNGEIHDFFAGDTTHSRS 553

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLR+HGYKPNL SAPYD+TDDEKERILMSHSEKLALAYGLLCT AGDT
Sbjct: 554 SEIRQALKQLIERLRAHGYKPNLSSAPYDMTDDEKERILMSHSEKLALAYGLLCTSAGDT 613

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREII+RDNMRFHHFH GTCSCGNFW
Sbjct: 614 IKIMKNIRICEDCHNVMCAASEITGREIIIRDNMRFHHFHKGTCSCGNFW 663

[Close]
BLAST of CSPI04G05300 vs. ExPASy TrEMBL
Match: A0A6J1C512 (pentatricopeptide repeat-containing protein At5g44230 OS=Momordica charantia OX=3673 GN=LOC111008431 PE=3 SV=1)

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 565/650 (86.92%), Postives = 614/650 (94.46%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIG SRN STVSKLSHLQ LQT+A+PNF+PF QLQ QRKLLEWRL++ILHDCT FSQIK+
Sbjct: 1   MIGLSRNFSTVSKLSHLQQLQTQATPNFVPFSQLQQQRKLLEWRLIAILHDCTHFSQIKE 60

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HIIRNGL QC YVLTKLIRMLTK+DVPM S+P LVF QV YPNPFLWTAMIRGYALQ
Sbjct: 61  VHGHIIRNGLGQCCYVLTKLIRMLTKIDVPMDSFPSLVFQQVKYPNPFLWTAMIRGYALQ 120

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           G  SES N YTRMRRDGV PVSFTFSALFKACGA L++ LG+QVHAQTILIGGFASDLYV
Sbjct: 121 GPFSESVNLYTRMRRDGVSPVSFTFSALFKACGAVLDLGLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GN+MID+YVKCGFL C RKVFDEMSERDVVSWTELIVAYAK+GDMESASGLFD LP+KDM
Sbjct: 181 GNTMIDMYVKCGFLSCGRKVFDEMSERDVVSWTELIVAYAKFGDMESASGLFDGLPVKDM 240

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVGMETDEVTL GV+SACAQLGA+K+ANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLVGVVSACAQLGAIKYANWIRDI 300

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AE+SGFGPS NVVVGSALIDMYSKCGSPDEA+KVFE M+ERNVFSYSSMI+GYAMHGRAH
Sbjct: 301 AEKSGFGPSENVVVGSALIDMYSKCGSPDEAHKVFEGMQERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTFIG+L+ACSHAG+VEQGRQLFAKMEK+F VAPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLTACSHAGMVEQGRQLFAKMEKYFSVAPSPDHYACM 420

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEAL+L++TMP +P+GGVWGALLGACRIHGNPDIAQ+AA++LF+LEP+GI
Sbjct: 421 VDLLGRAGCLEEALELIETMPMDPHGGVWGALLGACRIHGNPDIAQLAASQLFELEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLR+V+REKG KKNPGCSWFEGK GEIH+FFAGDTTHPRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRRVMREKGLKKNPGCSWFEGKKGEIHEFFAGDTTHPRS 540

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           +EI+QAL+ L+ERLR+HGYKPNL S PYDLTDDEK+RILMSHSEKLALAYGLL T+AGDT
Sbjct: 541 NEIKQALEHLLERLRAHGYKPNLSSVPYDLTDDEKKRILMSHSEKLALAYGLLSTDAGDT 600

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKN+RICEDCH VMCAASEITGREII+RDNMRFHHFHNGTCSCGNFW
Sbjct: 601 IKIMKNLRICEDCHTVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]
BLAST of CSPI04G05300 vs. NCBI nr
Match: XP_004146494.1 (pentatricopeptide repeat-containing protein At5g44230 [Cucumis sativus] >KGN53288.1 hypothetical protein Csa_014416 [Cucumis sativus])

HSP 1 Score: 1340.1 bits (3467), Expect = 0.0e+00
Identity = 648/650 (99.69%), Postives = 648/650 (99.69%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQTR SPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 1   MIGFSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI
Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH
Sbjct: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM
Sbjct: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMP EPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI
Sbjct: 421 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT
Sbjct: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650

[Close]
BLAST of CSPI04G05300 vs. NCBI nr
Match: XP_008452110.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Cucumis melo] >TYK16683.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1303.9 bits (3373), Expect = 0.0e+00
Identity = 627/650 (96.46%), Postives = 637/650 (98.00%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQT ASPN IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 14  MIGFSRNLSTVSKLSHLQNLQTPASPNIIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 73

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 74  VHGHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 133

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GL+SESTNFYTRMRRDGVGPVSFTFSALFKACGA+LNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 134 GLVSESTNFYTRMRRDGVGPVSFTFSALFKACGASLNMDLGKQVHAQTILIGGFASDLYV 193

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 194 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 253

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI
Sbjct: 254 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 313

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 
Sbjct: 314 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAR 373

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTF+G+LSACSHAGLVEQGRQ+FAKMEKFFGVAPSPDHYACM
Sbjct: 374 SALQLFHEMLKTEIRPNKVTFLGVLSACSHAGLVEQGRQVFAKMEKFFGVAPSPDHYACM 433

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMP EPNGGVWGALLGACRIHGNPDIAQIAAN+LF LEPN I
Sbjct: 434 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANQLFNLEPNSI 493

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKG KKNPGCSWFEGKNGEIHDFFAGDTTH RS
Sbjct: 494 GNYILLSNIYASAGRWEEVSKLRKVIREKGLKKNPGCSWFEGKNGEIHDFFAGDTTHSRS 553

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLR+HGYKPNL SAPYD+TDDEKERILMSHSEKLALAYGLLCT AGDT
Sbjct: 554 SEIRQALKQLIERLRAHGYKPNLSSAPYDMTDDEKERILMSHSEKLALAYGLLCTSAGDT 613

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREII+RDNMRFHHFH GTCSCGNFW
Sbjct: 614 IKIMKNIRICEDCHNVMCAASEITGREIIIRDNMRFHHFHKGTCSCGNFW 663

[Close]
BLAST of CSPI04G05300 vs. NCBI nr
Match: KAA0044782.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1302.3 bits (3369), Expect = 0.0e+00
Identity = 626/650 (96.31%), Postives = 636/650 (97.85%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIGFSRNLSTVSKLSHLQNLQT ASPN IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ
Sbjct: 14  MIGFSRNLSTVSKLSHLQNLQTPASPNIIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 73

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 74  VHGHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 133

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           GL+SESTNFYTRMRRDGVGPVSFTFSALFKACGA+LNMDLGKQVHAQTILIGGFASDLYV
Sbjct: 134 GLVSESTNFYTRMRRDGVGPVSFTFSALFKACGASLNMDLGKQVHAQTILIGGFASDLYV 193

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM
Sbjct: 194 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 253

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVGMETDEVTL GVISACAQLGAVKHANWIRDI
Sbjct: 254 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLVGVISACAQLGAVKHANWIRDI 313

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 
Sbjct: 314 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAR 373

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTF+G+LSACSHAGLVEQGRQ+FAKMEKFFGVAPSPDHYACM
Sbjct: 374 SALQLFHEMLKTEIRPNKVTFLGVLSACSHAGLVEQGRQVFAKMEKFFGVAPSPDHYACM 433

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEALDLVKTMP EPNGGVWGALLGACRIHGNPDIAQIAAN+LF LEPN I
Sbjct: 434 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANQLFNLEPNSI 493

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIREKG KKNPGCSWFEGKNGEIHDFFAGDTTH RS
Sbjct: 494 GNYILLSNIYASAGRWEEVSKLRKVIREKGLKKNPGCSWFEGKNGEIHDFFAGDTTHSRS 553

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEIRQALKQLIERLR+HGYKPNL SAPYD+TDDEKERILMSHSEKLALAYGLLCT AGDT
Sbjct: 554 SEIRQALKQLIERLRAHGYKPNLSSAPYDMTDDEKERILMSHSEKLALAYGLLCTSAGDT 613

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKNIRICEDCHNVMCAASEITGREII+RDNMRFHHFH GTCSCGNFW
Sbjct: 614 IKIMKNIRICEDCHNVMCAASEITGREIIIRDNMRFHHFHKGTCSCGNFW 663

[Close]
BLAST of CSPI04G05300 vs. NCBI nr
Match: XP_022136825.1 (pentatricopeptide repeat-containing protein At5g44230 [Momordica charantia])

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 565/650 (86.92%), Postives = 614/650 (94.46%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIG SRN STVSKLSHLQ LQT+A+PNF+PF QLQ QRKLLEWRL++ILHDCT FSQIK+
Sbjct: 1   MIGLSRNFSTVSKLSHLQQLQTQATPNFVPFSQLQQQRKLLEWRLIAILHDCTHFSQIKE 60

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HIIRNGL QC YVLTKLIRMLTK+DVPM S+P LVF QV YPNPFLWTAMIRGYALQ
Sbjct: 61  VHGHIIRNGLGQCCYVLTKLIRMLTKIDVPMDSFPSLVFQQVKYPNPFLWTAMIRGYALQ 120

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           G  SES N YTRMRRDGV PVSFTFSALFKACGA L++ LG+QVHAQTILIGGFASDLYV
Sbjct: 121 GPFSESVNLYTRMRRDGVSPVSFTFSALFKACGAVLDLGLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GN+MID+YVKCGFL C RKVFDEMSERDVVSWTELIVAYAK+GDMESASGLFD LP+KDM
Sbjct: 181 GNTMIDMYVKCGFLSCGRKVFDEMSERDVVSWTELIVAYAKFGDMESASGLFDGLPVKDM 240

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVGMETDEVTL GV+SACAQLGA+K+ANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLVGVVSACAQLGAIKYANWIRDI 300

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AE+SGFGPS NVVVGSALIDMYSKCGSPDEA+KVFE M+ERNVFSYSSMI+GYAMHGRAH
Sbjct: 301 AEKSGFGPSENVVVGSALIDMYSKCGSPDEAHKVFEGMQERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTFIG+L+ACSHAG+VEQGRQLFAKMEK+F VAPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLTACSHAGMVEQGRQLFAKMEKYFSVAPSPDHYACM 420

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCLEEAL+L++TMP +P+GGVWGALLGACRIHGNPDIAQ+AA++LF+LEP+GI
Sbjct: 421 VDLLGRAGCLEEALELIETMPMDPHGGVWGALLGACRIHGNPDIAQLAASQLFELEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNIYASAGRWEEVSKLR+V+REKG KKNPGCSWFEGK GEIH+FFAGDTTHPRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRRVMREKGLKKNPGCSWFEGKKGEIHEFFAGDTTHPRS 540

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           +EI+QAL+ L+ERLR+HGYKPNL S PYDLTDDEK+RILMSHSEKLALAYGLL T+AGDT
Sbjct: 541 NEIKQALEHLLERLRAHGYKPNLSSVPYDLTDDEKKRILMSHSEKLALAYGLLSTDAGDT 600

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKN+RICEDCH VMCAASEITGREII+RDNMRFHHFHNGTCSCGNFW
Sbjct: 601 IKIMKNLRICEDCHTVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]
BLAST of CSPI04G05300 vs. NCBI nr
Match: XP_038874627.1 (pentatricopeptide repeat-containing protein At5g44230 [Benincasa hispida])

HSP 1 Score: 1192.6 bits (3084), Expect = 0.0e+00
Identity = 566/650 (87.08%), Postives = 610/650 (93.85%), Query Frame = 0 

Query: 1   MIGFSRNLSTVSKLSHLQNLQTRASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60
           MIG SRNLSTV+K S++++LQT A+PNFIPF QLQ QRKLLEWRL+SILHDCT+FSQIKQ
Sbjct: 1   MIGLSRNLSTVAKHSYIRSLQTPATPNFIPFSQLQQQRKLLEWRLISILHDCTVFSQIKQ 60

Query: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH HI+ NGLSQCSYVL KLIRMLT++DVPM SYP LVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHGHIVSNGLSQCSYVLAKLIRMLTRIDVPMDSYPCLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
           G LSES N YTRMRRDGV PVSFTFSALFKACGAALN+DLGKQVHAQTILIGGFASDLYV
Sbjct: 121 GPLSESINMYTRMRRDGVSPVSFTFSALFKACGAALNLDLGKQVHAQTILIGGFASDLYV 180

Query: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240
           GN+M+D+YVKCG LGC RKVFDEMSERDV+SWT+LIVAYAK+GDMESAS LFD  PLKDM
Sbjct: 181 GNTMLDMYVKCGLLGCGRKVFDEMSERDVISWTQLIVAYAKFGDMESASDLFDGFPLKDM 240

Query: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300
           VAWTAMVTGYAQN +PKEALEYFQKMQDVGMETDEVTL GVISACAQLGAVK+ANWIRDI
Sbjct: 241 VAWTAMVTGYAQNAKPKEALEYFQKMQDVGMETDEVTLVGVISACAQLGAVKYANWIRDI 300

Query: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360
           AERSGFGPS +VVVGSALIDMYSKCGSPDEAYKVFE MKERNVFSY+SMI+GYAMHGR  
Sbjct: 301 AERSGFGPSESVVVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYTSMIVGYAMHGRGP 360

Query: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420
           SALQLFH+MLKTEIRPN+VTFIG+LSACSHAGLVEQGRQLFA+MEKFF VAPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNEVTFIGVLSACSHAGLVEQGRQLFARMEKFFCVAPSPDHYACM 420

Query: 421 VDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480
           VDLLGRAGCL+EAL+L++TMP EP+ GVWGALLGACRIHGNP IAQIAAN+LF+LEP+GI
Sbjct: 421 VDLLGRAGCLDEALELIETMPMEPHAGVWGALLGACRIHGNPGIAQIAANQLFELEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540
           GNYILLSNI ASAGRWEEVSKLRKVIREKG KK PGCSWFEGK GEI +FFAGDTTHPRS
Sbjct: 481 GNYILLSNICASAGRWEEVSKLRKVIREKGSKKTPGCSWFEGKKGEIDEFFAGDTTHPRS 540

Query: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600
           SEI QALKQL++RLR+HGYKPNL S PYDL+DDEKERILM HSEKLALAY LLCT+AGDT
Sbjct: 541 SEITQALKQLLKRLRAHGYKPNLSSVPYDLSDDEKERILMGHSEKLALAYALLCTDAGDT 600

Query: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           IKIMKN+RICEDCH VMCAASE+TGREII+RDNMRFHHFHNGTCSCGNFW
Sbjct: 601 IKIMKNLRICEDCHYVMCAASEVTGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]
BLAST of CSPI04G05300 vs. TAIR 10
Match: AT5G44230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 797.3 bits (2058), Expect = 8.9e-231
Identity = 387/646 (59.91%), Postives = 487/646 (75.39%), Query Frame = 0 

Query: 7   NLSTVSKLSHLQNLQT-RASPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHI 66
           N+S +SK    Q LQ  R S N   F ++ +Q++LL   L+S L DC   +QIKQ+H H+
Sbjct: 17  NISLLSK----QLLQLGRTSNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHV 76

Query: 67  IRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSE 126
           +R GL Q  Y+LTKLIR LTK+ VPM  Y   V   V + NPFLWTA+IRGYA++G   E
Sbjct: 77  LRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDE 136

Query: 127 STNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMI 186
           +   Y  MR++ + PVSFTFSAL KACG   +++LG+Q HAQT  + GF   +YVGN+MI
Sbjct: 137 AIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMI 196

Query: 187 DLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTA 246
           D+YVKC  + CARKVFDEM ERDV+SWTELI AYA+ G+ME A+ LF+ LP KDMVAWTA
Sbjct: 197 DMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTA 256

Query: 247 MVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSG 306
           MVTG+AQN +P+EALEYF +M+  G+  DEVT+AG ISACAQLGA K+A+    IA++SG
Sbjct: 257 MVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSG 316

Query: 307 FGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQL 366
           + PS +VV+GSALIDMYSKCG+ +EA  VF  M  +NVF+YSSMILG A HGRA  AL L
Sbjct: 317 YSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHL 376

Query: 367 FHDML-KTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLL 426
           FH M+ +TEI+PN VTF+G L ACSH+GLV+QGRQ+F  M + FGV P+ DHY CMVDLL
Sbjct: 377 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLL 436

Query: 427 GRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYI 486
           GR G L+EAL+L+KTM  EP+GGVWGALLGACRIH NP+IA+IAA  LF+LEP+ IGNYI
Sbjct: 437 GRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYI 496

Query: 487 LLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIR 546
           LLSN+YASAG W  V ++RK+I+EKG KK P  SW   KNG++H FF G+  HP S++I+
Sbjct: 497 LLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQ 556

Query: 547 QALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIM 606
             L++L+ERL   GY+P+L S PYD++D+ K  IL+ H+EKLALA+ LL T    TI IM
Sbjct: 557 DKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIM 616

Query: 607 KNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
           KN+R+C DCH  M  ASE+TG+ II+RDNMRFHHF +G CSCG+FW
Sbjct: 617 KNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657

[Close]
BLAST of CSPI04G05300 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 506.5 bits (1303), Expect = 3.1e-143
Identity = 242/611 (39.61%), Postives = 384/611 (62.85%), Query Frame = 0 

Query: 46  MSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLT-----KVDVPMGSYPLLVFG 105
           +++L  C+ FS +K +H  ++R  L    +V ++L+ +            +  Y   +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 106 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDL 165
           Q+  PN F++  +IR ++     S++  FYT+M +  + P + TF  L KA      + +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 166 GKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYA 225
           G+Q H+Q +   GF +D+YV NS++ +Y  CGF+  A ++F +M  RDVVSWT ++  Y 
Sbjct: 136 GEQTHSQIVRF-GFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 195

Query: 226 KYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 285
           K G +E+A  +FD++P +++  W+ M+ GYA+N   ++A++ F+ M+  G+  +E  +  
Sbjct: 196 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 255

Query: 286 VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE 345
           VIS+CA LGA++      +   +S    + N+++G+AL+DM+ +CG  ++A  VFE + E
Sbjct: 256 VISSCAHLGALEFGERAYEYVVKSHM--TVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 315

Query: 346 RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 405
            +  S+SS+I G A+HG AH A+  F  M+     P  VTF  +LSACSH GLVE+G ++
Sbjct: 316 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 375

Query: 406 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHG 465
           +  M+K  G+ P  +HY C+VD+LGRAG L EA + +  M  +PN  + GALLGAC+I+ 
Sbjct: 376 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 435

Query: 466 NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 525
           N ++A+   N L K++P   G Y+LLSNIYA AG+W+++  LR +++EK  KK PG S  
Sbjct: 436 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 495

Query: 526 EGKNGEIHDFFAG-DTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERIL 585
           E  +G+I+ F  G D  HP   +IR+  ++++ ++R  GYK N G A +D+ ++EKE  +
Sbjct: 496 E-IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSI 555

Query: 586 MSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHF 645
             HSEKLA+AYG++ T+ G TI+I+KN+R+CEDCH V    SE+ GRE+IVRD  RFHHF
Sbjct: 556 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 615

Query: 646 HNGTCSCGNFW 651
            NG CSC ++W
Sbjct: 616 RNGVCSCRDYW 622

[Close]
BLAST of CSPI04G05300 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 496.9 bits (1278), Expect = 2.5e-140
Identity = 235/555 (42.34%), Postives = 353/555 (63.60%), Query Frame = 0 

Query: 98  VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
           VF  +   +   W +MI G+  +G   ++   + +M  + V     T   +  AC    N
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247

Query: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
           ++ G+QV    I       +L + N+M+D+Y KCG +  A+++FD M E+D V+WT ++ 
Sbjct: 248 LEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 307

Query: 218 AYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ-DVGMETDEV 277
            YA   D E+A  + + +P KD+VAW A+++ Y QNG+P EAL  F ++Q    M+ +++
Sbjct: 308 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 367

Query: 278 TLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 337
           TL   +SACAQ+GA++   WI    ++ G     N  V SALI MYSKCG  +++ +VF 
Sbjct: 368 TLVSTLSACAQVGALELGRWIHSYIKKHGI--RMNFHVTSALIHMYSKCGDLEKSREVFN 427

Query: 338 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQ 397
            +++R+VF +S+MI G AMHG  + A+ +F+ M +  ++PN VTF  +  ACSH GLV++
Sbjct: 428 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 487

Query: 398 GRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGAC 457
              LF +ME  +G+ P   HYAC+VD+LGR+G LE+A+  ++ MP  P+  VWGALLGAC
Sbjct: 488 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 547

Query: 458 RIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPG 517
           +IH N ++A++A   L +LEP   G ++LLSNIYA  G+WE VS+LRK +R  G KK PG
Sbjct: 548 KIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPG 607

Query: 518 CSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDE-K 577
           CS  E  +G IH+F +GD  HP S ++   L +++E+L+S+GY+P +      + ++E K
Sbjct: 608 CSSIE-IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMK 667

Query: 578 ERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMR 637
           E+ L  HSEKLA+ YGL+ TEA   I+++KN+R+C DCH+V    S++  REIIVRD  R
Sbjct: 668 EQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYR 727

Query: 638 FHHFHNGTCSCGNFW 651
           FHHF NG CSC +FW
Sbjct: 728 FHHFRNGQCSCNDFW 738

[Close]
BLAST of CSPI04G05300 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 496.9 bits (1278), Expect = 2.5e-140
Identity = 242/610 (39.67%), Postives = 367/610 (60.16%), Query Frame = 0 

Query: 43  WRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRM-LTKVDVPMGSYPLLVFGQ 102
           +  MS L  C+   ++KQ+HA +++ GL Q SY +TK +   ++        Y  +VF  
Sbjct: 15  YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74

Query: 103 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 162
            + P+ FLW  MIRG++       S   Y RM        ++TF +L KAC      +  
Sbjct: 75  FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134

Query: 163 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 222
            Q+HAQ   + G+ +D+Y  NS+I+ Y   G    A  +FD + E D VSW  +I  Y K
Sbjct: 135 TQIHAQITKL-GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 194

Query: 223 YGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 282
            G M+ A  LF  +  K+ ++WT M++GY Q    KEAL+ F +MQ+  +E D V+LA  
Sbjct: 195 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 254

Query: 283 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 342
           +SACAQLGA++   WI     ++        V+G  LIDMY+KCG  +EA +VF+ +K++
Sbjct: 255 LSACAQLGALEQGKWIHSYLNKTRIRMDS--VLGCVLIDMYAKCGEMEEALEVFKNIKKK 314

Query: 343 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 402
           +V +++++I GYA HG    A+  F +M K  I+PN +TF  +L+ACS+ GLVE+G+ +F
Sbjct: 315 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 374

Query: 403 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGN 462
             ME+ + + P+ +HY C+VDLLGRAG L+EA   ++ MP +PN  +WGALL ACRIH N
Sbjct: 375 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 434

Query: 463 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 522
            ++ +     L  ++P   G Y+  +NI+A   +W++ ++ R++++E+G  K PGCS   
Sbjct: 435 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI- 494

Query: 523 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLT-DDEKERILM 582
              G  H+F AGD +HP   +I+   + +  +L  +GY P L     DL  DDE+E I+ 
Sbjct: 495 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 554

Query: 583 SHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFH 642
            HSEKLA+ YGL+ T+ G  I+IMKN+R+C+DCH V    S+I  R+I++RD  RFHHF 
Sbjct: 555 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 614

Query: 643 NGTCSCGNFW 651
           +G CSCG++W
Sbjct: 615 DGKCSCGDYW 620

[Close]
BLAST of CSPI04G05300 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 491.5 bits (1264), Expect = 1.0e-138
Identity = 251/597 (42.04%), Postives = 372/597 (62.31%), Query Frame = 0 

Query: 57  QIKQVHAHIIR-NGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIR 116
           ++ Q+HA I+R N L    Y +  L             + L +F Q   P+ FL+TA I 
Sbjct: 44  EVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAIN 103

Query: 117 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 176
             ++ GL  ++   Y ++    + P  FTFS+L K+C    +   GK +H   +L  G  
Sbjct: 104 TASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTH-VLKFGLG 163

Query: 177 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 236
            D YV   ++D+Y K G +  A+KVFD M ER +VS T +I  YAK G++E+A  LFD +
Sbjct: 164 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 223

Query: 237 PLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM-ETDEVTLAGVISACAQLGAVKHA 296
             +D+V+W  M+ GYAQ+G P +AL  FQK+   G  + DE+T+   +SAC+Q+GA++  
Sbjct: 224 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 283

Query: 297 NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYA 356
            WI    + S      NV V + LIDMYSKCGS +EA  VF     +++ ++++MI GYA
Sbjct: 284 RWIHVFVKSSRI--RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA 343

Query: 357 MHGRAHSALQLFHDMLK-TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 416
           MHG +  AL+LF++M   T ++P  +TFIG L AC+HAGLV +G ++F  M + +G+ P 
Sbjct: 344 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 403

Query: 417 PDHYACMVDLLGRAGCLEEALDLVKTMPTEPNGGVWGALLGACRIHGNPDIAQIAANELF 476
            +HY C+V LLGRAG L+ A + +K M  + +  +W ++LG+C++HG+  + +  A  L 
Sbjct: 404 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 463

Query: 477 KLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAG 536
            L     G Y+LLSNIYAS G +E V+K+R +++EKG  K PG S  E +N ++H+F AG
Sbjct: 464 GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN-KVHEFRAG 523

Query: 537 DTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLL 596
           D  H +S EI   L+++ ER++SHGY PN  +   DL + EKE+ L  HSE+LA+AYGL+
Sbjct: 524 DREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLI 583

Query: 597 CTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 651
            T+ G  +KI KN+R+C DCH V    S+ITGR+I++RD  RFHHF +G+CSCG+FW
Sbjct: 584 STKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

The following BLAST results are available for this feature:
BLAST of CSPI04G05300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FFG81.3e-22959.91Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX... [more]
Q9FG164.4e-14239.61Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
O823803.5e-13942.34Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9FJY73.5e-13939.67Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9SZT81.5e-13742.04Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
BLAST of CSPI04G05300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUQ80.0e+0099.69DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0450... [more]
A0A5D3CXQ60.0e+0096.46Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BU850.0e+0096.46pentatricopeptide repeat-containing protein At5g44230 OS=Cucumis melo OX=3656 GN... [more]
A0A5A7TN810.0e+0096.31Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1C5120.0e+0086.92pentatricopeptide repeat-containing protein At5g44230 OS=Momordica charantia OX=... [more]
BLAST of CSPI04G05300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146494.10.0e+0099.69pentatricopeptide repeat-containing protein At5g44230 [Cucumis sativus] >KGN5328... [more]
XP_008452110.10.0e+0096.46PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Cucumis melo] ... [more]
KAA0044782.10.0e+0096.31pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_022136825.10.0e+0086.92pentatricopeptide repeat-containing protein At5g44230 [Momordica charantia][more]
XP_038874627.10.0e+0087.08pentatricopeptide repeat-containing protein At5g44230 [Benincasa hispida][more]
BLAST of CSPI04G05300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G44230.18.9e-23159.91Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G06540.13.1e-14339.61Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G29760.12.5e-14042.34Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G66520.12.5e-14039.67Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G37380.11.0e-13842.04Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 417..441
e-value: 0.025
score: 14.8
coord: 109..138
e-value: 3.7E-4
score: 20.5
coord: 210..235
e-value: 0.012
score: 15.8
coord: 182..208
e-value: 1.3E-4
score: 21.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 238..286
e-value: 1.1E-8
score: 35.2
coord: 341..389
e-value: 8.0E-10
score: 38.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 109..140
e-value: 0.0023
score: 16.0
coord: 182..210
e-value: 1.2E-4
score: 20.0
coord: 344..377
e-value: 2.6E-6
score: 25.2
coord: 241..274
e-value: 2.5E-7
score: 28.4
coord: 317..343
e-value: 1.8E-4
score: 19.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 106..140
score: 10.972319
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..211
score: 9.481582
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 342..376
score: 11.673842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..273
score: 11.947875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 311..341
score: 9.580234
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 294..395
e-value: 2.7E-25
score: 90.8
coord: 206..293
e-value: 3.9E-22
score: 80.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 43..171
e-value: 1.7E-10
score: 42.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 396..528
e-value: 5.6E-14
score: 54.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 219..498
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 515..639
e-value: 5.3E-43
score: 145.9
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 13..633
NoneNo IPR availablePANTHERPTHR47926:SF205BNAC09G18050D PROTEINcoord: 13..633

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G05300.1CSPI04G05300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding