CSPI04G03840 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G03840
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RAB GTPase homolog A5D
Location	Chr4: 2387660 .. 2390743 (-)
RNA-Seq Expression	CSPI04G03840
Synteny	CSPI04G03840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGGATATAATAGAAAAATGGATTTAAAAGAAAATGGTAGAAATATGGATGGAAAAATGTAAGAATATATATTATATAGAGAAAAAGGGAATTGGGAAAGAGAGGATGATGAAAGGAGAGCAGTAGCACTACATGCGCAGCTTGTCTCTCTGCCAGCTTTGCTTCTTCTATCTTCATCCATTCCTCCATTTCTCCATTATTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTTCTCTCTCTAACCAGCTTTCTTCCACATTCTTGCTTTTATTCATTTGAATTTTTCGCCAATGTCATCCTCCGACGACGAAGGCGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGATTCTGCCGTCGGTAAGTCCAATTTGCTCTCTCGTTATGCTAGAAACGAGTTTAATCTCCACTCCAAAGCCACCATCGGCGTCGAATTTCAAACTCAGGTTATGGATATTGACGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCTGGCCAGGAAAGGTTCCGTGCTGTTACCTCTGCCTATTACCGCGGTGCTGTTGGTGCTCTTATCGTTTATGATATCAGCCGTCGCTCCACTTTTGATAGTGTCGGCCGATGGCTCGACGAGCTCAAGAGTGAGTTCCTGTCTTTTTCTATTCTCTCTCACTCAATCAACTCTCTCTCTTCTTTTGATCTTGTTCTTGTTGTGGTCTTTTGGTTGAGATGTCTAGATCTGGATTGATAAGCTTTTAAGATTTTGTTTAGTTACTTTAACTAACTCAATCCTGATGATTGAGATGGCTTACTCTTGATTCTTGAACTTTAAGTTTTCTTTCATCTTTCAAATAATTCAGATCTGGTTCGGTTTTGTCTTTGTTCTGTACAATTTCGGGTGATGAGAAATTCTGTTTCTTGGATTTTGCTTGTCTTATTAGCATCTAATTCGGTGCTTCTGTCCTCCGTTCTGAACAAGAAAATTTCATTCTCAGACTTCAAGCTTCAAATGTTAGGTGTTGGCCAACCTAAATGCACTTGTTCTTGAAAACTTTCAGTTACTTTTTAGAATAGCTTAATTAAGTTCAACGTGTAGAACTTAATTACCGGCTCATGTTTTGGCCTTACATTTGGATCAACAAATCTCTCCTGTGTCACTTGTTCTTACAAAATTTCTGGTTTAGGCACTGCTTTGAGTTGAGTAATTGCTCATAATTTAGATGTGGTCAATTCCTACATGACTGATTATTCCAAAAAAACTGAAAAGAACAAACTGAAAAGAAAGAAAGAAAAGATAATTTCTGGTTTGGAGTATCCATTTAGATCGAAAGTTCAGTCGCCTTTCATGGGAGTGAGATTACCTTGATAATGCTAACCTCATAGCCTTACCTTGCACTTGAAAAGTTGTTGGGGTAAATCCTATTTGAATCCCTAAACTTTGGTCTTTATACTTTTGAATTATTTGGATTTGCTCACTAAGGTTTTGCATTTCTGTTCGTTTGGGTCTTGCTGTGAATCTTTATATTGTATTTAGCGTAATTCTTGGTTCATTGTTTGGGTGAATAGTAATTGATGTAAACCTTGTGTAGATATGAATTTGATGCAAATTTACATCCGAGCTAGCATCAAGAAACTCTCCTGTCATTTGTTCTATTGCTTAGGTTTTGTCACTGTCTTGGAATTCCGGATAGCGGATACCATACTTAATAACACGTTGTTCCAATTTTAGGGAGAACTTAGTAGTTTTTATAACTTTTTTTTCTTAAATAAATAATTTGTGTTCTGTATTTCTTGTAGTATGATGCTAAGAATGGAAATTACTGTCTCCCATTGTGAATTGCATGAAAGTTACATATTGTGAAAAGAGATATGGGCTCTTTTTTTTTTAGTTTACTTGTACATTCTTCTAATTATAGTATTTTGGGTAACTGTTCTTATTTTAAAAGGTGTGTTCTGTATTTCTTTTAGTACGTTCACACAAATAATCTATTTTCCAAAGAAACAACAGAGCTATTTCTTCTAAGATGATGGATCTGTGACTAGTGATCTTACTATATACAATGGCAGTTACTTTCTTTTTCTGATCTTTCAATCATTATTTTCAACAACAGTGATCTTGCTTAGTTGAGTTGGTTTCAAAAATTGTTTCGGGTTGGGGCTGGGCAAATTGTCTGTTAAAATCGAGCGGCCTTCCTGTAATTTTTACTTAATCAATTGGAGCAAATCATCAACCTTTGCAATGGAAATTGGTGTTTTGTGATTAATGAGTCCAAATTAATCGTTTTGATAAGTAGTCATCATTAGCTACTACATGCTTGATTGCTTGATATCTCTGTTCCACTGTTAATGTCTTGTATTATTGTGCTCTTTTCCACTTCTAATGTTGAATTTATTCTATAAAGTTGCTTAAGTGATCAATTTTTCATTCAAATCGTTTGCAGCTCATTCCGATACAACTGTAGCAATGATGCTAGTCGGGAACAAATGCGATTTGGAGAACATTAGGGATGTAAGTGTCGAGGATGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTGAAAAGGGCATTTGAAATTGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAATTCAGATACATACAAAGCAGAATTATCGGTGAACCGGGTGAGCCTCGTGAACAATGGTGGATCGAAGCAATCAGAAGGATACTTGTCTTGCTGTTCCAGGTGATTGATTATCTTTTCATCTCTTAGCTCCACAAAATTAGTGTTGTTATTTTCACCATGTTGGCTTCCTAAAGTCTCCTGTTTTTGGTTGGTGTGGTGAATCAATCAAATTTATGTGTTTGTTTGTTTCATAAATTTCACTCAAAAGCGCTCCACATATGCATGCAATATGTAAGACCATTTCCAAATATAGAAAAGAAATCATTTCTTTCAATTTAATTAAGAAGAGACAGTGAAAAAGAAAACACTTTTTGTATTAATTATTTATTTGAAGCAAATTGTAAGAGCAAGCAAATTTGAACATTATTTTATTTAATTTTTGAATATCTTTTTAGTTTG

mRNA sequence

ATTAGGATATAATAGAAAAATGGATTTAAAAGAAAATGGTAGAAATATGGATGGAAAAATGTAAGAATATATATTATATAGAGAAAAAGGGAATTGGGAAAGAGAGGATGATGAAAGGAGAGCAGTAGCACTACATGCGCAGCTTGTCTCTCTGCCAGCTTTGCTTCTTCTATCTTCATCCATTCCTCCATTTCTCCATTATTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTTCTCTCTCTAACCAGCTTTCTTCCACATTCTTGCTTTTATTCATTTGAATTTTTCGCCAATGTCATCCTCCGACGACGAAGGCGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGATTCTGCCGTCGGTAAGTCCAATTTGCTCTCTCGTTATGCTAGAAACGAGTTTAATCTCCACTCCAAAGCCACCATCGGCGTCGAATTTCAAACTCAGGTTATGGATATTGACGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCTGGCCAGGAAAGGTTCCGTGCTGTTACCTCTGCCTATTACCGCGGTGCTGTTGGTGCTCTTATCGTTTATGATATCAGCCGTCGCTCCACTTTTGATAGTGTCGGCCGATGGCTCGACGAGCTCAAGACTCATTCCGATACAACTGTAGCAATGATGCTAGTCGGGAACAAATGCGATTTGGAGAACATTAGGGATGTAAGTGTCGAGGATGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTGAAAAGGGCATTTGAAATTGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAATTCAGATACATACAAAGCAGAATTATCGGTGAACCGGGTGAGCCTCGTGAACAATGGTGGATCGAAGCAATCAGAAGGATACTTGTCTTGCTGTTCCAGGTGATTGATTATCTTTTCATCTCTTAGCTCCACAAAATTAGTGTTGTTATTTTCACCATGTTGGCTTCCTAAAGTCTCCTGTTTTTGGTTGGTGTGGTGAATCAATCAAATTTATGTGTTTGTTTGTTTCATAAATTTCACTCAAAAGCGCTCCACATATGCATGCAATATGTAAGACCATTTCCAAATATAGAAAAGAAATCATTTCTTTCAATTTAATTAAGAAGAGACAGTGAAAAAGAAAACACTTTTTGTATTAATTATTTATTTGAAGCAAATTGTAAGAGCAAGCAAATTTGAACATTATTTTATTTAATTTTTGAATATCTTTTTAGTTTG

Coding sequence (CDS)

ATGTCATCCTCCGACGACGAAGGCGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGATTCTGCCGTCGGTAAGTCCAATTTGCTCTCTCGTTATGCTAGAAACGAGTTTAATCTCCACTCCAAAGCCACCATCGGCGTCGAATTTCAAACTCAGGTTATGGATATTGACGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCTGGCCAGGAAAGGTTCCGTGCTGTTACCTCTGCCTATTACCGCGGTGCTGTTGGTGCTCTTATCGTTTATGATATCAGCCGTCGCTCCACTTTTGATAGTGTCGGCCGATGGCTCGACGAGCTCAAGACTCATTCCGATACAACTGTAGCAATGATGCTAGTCGGGAACAAATGCGATTTGGAGAACATTAGGGATGTAAGTGTCGAGGATGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTGAAAAGGGCATTTGAAATTGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAATTCAGATACATACAAAGCAGAATTATCGGTGAACCGGGTGAGCCTCGTGAACAATGGTGGATCGAAGCAATCAGAAGGATACTTGTCTTGCTGTTCCAGGTGA

Protein sequence

MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR*

Homology

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BLAST of CSPI04G03840 vs. ExPASy Swiss-Prot
Match: Q9SIP0 (Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 7.2e-97
Identity = 182/216 (84.26%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRSTF+SVGRWLDELKTHSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLE+IR VSVE+G +LAE EGLFFMETSALDSTNVK AFE+VIR+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDTYKAELSV-NRVSLVNNGGSKQSEGY-LSCCS 217
           LNSDTYK ELS+ NRVSLV +     ++G+  SCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

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BLAST of CSPI04G03840 vs. ExPASy Swiss-Prot
Match: P19892 (Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.3e-95
Identity = 181/216 (83.80%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR+TF+SVGRWLDELK HSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIR VSVE+G +LAE EGLFF+ETSALDSTNVK AFE+VI +IYNNVSRK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDTYKAELSVNRVSLV--NNGGSKQSEGYLSCCS 217
           LNSDTYK EL+VNRVSLV  +N  SKQS G+ SCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGF-SCCS 216

[Close]

BLAST of CSPI04G03840 vs. ExPASy Swiss-Prot
Match: P28187 (Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.7e-93
Identity = 176/215 (81.86%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R STF++VGRWLDEL THSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           L+GNKCDLE+IR VSVE+G SLAE+EGLFFMETSALDSTNVK AFE+VIREIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           LNSD+YK EL+VNRVSLV N    +     SCCSR
Sbjct: 182 LNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

[Close]

BLAST of CSPI04G03840 vs. ExPASy Swiss-Prot
Match: Q9SRS5 (Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.2e-89
Identity = 169/214 (78.97%), Postives = 191/214 (89.25%), Query Frame = 0


Query: 5   DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKA 64
           +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  TF+SV RWL EL TH DT VA MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLN 184
           GNKCDLE+IR VSVE+G +LAE EGLFFMETSALD+TNV +AFEIVIREI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDTYKAELSVNRVSLVNN-GGSKQSEGYLSCCSR 218
           SD YKAELSVNRVSLVNN  GS+ S    SCCSR
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. ExPASy Swiss-Prot
Match: Q9FGK5 (Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.6e-72
Identity = 143/218 (65.60%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 4   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
           S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+K
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMML 123
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S+GRWL+EL THSD  V  +L
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 124 VGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVL 183
           VGNK DL+++R+VS  +G +LAEA+GLFFMETSALDS+NV  AFE V++EIYN +SRKV+
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 184 NSDTYK----AELS-VNRVSLVNNGGSKQSEGYLSCCS 217
           +S        A LS   +V + ++G  +  +G   CCS
Sbjct: 185 SSQELNKQDPASLSNGKKVVIPSDGQGEFKKG--GCCS 220

[Close]

BLAST of CSPI04G03840 vs. ExPASy TrEMBL
Match: A0A0A0KU21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017180 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. ExPASy TrEMBL
Match: A0A5A7TS03 (Ras-related protein RABA5d OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00890 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 7.9e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDV+VE+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. ExPASy TrEMBL
Match: A0A1S3BXI0 (ras-related protein RABA5d OS=Cucumis melo OX=3656 GN=LOC103494499 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 7.9e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDV+VE+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. ExPASy TrEMBL
Match: A0A6J1EXF0 (ras-related protein RABA5d-like OS=Cucurbita moschata OX=3662 GN=LOC111439098 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.4e-113
Identity = 211/217 (97.24%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHS+TTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSETTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
            MLVGNKCDL+NIRDVS+E+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSE YLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. ExPASy TrEMBL
Match: A0A6J1I7X8 (ras-related protein RABA5d-like OS=Cucurbita maxima OX=3661 GN=LOC111470815 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.8e-112
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHS+TTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSETTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
            MLVGNKCDL+NIRDVS+E+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSE YLSCC R
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCPR 217

[Close]

BLAST of CSPI04G03840 vs. NCBI nr
Match: XP_004152077.1 (ras-related protein RABA5d [Cucumis sativus] >KGN53130.1 hypothetical protein Csa_014518 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. NCBI nr
Match: XP_008453919.1 (PREDICTED: ras-related protein RABA5d [Cucumis melo] >KAA0044637.1 ras-related protein RABA5d [Cucumis melo var. makuwa] >TYK16951.1 ras-related protein RABA5d [Cucumis melo var. makuwa])

HSP 1 Score: 422.9 bits (1086), Expect = 1.6e-114
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDV+VE+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. NCBI nr
Match: XP_038876476.1 (ras-related protein RABA5d-like [Benincasa hispida])

HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDV+VE+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGY SCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. NCBI nr
Match: XP_022932589.1 (ras-related protein RABA5d-like [Cucurbita moschata])

HSP 1 Score: 416.4 bits (1069), Expect = 1.5e-112
Identity = 211/217 (97.24%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHS+TTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSETTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
            MLVGNKCDL+NIRDVS+E+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSE YLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. NCBI nr
Match: XP_022972219.1 (ras-related protein RABA5d-like [Cucurbita maxima] >XP_022972220.1 ras-related protein RABA5d-like [Cucurbita maxima])

HSP 1 Score: 414.5 bits (1064), Expect = 5.8e-112
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHS+TTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSETTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
            MLVGNKCDL+NIRDVS+E+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 RMLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSE YLSCC R
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCPR 217

[Close]

BLAST of CSPI04G03840 vs. TAIR 10
Match: AT2G31680.1 (RAB GTPase homolog A5D )

HSP 1 Score: 354.8 bits (909), Expect = 5.1e-98
Identity = 182/216 (84.26%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRSTF+SVGRWLDELKTHSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLE+IR VSVE+G +LAE EGLFFMETSALDSTNVK AFE+VIR+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDTYKAELSV-NRVSLVNNGGSKQSEGY-LSCCS 217
           LNSDTYK ELS+ NRVSLV +     ++G+  SCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of CSPI04G03840 vs. TAIR 10
Match: AT1G05810.1 (RAB GTPase homolog A5E )

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-96
Identity = 181/216 (83.80%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEV
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR+TF+SVGRWLDELK HSDTTVA M
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIR VSVE+G +LAE EGLFF+ETSALDSTNVK AFE+VI +IYNNVSRK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDTYKAELSVNRVSLV--NNGGSKQSEGYLSCCS 217
           LNSDTYK EL+VNRVSLV  +N  SKQS G+ SCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGF-SCCS 259

[Close]

BLAST of CSPI04G03840 vs. TAIR 10
Match: AT2G43130.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 2.6e-94
Identity = 176/215 (81.86%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R STF++VGRWLDEL THSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           L+GNKCDLE+IR VSVE+G SLAE+EGLFFMETSALDSTNVK AFE+VIREIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           LNSD+YK EL+VNRVSLV N    +     SCCSR
Sbjct: 182 LNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

[Close]

BLAST of CSPI04G03840 vs. TAIR 10
Match: AT3G07410.1 (RAB GTPase homolog A5B )

HSP 1 Score: 329.3 bits (843), Expect = 2.3e-90
Identity = 169/214 (78.97%), Postives = 191/214 (89.25%), Query Frame = 0


Query: 5   DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKA 64
           +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  TF+SV RWL EL TH DT VA MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLN 184
           GNKCDLE+IR VSVE+G +LAE EGLFFMETSALD+TNV +AFEIVIREI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDTYKAELSVNRVSLVNN-GGSKQSEGYLSCCSR 218
           SD YKAELSVNRVSLVNN  GS+ S    SCCSR
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of CSPI04G03840 vs. TAIR 10
Match: AT5G47520.1 (RAB GTPase homolog A5A )

HSP 1 Score: 272.7 bits (696), Expect = 2.5e-73
Identity = 143/218 (65.60%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 4   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
           S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+K
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMML 123
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S+GRWL+EL THSD  V  +L
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 124 VGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVL 183
           VGNK DL+++R+VS  +G +LAEA+GLFFMETSALDS+NV  AFE V++EIYN +SRKV+
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 184 NSDTYK----AELS-VNRVSLVNNGGSKQSEGYLSCCS 217
           +S        A LS   +V + ++G  +  +G   CCS
Sbjct: 185 SSQELNKQDPASLSNGKKVVIPSDGQGEFKKG--GCCS 220

The following BLAST results are available for this feature:

BLAST of CSPI04G03840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIP0	7.2e-97	84.26	Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1	[more]
P19892	2.3e-95	83.80	Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1	[more]
P28187	3.7e-93	81.86	Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1	[more]
Q9SRS5	3.2e-89	78.97	Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1	[more]
Q9FGK5	3.6e-72	65.60	Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1	[more]

BLAST of CSPI04G03840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU21	1.2e-115	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017180 PE=4 SV=1	[more]
A0A5A7TS03	7.9e-115	99.08	Ras-related protein RABA5d OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BXI0	7.9e-115	99.08	ras-related protein RABA5d OS=Cucumis melo OX=3656 GN=LOC103494499 PE=4 SV=1	[more]
A0A6J1EXF0	7.4e-113	97.24	ras-related protein RABA5d-like OS=Cucurbita moschata OX=3662 GN=LOC111439098 PE...	[more]
A0A6J1I7X8	2.8e-112	96.77	ras-related protein RABA5d-like OS=Cucurbita maxima OX=3661 GN=LOC111470815 PE=4...	[more]

BLAST of CSPI04G03840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152077.1	2.5e-115	100.00	ras-related protein RABA5d [Cucumis sativus] >KGN53130.1 hypothetical protein Cs...	[more]
XP_008453919.1	1.6e-114	99.08	PREDICTED: ras-related protein RABA5d [Cucumis melo] >KAA0044637.1 ras-related p...	[more]
XP_038876476.1	4.8e-114	98.62	ras-related protein RABA5d-like [Benincasa hispida]	[more]
XP_022932589.1	1.5e-112	97.24	ras-related protein RABA5d-like [Cucurbita moschata]	[more]
XP_022972219.1	5.8e-112	96.77	ras-related protein RABA5d-like [Cucurbita maxima] >XP_022972220.1 ras-related p...	[more]

BLAST of CSPI04G03840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31680.1	5.1e-98	84.26	RAB GTPase homolog A5D	[more]
AT1G05810.1	1.6e-96	83.80	RAB GTPase homolog A5E	[more]
AT2G43130.1	2.6e-94	81.86	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G07410.1	2.3e-90	78.97	RAB GTPase homolog A5B	[more]
AT5G47520.1	2.5e-73	65.60	RAB GTPase homolog A5A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 50.36 coord: 55..77 score: 53.91 coord: 152..174 score: 41.95 coord: 37..53 score: 33.77 coord: 117..130 score: 51.72
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 2.1E-28 score: 110.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 2.1E-103 score: 359.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 e-value: 1.0E-4 score: 18.0
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..217
None	No IPR available	PANTHER	PTHR47979:SF30	RAS-RELATED PROTEIN RABA5C	coord: 1..217
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 33.832966
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..183 score: 10.325729
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 2.57093E-109 score: 308.72
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..177 e-value: 8.5E-13 score: 43.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 6.4E-60 score: 201.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 16.205238
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..205 e-value: 3.0E-67 score: 227.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..186
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 7.5E-37 score: 124.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G03840.1	CSPI04G03840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding