CSPI04G03820 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAAAAAATGGTGGGTTTAGAAAATGCAGACAAGTCTTCTCTTCGAAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAATAAGCCTAGGAACGCCAAGAAGAGAAAGCCCGATGTGAACCACAATCGCCATGCTCAAGAGACCACAAATGGTAGTGAAGCCATTGCATCAGAGCCACTTCCATTGGAGCCCTTCAGCTTTTTCCTGAATGAGTTCCAAACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGATTCCATGAAAGGTGCTTTACTAATCTGTGTCATATTCTTATTCTTTTTCCATGGAATATAATGTAATATGTTTTGTAGTGTTTAATTGTATTCGGCATCCATTTTTTCTTTTCTGAATGCGTCAGAATTTATCTGGTTTTTGTTATGATTGAAATTTTTTGTAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATGTTAAGGAAGCTTTTGGATCGTCGTGGAAAGAAATTCTATGTAAGGGGGAACTCTTGGAAGGACGGACTGAACCTGGGAGTCCTGCAGTTCTTATAATCAGTACATCTGCACTTAGGTCGATTGAACTTTTAAAGTAAGATGGATAATTTTTTTCTGCTAGTATGTTTTTGAAATAAGTGCGTGCTTTTGTTTAACTCATTTATATTTATTAGGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTAGGTGGAAGTTTCTTTCCATGATATTTTCTCTTTTAGATGATTCTGAGATAGGGGTAACATATGTTTTTGTTGTTTGATGATGTTTCAAGTTGTATGGTTTACCAATTCTTTCAATTGAATGCTTGTTGTATATCAACGCTAAACAGAGTGTGGATGATAATTGTTTATATTTTGCTATCTGGAACAAGTGGGAAGAGTTCTTGATATGTTTTAAGAGGCCTGAAGTAGTCATTCTTTTCTTTATGTTGAAAACCTCGTAGTTTCAAAATTTTGTTTGGGAGATGAAGATAATTCAAAAAACCATCTGAGGCAAAAACACTGCTGAATTTAATGGTTTGCACGTCAGTCTGATCCTGTATTTTCATTACCTTTGCTTTTAATTTTCCTGATTTCTGAAACTGATCTTATCTTATCTTTGTGATTCATTCCAGTTTTGATCTTCATGGTCACATGATTAATTTTGTGAGAAGTGTTTGTTATACACTGCTTCTCTTCATGAGCTTGGAAAGCTCAAGCAGTGATTTAGCTTCTTGATTCTTCAACACATAACAAGTAACATTATTCAGCATTAGCAATTGGTGATTTTTATGGCTCTATTCTTTTTTTGGTAACTGGGTGTCCTGGCCAATTAGTGGTTTCCATGTGCATCCATGCAACTGCTTTTCTTTATTTTGTTTGGGAAGTGATGACAAACTAGAAAAGTTTCTCAGATGCAGTTGCTATGCTGAACTTTTTATTTGCACGTCAGTCTGATCCCGTTTTCTCAATAACATGGTTGTCATTTCTGAGCTTATGAATGCTAGACTTGAATTTTTCTTGTTATTTTTAATGGTTTTTTAAAAAACAAGGATATAGAATTGGCATTTTTGCATTCCCCGTTGACCTCTTCAAACAATCATTAACATCCTTAACTTTTCCTTTAAATTTTTTGCGTTCCCTCTTCTTTTTGTTTTCTTACATCCATTTTGGACACAGATCTCTTATTTTTATGTGAAATCTTCAACTGAACTCCCAATATTATTTTCAGTTGGAAATTTTTATGGTGATCACAATTATGTTATCTTATTTTTAAAGTATGGGAAATGAAGACAAATTGAAAATTTCATCAGAGGTAGATACTATGCTGAACTCTATTGCACGTCAGTCTGATCCCTATAATTGTTTATTGGGTGTAATCTATGCGATTATTACATAAAGTATTTTTTGGGTCCAAGATGAAAGGGGGGATGGGGCAATTCCAGGTTTTGTTATTCTGTTGTGATTTAGATAATTCCGTCTAGTTCACATTTCTGCTGAATTCGTTCAAGATCCTTTTGAATTGTGCAAAATTGTTTCAAATGACATCTAATTTCAATTGTGTCTCTAACCATCTGTGTAATGCAACATTACTTGGTGGTTTTTCTTAAAACATCCAATTGTCGGTTTTGGTTTTCATATCTCTTGAACTGTTATTGTTATTCCCTTTATGATGGGTGCAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACACCGAGCAGGTTAGGCTTTTTTTGTATTGGGTTTATCGTTCAGGAATTCTAGTTCCAGATTTTGTTTCTAATGGAGTACTGTTGAGCATCTATATTGATTATCTACATTCTTCCGGGATCTATCTCTTCTCATATACATACTCTTCTGTGTCTATTTTAGGATTAAAAAATTGATTGACATTGAGGCGTTGGGGCTGTCAAGACTAGCCGTCATTGTGCTGGACGTTCAACCAGATGTCAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGGTTTGAAAACCTCCTTTATATAACTTGTCTCAACTTCCTCGATCTATGTTCAAATTAGAAGAGAATGTTTTTATATAAATAGCTGCTCATAAAATTCATATTGCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGGATAGTCGAGGGTGAGCTGCGAATTTGCCTCTTTGGACCTTTACAACCTACTCGTAAACGAAGAAAAAAGGGAATTTAGTTATTGTTAATGCATCCTCAAAATTCATCAGTTCCCTCAAATTATCTTTCATCACTTGATCATTTTTCCCCAACTTCCGTTTCATTCCTATAATTCCGATTTGGTTTGTTGTACCAAAATTTTGCAATCTGAGCTGAGAGTCAATTTTGAAGTCAAGCTGTGTGAAATATTACATTGTGTAATAGATTTTGGAATTATGTATAAATTATTCACCTTTTCTAA TAGAAAAAATGGTGGGTTTAGAAAATGCAGACAAGTCTTCTCTTCGAAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAATAAGCCTAGGAACGCCAAGAAGAGAAAGCCCGATGTGAACCACAATCGCCATGCTCAAGAGACCACAAATGGTAGTGAAGCCATTGCATCAGAGCCACTTCCATTGGAGCCCTTCAGCTTTTTCCTGAATGAGTTCCAAACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGATTCCATGAAAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATGTTAAGGAAGCTTTTGGATCGTCGTGGAAAGAAATTCTATGTAAGGGGGAACTCTTGGAAGGACGGACTGAACCTGGGAGTCCTGCAGTTCTTATAATCAGTACATCTGCACTTAGGTCGATTGAACTTTTAAAGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACACCGAGCAGGATTAAAAAATTGATTGACATTGAGGCGTTGGGGCTGTCAAGACTAGCCGTCATTGTGCTGGACGTTCAACCAGATGTCAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGGATAGTCGAGGGTGAGCTGCGAATTTGCCTCTTTGGACCTTTACAACCTACTCGTAAACGAAGAAAAAAGGGAATTTAGTTATTGTTAATGCATCCTCAAAATTCATCAGTTCCCTCAAATTATCTTTCATCACTTGATCATTTTTCCCCAACTTCCGTTTCATTCCTATAATTCCGATTTGGTTTGTTGTACCAAAATTTTGCAATCTGAGCTGAGAGTCAATTTTGAAGTCAAGCTGTGTGAAATATTACATTGTGTAATAGATTTTGGAATTATGTATAAATTATTCACCTTTTCTAA ATGGTGGGTTTAGAAAATGCAGACAAGTCTTCTCTTCGAAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAATAAGCCTAGGAACGCCAAGAAGAGAAAGCCCGATGTGAACCACAATCGCCATGCTCAAGAGACCACAAATGGTAGTGAAGCCATTGCATCAGAGCCACTTCCATTGGAGCCCTTCAGCTTTTTCCTGAATGAGTTCCAAACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGATTCCATGAAAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATGTTAAGGAAGCTTTTGGATCGTCGTGGAAAGAAATTCTATGTAAGGGGGAACTCTTGGAAGGACGGACTGAACCTGGGAGTCCTGCAGTTCTTATAATCAGTACATCTGCACTTAGGTCGATTGAACTTTTAAAGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACACCGAGCAGGATTAAAAAATTGATTGACATTGAGGCGTTGGGGCTGTCAAGACTAGCCGTCATTGTGCTGGACGTTCAACCAGATGTCAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGGATAGTCGAGGGTGAGCTGCGAATTTGCCTCTTTGGACCTTTACAACCTACTCGTAAACGAAGAAAAAAGGGAATTTAG MVGLENADKSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPLEPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYKSYLHPRIVEGELRICLFGPLQPTRKRRKKGI* Homology
BLAST of CSPI04G03820 vs. ExPASy Swiss-Prot
Match: Q5FVR6 (Protein CMSS1 OS=Rattus norvegicus OX=10116 GN=Cmss1 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.6e-13 Identity = 49/149 (32.89%), Postives = 85/149 (57.05%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy Swiss-Prot
Match: Q9CZT6 (Protein CMSS1 OS=Mus musculus OX=10090 GN=Cmss1 PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.7e-13 Identity = 50/149 (33.56%), Postives = 85/149 (57.05%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy Swiss-Prot
Match: Q5XJK9 (Protein CMSS1 OS=Danio rerio OX=7955 GN=cmss1 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 6.1e-13 Identity = 70/242 (28.93%), Postives = 116/242 (47.93%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy Swiss-Prot
Match: Q68EV5 (Protein CMSS1 OS=Xenopus laevis OX=8355 GN=cmss1 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 71/253 (28.06%), Postives = 123/253 (48.62%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy Swiss-Prot
Match: Q9BQ75 (Protein CMSS1 OS=Homo sapiens OX=9606 GN=CMSS1 PE=1 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 2.0e-11 Identity = 69/248 (27.82%), Postives = 117/248 (47.18%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy TrEMBL
Match: A0A0A0KUA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017160 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 2.2e-146 Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy TrEMBL
Match: A0A5A7TR86 (Protein CMSS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003890 PE=4 SV=1) HSP 1 Score: 516.2 bits (1328), Expect = 8.6e-143 Identity = 260/271 (95.94%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy TrEMBL
Match: A0A1S3BYM0 (protein CMSS1 OS=Cucumis melo OX=3656 GN=LOC103494501 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141 Identity = 258/271 (95.20%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy TrEMBL
Match: A0A5D3CZG6 (Protein CMSS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00910 PE=4 SV=1) HSP 1 Score: 509.2 bits (1310), Expect = 1.0e-140 Identity = 257/271 (94.83%), Postives = 263/271 (97.05%), Query Frame = 0
BLAST of CSPI04G03820 vs. ExPASy TrEMBL
Match: A0A6J1IXV6 (protein CMS1 OS=Cucurbita maxima OX=3661 GN=LOC111479452 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.3e-119 Identity = 225/278 (80.94%), Postives = 248/278 (89.21%), Query Frame = 0
BLAST of CSPI04G03820 vs. NCBI nr
Match: XP_004152079.1 (protein CMSS1 [Cucumis sativus] >KGN53128.1 hypothetical protein Csa_014754 [Cucumis sativus]) HSP 1 Score: 528.1 bits (1359), Expect = 4.5e-146 Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0
BLAST of CSPI04G03820 vs. NCBI nr
Match: KAA0044636.1 (protein CMSS1 [Cucumis melo var. makuwa]) HSP 1 Score: 516.2 bits (1328), Expect = 1.8e-142 Identity = 260/271 (95.94%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of CSPI04G03820 vs. NCBI nr
Match: XP_008453922.1 (PREDICTED: protein CMSS1 [Cucumis melo]) HSP 1 Score: 511.5 bits (1316), Expect = 4.4e-141 Identity = 258/271 (95.20%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of CSPI04G03820 vs. NCBI nr
Match: TYK16952.1 (protein CMSS1 [Cucumis melo var. makuwa]) HSP 1 Score: 509.2 bits (1310), Expect = 2.2e-140 Identity = 257/271 (94.83%), Postives = 263/271 (97.05%), Query Frame = 0
BLAST of CSPI04G03820 vs. NCBI nr
Match: XP_038906109.1 (protein CMS1 isoform X3 [Benincasa hispida]) HSP 1 Score: 469.2 bits (1206), Expect = 2.5e-128 Identity = 236/272 (86.76%), Postives = 255/272 (93.75%), Query Frame = 0
BLAST of CSPI04G03820 vs. TAIR 10
Match: AT2G43110.1 (unknown protein; Has 212 Blast hits to 211 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 264.6 bits (675), Expect = 8.7e-71 Identity = 145/278 (52.16%), Postives = 196/278 (70.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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