CSPI04G03490 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G03490
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein WHAT'S THIS FACTOR 1
LocationChr4: 2144646 .. 2147838 (-)
RNA-Seq ExpressionCSPI04G03490
SyntenyCSPI04G03490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCTTCAGTTCTTCGCACCTTTCAACAGGTTTGCTGATGTTCGTTTATCTTTTACATTACTTCTCATTTACAATCTCATGCTGTGCTACTTTACGTCTTAAACTCTGTTTAGGGTGCGGATTCGTGAGACTATATGCATGTCATGCCACTAAGTTGAATCAATTCATCTTGTAGCTGTGTCTAAAATCATTTACTTAGCTAGATTTATGTTAGGAGATGGATACTAAAAGTGGGTTTGTTTCTCTTTTTTTTCTTCTTTTAATTAATTTCTGTTCTTGCCTAAGAGGTGTTTGATGTTTGGATCGAGAATAATGGTGGTAGTGCTTGAGGAAATCGCCATTTGGTTTTGTGAATTTTAGAATACCAATAGTTATGGAAAGAAAGTGAACAGTGTGGAATAGGTAGTGGATTTGCATTATATTTACGTTTATAGTGAAGGATATTGATTGCTGTGGTTGGGATTTGCTAATTTGGTATCGTGATTTAATCTAACCCCAGGGAGAAGGGGGGAAAAAGGAGATAAAATGGAGTAATTGTTTGATCGCTGAACTTTTCTGAGGTCGACGCTTTTACTTTGTTCTATGGTTTACTCTTATTACCCATGTAACTGAAAAGAAGTTTTTTAAGAGAAGGATATCTGAAGATATTTCCTCCTCATATCATACTCTTTAAAAACCTGAAATTTACAGTCATAAGAAGAATCTGTAGACAAAAAAGAAGTCTTGGTTTACTATTTTCTAGTTTACTCTCTCCCATGACGCCAAACAATTTTCTTTCACTTATTTACATACGGTTCATTATGAATTCAAGAATATGAAAAATTTAGGCATTCTATTGTGAATATTCTGCTTTTGTTTATTTACATTTCAGTATTTTACTATCGAAATGCTTTTTTGGACTCTGCTGCACCTTGCTATTTTTTCTATTCAGAATTTTCACTTTGTACAAGTCAAGAAAGTATAAATACCATGGGACCATAAACTGTACTGAAACGTTAACTGCATAAATGCAATTTATGTTCTGCAGGTGGTAAAGAACCTCAAGATAGTTGCTTGCAGTTTAATCTGTTGATGCCAGACAGTAGCATCCCCCATCTGGTGGGTGCTCTTGAGTTAGAGTTGGAAGAATGATATGTGTCATCTTCTTTAGATTAATTTGATGAATCTGTTTACCTATTGTAATCTAAAAGCCCTTCCATTTATACAAAACTGAAAAATGGCTTTATGTTCTCATTTCTTGACCCCTACGGACTGGCATGTAACATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCATTGTGGTTGCACTCCAAAGTCGACTTCAAGTGTCAAAGAAAAGAAAATTTCAGAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCCTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGTTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTTCGTCTAACCCCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAAATGGTAATCTCTAACAAATTGGCTGAAAAGCTCCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCCGATCTAAGCCTGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCGCTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTGCATTCAAGTGCCTTCACGTGAGCTAATAGTGGATAGGCCATTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTATGCCCTTACAAAAATCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTTCTGTGGTGCGAGAGGTATTGGGGATGATGGTTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGTTCTTCTGGAGAAGGATGAGACTTTAGCAATAAAAAATCAATGGATGACGCTTTTGAAGGAAGCAAAAAGGTTGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGAAAACAATAATCATGATCATGAGATAGAAAATGACTATGATGACGATTACCACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTGTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAATAACGTAGATATTAGTAATGATGCAGATGGAGGTCACATAGAACCTTGGTGATGGTTAATTTAATTTGTTTGGAAGGATCATCAAAATATTTCTATTATTAATGGAAACAAAGGGCCCCTTCAGAATTCAGAAAAAGAACTTTGTGAATACTGAACATAAAAGATTGACCTGGTAAGCTGAAAAAATCTTTAAGTGAAGCCTGATGATCTATAGGAAGGGCTGAAGCTACTGGTTCTAGTCTCATCTGTTTGTGCATGGGCTATTAAACCTCTGCTGATATACCATTATACCTTCTCAAGCTGTATAATTCAAACCTGCTTGACCTGTTCTTTTGTCCCCTCAAAATGTACAATTAGTGTTAGACCTTTCTGTGAAGTCTAGACGAAACTTCTCCCTAATCAAAAGGGATGTCTGGGATATAAGTTCTAACTCTTACTTATGCATACCATTAGATAAATTAAGACAACAAATTCATGTTAATGAATAATGTAAATAGTTGGGTATAGTTTGGTAGCTCATTCTACCTCGAGGTCTCTTGCTGTGAATGTATTCAGAATTTGTTCCCCCCACTGG

mRNA sequence

GCTCTTCAGTTCTTCGCACCTTTCAACAGGTGGTAAAGAACCTCAAGATAGTTGCTTGCAGTTTAATCTGTTGATGCCAGACAGTAGCATCCCCCATCTGGTGGGTGCTCTTGAGTTAGAGTTGGAAGAATGATATGTGTCATCTTCTTTAGATTAATTTGATGAATCTGTTTACCTATTGTAATCTAAAAGCCCTTCCATTTATACAAAACTGAAAAATGGCTTTATGTTCTCATTTCTTGACCCCTACGGACTGGCATGTAACATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCATTGTGGTTGCACTCCAAAGTCGACTTCAAGTGTCAAAGAAAAGAAAATTTCAGAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCCTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGTTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTTCGTCTAACCCCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAAATGGTAATCTCTAACAAATTGGCTGAAAAGCTCCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCCGATCTAAGCCTGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCGCTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTGCATTCAAGTGCCTTCACGTGAGCTAATAGTGGATAGGCCATTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTATGCCCTTACAAAAATCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTTCTGTGGTGCGAGAGGTATTGGGGATGATGGTTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGTTCTTCTGGAGAAGGATGAGACTTTAGCAATAAAAAATCAATGGATGACGCTTTTGAAGGAAGCAAAAAGGTTGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGAAAACAATAATCATGATCATGAGATAGAAAATGACTATGATGACGATTACCACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTGTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAATAACGTAGATATTAGTAATGATGCAGATGGAGGTCACATAGAACCTTGGTGATGGTTAATTTAATTTGTTTGGAAGGATCATCAAAATATTTCTATTATTAATGGAAACAAAGGGCCCCTTCAGAATTCAGAAAAAGAACTTTGTGAATACTGAACATAAAAGATTGACCTGGTAAGCTGAAAAAATCTTTAAGTGAAGCCTGATGATCTATAGGAAGGGCTGAAGCTACTGGTTCTAGTCTCATCTGTTTGTGCATGGGCTATTAAACCTCTGCTGATATACCATTATACCTTCTCAAGCTGTATAATTCAAACCTGCTTGACCTGTTCTTTTGTCCCCTCAAAATGTACAATTAGTGTTAGACCTTTCTGTGAAGTCTAGACGAAACTTCTCCCTAATCAAAAGGGATGTCTGGGATATAAGTTCTAACTCTTACTTATGCATACCATTAGATAAATTAAGACAACAAATTCATGTTAATGAATAATGTAAATAGTTGGGTATAGTTTGGTAGCTCATTCTACCTCGAGGTCTCTTGCTGTGAATGTATTCAGAATTTGTTCCCCCCACTGG

Coding sequence (CDS)

ATGGCTTTATGTTCTCATTTCTTGACCCCTACGGACTGGCATGTAACATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCATTGTGGTTGCACTCCAAAGTCGACTTCAAGTGTCAAAGAAAAGAAAATTTCAGAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCCTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGTTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTTCGTCTAACCCCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAAATGGTAATCTCTAACAAATTGGCTGAAAAGCTCCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCCGATCTAAGCCTGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCGCTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTGCATTCAAGTGCCTTCACGTGAGCTAATAGTGGATAGGCCATTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTATGCCCTTACAAAAATCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTTCTGTGGTGCGAGAGGTATTGGGGATGATGGTTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGTTCTTCTGGAGAAGGATGAGACTTTAGCAATAAAAAATCAATGGATGACGCTTTTGAAGGAAGCAAAAAGGTTGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGAAAACAATAATCATGATCATGAGATAGAAAATGACTATGATGACGATTACCACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTGTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAATAACGTAGATATTAGTAATGATGCAGATGGAGGTCACATAGAACCTTGGTGA

Protein sequence

MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLPCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNNHDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGHIEPW*
Homology
BLAST of CSPI04G03490 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.5e-59
Identity = 159/431 (36.89%), Postives = 224/431 (51.97%), Query Frame = 0

Query: 54  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 113
           +++K  +    D    +  K + V KL  +L+++P   + L  L + R  L L R R L+
Sbjct: 53  AAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 112

Query: 114 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEK 173
           +++ R+P +F++              +Y  L  RLTPAA  +   +  L+         K
Sbjct: 113 ALLRRFPGVFDVVE----------EGVY-SLRFRLTPAAERLYLDELRLRNESEGLAVAK 172

Query: 174 LQKLLMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 233
           L+KLLM+S   RIL+ K+ HL  DL LPP FR  +C  YP+ FR V    G ALEL  WD
Sbjct: 173 LRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWD 232

Query: 234 PELA--------KPLPCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 293
           PELA        +     +   R LI+DRPLKFN +RL KGL L R     + +F+++P 
Sbjct: 233 PELAVSAAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPY 292

Query: 294 VCPYKNPASELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMI 353
           + PY +  S L   S E EK AC VV E+L + VEKRTL+DHLTHFR++F     LRGMI
Sbjct: 293 ISPYAD-FSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMI 352

Query: 354 VRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKA 413
           +RHP++FYVS KG RDSVFL E + D   L+EK++ + +K +   L+   +  RR     
Sbjct: 353 IRHPDMFYVSFKGDRDSVFLREAYKD-SQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGT 412

Query: 414 QIYDSKYGNDHENNNHDHEIENDY-DDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDF 473
                  G + E  N   +  +   D++Y D  E L   EDL  E       + +  GD 
Sbjct: 413 -------GEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGDG 463

Query: 474 WTTNNVDISND 476
           W   N D   D
Sbjct: 473 WFGENDDSPPD 463

BLAST of CSPI04G03490 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.3e-58
Identity = 154/430 (35.81%), Postives = 220/430 (51.16%), Query Frame = 0

Query: 54  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 113
           +++K  +    D    +  K + V KL  +L+S P   + L  L + R  L L R R L+
Sbjct: 59  AAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 118

Query: 114 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEK 173
           +++ R+P +FE+              +Y  L  RLTPAA  +   +  LK         K
Sbjct: 119 ALLKRFPGVFEVVE----------EGVY-SLRFRLTPAAERLYLDELHLKNESEGLAVTK 178

Query: 174 LQKLLMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 233
           L+KLLM+S   RIL+ K+ HL  DL LPP FR  +C  YP+ FR V    G  LEL  WD
Sbjct: 179 LRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWD 238

Query: 234 PELAKPLPCI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 293
           PELA     +        +   R LI+DRPLKFN ++L +GL L R     + +F+++P 
Sbjct: 239 PELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPY 298

Query: 294 VCPYKNPASELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMI 353
           + PY +  S L   S E EK AC VV E+L + +EKRTL+DHLTHFR++F     LRGM+
Sbjct: 299 ISPYSD-FSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGML 358

Query: 354 VRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKA 413
           +RHP++FYVSLKG RDSVFL E + +   L+EK + + +K +   L+   +  RR     
Sbjct: 359 IRHPDMFYVSLKGDRDSVFLREAYKN-SQLVEKSKLVLLKEKMRALVAVPRFPRRGVPAT 418

Query: 414 QIYDSKYGNDHENNNHDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFW 473
                +     +  +   ++E+D D       E L   EDL  E       + +  GD W
Sbjct: 419 SEEADRTNGAAQMLSEGSDVEDDED-------EGLSDMEDLISEISGGKSDTDYHWGDGW 468

Query: 474 TTNNVDISND 476
              N D   D
Sbjct: 479 VGENDDSPPD 468

BLAST of CSPI04G03490 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-56
Identity = 140/392 (35.71%), Postives = 213/392 (54.34%), Query Frame = 0

Query: 54  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 113
           +++K  +  + D    +  K + V  +  +L+S+P   + L  L K R  L L + R  +
Sbjct: 74  AAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFI 133

Query: 114 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEK 173
           +++ +YP +FE+             +    L  ++T  A  +   +  ++  + + L  K
Sbjct: 134 ALLRKYPGVFEI-----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVK 193

Query: 174 LQKLLMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 233
           L+KL+M+S   RILL K+ HL  DL LP  FR  +C  YP+ FR V T  G ALEL  WD
Sbjct: 194 LRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWD 253

Query: 234 PELAKPLPCI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 293
           PELA     +        +   R LI+DRP KFN ++L +GLNL ++    + +FRD+  
Sbjct: 254 PELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQY 313

Query: 294 VCPYKNPASELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMI 353
           + PYK+  S L   +LE EK AC V+ E+L +  EKRTL+DHLTHFR++F    +LRGM+
Sbjct: 314 ISPYKD-FSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGML 373

Query: 354 VRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRR----- 413
           +RHP+LFYVSLKG+RDSVFL E + +   L++KD    +K +   L+   +  RR     
Sbjct: 374 IRHPDLFYVSLKGERDSVFLREAYRN-SELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 433

Query: 414 --EKKKAQIYDSKYGNDHENNNHDHEIENDYD 431
             E ++ +I  S    + E    D E  +D D
Sbjct: 434 DEEGREVEIDGSDADGEEEEEESDAEEWSDVD 452

BLAST of CSPI04G03490 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.1e-18
Identity = 85/347 (24.50%), Postives = 162/347 (46.69%), Query Frame = 0

Query: 67  HAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPSIFELF 126
           H ++ ++ + V  L   ++ +P   IP+  +SK      +     +   + ++PSIFE F
Sbjct: 42  HILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV--STKIAHFLRKFPSIFEEF 101

Query: 127 SIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLMLSSHHRI 186
             P    P            RLTP A  + +Q+  +    ++ L ++L+KL+++S  + +
Sbjct: 102 VGPEYNLP----------WFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVL 161

Query: 187 LLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTS---YGRALELVSWDPELAKPLPCI 246
            LS +  +   L LP ++      +    FR VD      G A++    D  L+      
Sbjct: 162 PLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNA 221

Query: 247 QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK-----NPASELAK 306
               R  +    ++F L    KG  L+   +++L++F+ LP V PY      +P+S++A 
Sbjct: 222 MKKRRGEVSLEEIEFPLFP-SKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA- 281

Query: 307 ESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKG 366
                EKR    + E+L + VE       L   +K FGLP K+     RHP++FY+S+K 
Sbjct: 282 -----EKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKN 341

Query: 367 QRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKA 406
           +  +  L E + DK   +E    L ++ +++ L+K ++ + + ++ +
Sbjct: 342 KTCTAILREPYRDK-ASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368

BLAST of CSPI04G03490 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-17
Identity = 94/378 (24.87%), Postives = 178/378 (47.09%), Query Frame = 0

Query: 59  VRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLP-RPRSLLSMIH 118
           VR    D +     K R V K   L+LS+P H I + +L      L L  +     + + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 119 RYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKL 178
           ++P +FE++  P          +   L  RLT  A    + + +  +        +L+KL
Sbjct: 107 KFPHVFEIYEHP----------VQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 166

Query: 179 LMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVD--TSYGRALELVSWDPE 238
           +M+S+  RI L  +     +  LP +F   +   +P+ FR +D   +  + +E+V  DP 
Sbjct: 167 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 226

Query: 239 LAKPLPCIQVPSREL------IVDRPLKFN-LLRLRKGLNLKRTHQEFLIKFRDLPDVCP 298
           L+    C     RE+      I    ++F+ ++    G  + +  +  + K++ LP   P
Sbjct: 227 LS---ICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSP 286

Query: 299 YKNPASELAKESLES----EKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGM 358
           Y++  S     S+E+    EKR+ + + E+L + VEK+  ++ + HFR    LP KL+  
Sbjct: 287 YED-ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEF 346

Query: 359 IVRHPELFYVSLK---GQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRRE 418
           +++H  +FY+S +   G+  +VFL EG+  +G L+E ++    + +   L+  +   R+ 
Sbjct: 347 LLQHQGIFYISTRGNYGKLHTVFLREGY-KRGELVEPNDVYLARRRLAELVLMSP--RKA 406

Query: 419 KKKAQIYDSKYGNDHENN 420
           K  A++   + G D E++
Sbjct: 407 KVDAELVRYRDGLDDEDD 407

BLAST of CSPI04G03490 vs. ExPASy TrEMBL
Match: A0A0A0KU86 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 SV=1)

HSP 1 Score: 969.5 bits (2505), Expect = 5.1e-279
Identity = 481/484 (99.38%), Postives = 483/484 (99.79%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480
           HDHE+ENDYDDDY DGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 484

BLAST of CSPI04G03490 vs. ExPASy TrEMBL
Match: A0A5A7TP08 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003590 PE=4 SV=1)

HSP 1 Score: 927.9 bits (2397), Expect = 1.7e-266
Identity = 461/484 (95.25%), Postives = 470/484 (97.11%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL S FLTPTDWH  SLSSNLLSGSPLWLHSKVDFKCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSRFLTPTDWH-ASLSSNLLSGSPLWLHSKVDFKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD+CPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDICPYKTPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKE KR+RREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480
           HDHE+ENDYDD+Y DGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISND DG H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDGSH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

BLAST of CSPI04G03490 vs. ExPASy TrEMBL
Match: A0A1S3BYB2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4 SV=1)

HSP 1 Score: 924.1 bits (2387), Expect = 2.4e-265
Identity = 460/484 (95.04%), Postives = 468/484 (96.69%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL SHFLTP DWH  SLSSNLLSGSPLWLHSKVD KCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSHFLTPADWH-ASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKE KR+RREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480
           HDHE+ENDYDD+Y DGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISND D  H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

BLAST of CSPI04G03490 vs. ExPASy TrEMBL
Match: A0A5D3D0F7 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001190 PE=4 SV=1)

HSP 1 Score: 924.1 bits (2387), Expect = 2.4e-265
Identity = 460/484 (95.04%), Postives = 468/484 (96.69%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL SHFLTP DWH  SLSSNLLSGSPLWLHSKVD KCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSHFLTPADWH-ASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKE KR+RREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480
           HDHE+ENDYDD+Y DGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISND D  H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

BLAST of CSPI04G03490 vs. ExPASy TrEMBL
Match: A0A6J1GVP1 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 1.6e-245
Identity = 428/485 (88.25%), Postives = 453/485 (93.40%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL S FLTP DWHVTSLSSNLL G+PLWLHS V  K QRKENF+T YTLTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AAS+AKQDS+LK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PC+QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQWM LL E KR+RREK+KAQIYDS+YGNDHEN++
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNN-VDISNDADGG 480
           HDHE+E DYDDDY DGFESLFQYEDLDFEDE S +PS  SNGDFWTTNN  DI N  +GG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPW 485
           HI+PW
Sbjct: 481 HIKPW 485

BLAST of CSPI04G03490 vs. NCBI nr
Match: XP_004152293.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >XP_031739932.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >KGN53093.1 hypothetical protein Csa_015066 [Cucumis sativus])

HSP 1 Score: 969.5 bits (2505), Expect = 1.0e-278
Identity = 481/484 (99.38%), Postives = 483/484 (99.79%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480
           HDHE+ENDYDDDY DGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 484

BLAST of CSPI04G03490 vs. NCBI nr
Match: KAA0044608.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 927.9 bits (2397), Expect = 3.5e-266
Identity = 461/484 (95.25%), Postives = 470/484 (97.11%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL S FLTPTDWH  SLSSNLLSGSPLWLHSKVDFKCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSRFLTPTDWH-ASLSSNLLSGSPLWLHSKVDFKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD+CPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDICPYKTPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKE KR+RREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480
           HDHE+ENDYDD+Y DGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISND DG H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDGSH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

BLAST of CSPI04G03490 vs. NCBI nr
Match: XP_008453967.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901446.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901447.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >TYK16978.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 924.1 bits (2387), Expect = 5.0e-265
Identity = 460/484 (95.04%), Postives = 468/484 (96.69%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL SHFLTP DWH  SLSSNLLSGSPLWLHSKVD KCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALSSHFLTPADWH-ASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKE KR+RREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480
           HDHE+ENDYDD+Y DGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISND D  H
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 483

BLAST of CSPI04G03490 vs. NCBI nr
Match: XP_038904265.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 885.2 bits (2286), Expect = 2.6e-253
Identity = 437/484 (90.29%), Postives = 458/484 (94.63%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           M L SHFLTPTDWHVT LSSNLL G+PLWLHS V  K QRKENF T YTLTPCSS+KIVR
Sbjct: 1   MVLSSHFLTPTDWHVTLLSSNLLCGNPLWLHSNVSCKYQRKENFETRYTLTPCSSLKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATK+YPQLCVRLTPAAAS+AKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKVYPQLCVRLTPAAASLAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PC+QVPSRELIVDRPLKFNLLRLRKGLNLKR HQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCLQVPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFD+KGVL++KDETLAIKNQWM LL E KR+R+EKKKA+ YDSKYGN+H+N+N
Sbjct: 361 DSVFLVEGFDEKGVLVKKDETLAIKNQWMKLLMEGKRMRQEKKKARKYDSKYGNEHKNDN 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480
           HDHE+E D+DDDY DGFESLFQYEDLDFEDE S +PS W NGDFW TNNVDI NDADGG 
Sbjct: 421 HDHEMETDFDDDYDDGFESLFQYEDLDFEDERSDLPSNWLNGDFWITNNVDIINDADGGR 480

Query: 481 IEPW 485
           IEPW
Sbjct: 481 IEPW 484

BLAST of CSPI04G03490 vs. NCBI nr
Match: XP_022955645.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >KAG7018490.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 858.2 bits (2216), Expect = 3.4e-245
Identity = 428/485 (88.25%), Postives = 453/485 (93.40%), Query Frame = 0

Query: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60
           MAL S FLTP DWHVTSLSSNLL G+PLWLHS V  K QRKENF+T YTLTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AAS+AKQDS+LK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300
           PC+QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRAC+VVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQWM LL E KR+RREK+KAQIYDS+YGNDHEN++
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEIENDYDDDYHDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNN-VDISNDADGG 480
           HDHE+E DYDDDY DGFESLFQYEDLDFEDE S +PS  SNGDFWTTNN  DI N  +GG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPW 485
           HI+PW
Sbjct: 481 HIKPW 485

BLAST of CSPI04G03490 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 500.0 bits (1286), Expect = 2.2e-141
Identity = 271/442 (61.31%), Postives = 329/442 (74.43%), Query Frame = 0

Query: 53  CSSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSL 112
           CS+ KIVRS SLDRH VK N+ RFVQKL  LLLSKPKHYIP+ IL KCR YL +  P ++
Sbjct: 54  CSAHKIVRSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAI 113

Query: 113 LSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAE 172
           LSMI RYP+IFELF+ P P  P+NATK   QLCVRLT AA+S+A Q+ +LK  IS+KLA 
Sbjct: 114 LSMIRRYPTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLAT 173

Query: 173 KLQKLLMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSW 232
           KLQKLLMLSSH R+LLSKLVH+APD   PPNFRSRLCNDYP+KF+TVDTSYGRALELVS 
Sbjct: 174 KLQKLLMLSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSS 233

Query: 233 DPELAKPLPCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNP 292
           DPELA  +P  +V  R LIVDRPLKF  L LR+GLNLKR HQ FLIKFR+ PDVCPYK  
Sbjct: 234 DPELANQMPSPEV-DRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMS 293

Query: 293 ASELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELF 352
           +  LA ES+E+EKRAC+VVREVLG+ VEKRTLIDHLTHFRK+F LPNKLR +IVRHPELF
Sbjct: 294 SDYLASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELF 353

Query: 353 YVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKK--AQIYDS 412
           YVS+KG RDSVFLVE ++D G LL+KDE L I+ + + L++E KR+RRE+++  A + D 
Sbjct: 354 YVSIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDK 413

Query: 413 KYGNDHENNNHDHEIENDYDDDYHDGFESLFQYEDLDFE---DENSGVPSIWSNG---DF 472
                 +++    + ++D DD+Y DGFE+LF  EDL  E   DE         NG   ++
Sbjct: 414 SVEEKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDDEAGVNGESVEY 473

Query: 473 WT--TNNVDISNDADGGHIEPW 485
           W+   ++   S+D     +E W
Sbjct: 474 WSRKLSSSGSSSDEANSAVESW 494

BLAST of CSPI04G03490 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 220.3 bits (560), Expect = 3.3e-57
Identity = 140/392 (35.71%), Postives = 213/392 (54.34%), Query Frame = 0

Query: 54  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 113
           +++K  +  + D    +  K + V  +  +L+S+P   + L  L K R  L L + R  +
Sbjct: 74  AAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFI 133

Query: 114 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEK 173
           +++ +YP +FE+             +    L  ++T  A  +   +  ++  + + L  K
Sbjct: 134 ALLRKYPGVFEI-----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVK 193

Query: 174 LQKLLMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 233
           L+KL+M+S   RILL K+ HL  DL LP  FR  +C  YP+ FR V T  G ALEL  WD
Sbjct: 194 LRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWD 253

Query: 234 PELAKPLPCI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 293
           PELA     +        +   R LI+DRP KFN ++L +GLNL ++    + +FRD+  
Sbjct: 254 PELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQY 313

Query: 294 VCPYKNPASELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMI 353
           + PYK+  S L   +LE EK AC V+ E+L +  EKRTL+DHLTHFR++F    +LRGM+
Sbjct: 314 ISPYKD-FSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGML 373

Query: 354 VRHPELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRR----- 413
           +RHP+LFYVSLKG+RDSVFL E + +   L++KD    +K +   L+   +  RR     
Sbjct: 374 IRHPDLFYVSLKGERDSVFLREAYRN-SELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 433

Query: 414 --EKKKAQIYDSKYGNDHENNNHDHEIENDYD 431
             E ++ +I  S    + E    D E  +D D
Sbjct: 434 DEEGREVEIDGSDADGEEEEEESDAEEWSDVD 452

BLAST of CSPI04G03490 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 123.2 bits (308), Expect = 5.6e-28
Identity = 105/358 (29.33%), Postives = 174/358 (48.60%), Query Frame = 0

Query: 54  SSIKIV--RSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRS 113
           SS+K+V  +   LD    +  + +   +++  +L++P   IPL  L K R  L L     
Sbjct: 32  SSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK 91

Query: 114 LLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLA 173
             S +   PS+FE++     P      K  P   +R TP   +   ++  +       L 
Sbjct: 92  --SFVEMNPSLFEIYYDRIKP------KSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLV 151

Query: 174 EKLQKLLMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFR-TVDTSYGRA-LEL 233
            KL +LLM++    I   KLVH+  D   P +F  +L   YP  FR T     G++ LEL
Sbjct: 152 SKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLEL 211

Query: 234 VSWDPELAKPLPCIQVPSRELIVDRPLKFNL-LRLRKGLNLKRTHQEFLIKFRDLPDVCP 293
           VSW+P+ AK    ++     L     ++ N  ++L  G  L++  +E+   + +   + P
Sbjct: 212 VSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYISP 271

Query: 294 YKNPASELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRH 353
           Y++  S L + S E EKR   VV E+L + + KR  +  L  F  +F   N    +  RH
Sbjct: 272 YED-VSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRH 331

Query: 354 PELFYVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQ 407
             +FY+SLKG   +  L E + D   L+++D  LAIK++++ LL+E  + R+++ K Q
Sbjct: 332 SGIFYLSLKGGIKTAVLREAYKD-DELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQ 379

BLAST of CSPI04G03490 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-27
Identity = 110/388 (28.35%), Postives = 181/388 (46.65%), Query Frame = 0

Query: 56  IKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSM 115
           +K V+ R LD   V+    R V  L+ ++ + P   +P+  L   RG L LP+   L + 
Sbjct: 37  LKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAF 96

Query: 116 IHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQ 175
           I RYP+IF    + +       T +    C  LT     +  ++ D+  V    +  +L 
Sbjct: 97  IRRYPNIF----VEHCYWDSAGTSV---PCFGLTRETIDLYYEEVDVSRVNERDVLVRLC 156

Query: 176 KLLMLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYG-RALELVSWDP 235
           KLLML+    + L  + HL  DL LP ++R  L   +P+ F  V  S     L+L+ WD 
Sbjct: 157 KLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLKLIHWDE 216

Query: 236 ELAKPLPCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPAS 295
            LA      Q+  RE + +       ++  +G  LKR   E+L +++ LP   PY + AS
Sbjct: 217 HLA----VSQMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPYVD-AS 276

Query: 296 ELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYV 355
            L   +  SEKR   V  E+L + + K+T   ++++ RK F LP K   +  RHP +FY+
Sbjct: 277 HLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYI 336

Query: 356 SLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEA----------KRLRREKKK 415
           S+K    +V L E +D +  L+EK   + ++ ++  ++ E           K +  + +K
Sbjct: 337 SMKCDTQTVILREAYDRRH-LIEKHPLVEVREKFANMMNEGFLDRSRGLYQKSVEADLEK 396

Query: 416 AQIYDSKYGNDHENNNHDHEIENDYDDD 433
             I  S      E    D+ + + YD D
Sbjct: 397 NNIKTSYPVWSDEEEELDNNLISGYDSD 411

BLAST of CSPI04G03490 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 116.7 bits (291), Expect = 5.2e-26
Identity = 94/348 (27.01%), Postives = 172/348 (49.43%), Query Frame = 0

Query: 60  RSRSLDRHAVKHNKTRFVQKLIILLLSKPK-HYIPLHILSKCRGYLSLPRPRSLLSMIHR 119
           R   LD+   +  K   + ++  L+ SK +  ++ L ++S+ +  + L    ++ + I +
Sbjct: 70  RDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGL--NVNVGAFIGK 129

Query: 120 YPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLL 179
           YP  FE+F+ P+             LC ++T     +  ++ ++         ++++KLL
Sbjct: 130 YPHAFEIFTHPFS----------KNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLL 189

Query: 180 MLSSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPE--- 239
           +LS H  + +  L  +  +L LP +FR  +   Y  +FR VD      LELV  D E   
Sbjct: 190 LLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDL---ETLELVDRDDESLC 249

Query: 240 LAKPLPCIQVPSRELIVDRPLKFNL---LRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNP 299
           +AK     +V  RE  + +  + N    + L  G  +++  +E L  ++ +P V PY   
Sbjct: 250 VAKVEEWREVEYREKWLSK-FETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDR- 309

Query: 300 ASELAKESLESEKRACSVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELF 359
             E+++     EKR  +V+ E+L + VEK   ++ L HFRKD G+   +R +I++HP +F
Sbjct: 310 -KEISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIF 369

Query: 360 YVSLKGQRDSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRR 401
           YVS KG   ++FL E +  KG L+E +    ++ + + L+    R  R
Sbjct: 370 YVSTKGSSQTLFLREAY-SKGCLIEPNPIYNVRRKMLDLVLLKTRYSR 398

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
B6TTV83.5e-5936.89Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q65XL52.3e-5835.81Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
A0MFS54.7e-5635.71Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q9ZUZ65.1e-1824.50Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Q689D61.9e-1724.87Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Match NameE-valueIdentityDescription
A0A0A0KU865.1e-27999.38PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 S... [more]
A0A5A7TP081.7e-26695.25Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A1S3BYB22.4e-26595.04protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4... [more]
A0A5D3D0F72.4e-26595.04Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A6J1GVP11.6e-24588.25protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 ... [more]
Match NameE-valueIdentityDescription
XP_004152293.11.0e-27899.38protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >XP_031739932.1 pr... [more]
KAA0044608.13.5e-26695.25protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa][more]
XP_008453967.15.0e-26595.04PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901446.1 PR... [more]
XP_038904265.12.6e-25390.29protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 ... [more]
XP_022955645.13.4e-24588.25protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S... [more]
Match NameE-valueIdentityDescription
AT5G62990.12.2e-14161.31Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G01037.13.3e-5735.71Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G63090.15.6e-2829.33Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G48040.12.1e-2728.35Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.25.2e-2627.01Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 59..396
e-value: 1.3E-92
score: 310.2
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 25..448
NoneNo IPR availablePANTHERPTHR31476:SF2UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 25..448

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G03490.1CSPI04G03490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003723 RNA binding