CSPI04G02570 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G02570
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ASCH domain-containing protein
Location	Chr4: 1529124 .. 1534449 (-)
RNA-Seq Expression	CSPI04G02570
Synteny	CSPI04G02570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCGACGGCCATGTTCACCCGGATCATCACCGGTTGAGCTACGAGACTGCCTAGAAGAGCTGCTCAAGTTCACGCTCCAATCTCACATCAATGGAACCCTTGACATAGACCATGATCTAGGGTTTTCTACAGACTTCTCTTCTCACCTTCTCAATCATAATGATTGTCCTGGTACTGAAATTCAAATTATGAATCCTTTGTTTCTAATTTTCGGTAACGGTAGTAGAAATTGATTCTCTTGAACTCGCGTTTTTCTCTGTTGGTTTTGAAATTTACTTGTCGGGAGTCGTTGATTTTGGTAGCGGATTCAGTGGTAAAGGAGAAATGGTCTACTTCTAATTAGATTCTGGAACTTTATGAGTGTAGTTTGTTTTGATTTTAATAAAACGGAACTAAATTAGATTAGTGATTGTAGTTCATGATTCGTTGAAGGACTAAGCTATTATCTGTAATGGGTTGCTCCCATTTCTTTGAGATCTTTGTATTTGGATTCCTCTGTGATATTTCATGGGCATTTTTAATGCTTGTTCGTTTCTGAACAACGCAAACGCGAGATGATATTTATTCTATTTTGGCTTTATATTATCCAAACGTACCTGTTCTCTTTACTTCAGCAAGCATAAGGTTAAACAAACTTTCCTGTTTTTGATTTATATTTTAATATGAATAACAAGAGGAATGAGAAATACTTCTCTTCACACTCGATATATCACATTCTCTATCAGATGTTTCCAGATTGTATAAGGATCTAGTATCCACTCTTTTGAAGTCAGTTTCCAAAGCATCGTGTGGGTCACTAGATGACTTCGAGGACGAAGAAGAAAGTAATGAGATTGCTGAAGGACGAGCTGAATTAGTAAATGCAAGTGCTTTTACTCATATCATTGGTTGATCGAGTTTATAATCGTGACAATTTCCAACACCCATCTCCTATGTCTAATTTAGTTTTTGCTTGTACATCGCAGGTTCTAAAGACAGTAAACTTTGAGCTTCATGTTCAGGAGCCTTTCTTTACTCAGCTAAAAGGTAATTCTGTTATATTTTCTTAACATTCTTAAGCTTGTGTTAGATGGTATTAAAAGTACTGAATATGTAAACAAGATCGTGCAAAAATCAAGCCTCTCTCACTCAAGGGCTCCAAGTACACAGCACACGTTATACCAAAAACTCAATAACCAAGGATTGGCGCACAAAAAGTTATACCTCGAAAACACCCCATGACACCAACTCTGTTATCAAAGTATTTGCTACAAGAAAAGAATCATGTCACTACTTTTATACTGAACTCTGCACTAGGATACCTCTACCTCTTACTCATTTTTCTTTTAAGTAAAGGCTATTCTTACTCTTGAAAGTTGAATTTTTTACCGTGTAAAATCAACTAGTGTACTACAACTACAAATAACCACAAATAGCTTTCATTGCTTAAGAGAGGCTTAACATCTGAATACCTAACTGAGCATCTAGTGACTTGAATCAGTAACCAATGGCATGTCTATTGGCAATTTAGACACAATGTATAGACAAGATGGTATCCTATCAGAGGAGTCTTGAATTCAAATTCCTTCTTATGGATATTAATAGTTTACATGTCAGGTTTTGTTAGTAATATAATAAAAGATATTAGCTTAAGCTTTTGGGTTCACTTTAGTAGTAGTTTTCTTGGGAATCTTGTCTTGTTGATCTATTGGTTTAGTGTTGTGATTTTTGACATTGATTTCTCTTGTGCAATATATAATTGGTTCTAGATGGCCTAAAGAGAGTGGAGGGAAGATGTGCTGCTGGTAATTACAATCGGTATTGCAAGAAACTTTCCCATTATAAAATTGCTTTCTTAGTTACAGTATTGGGGACATTTGAGTGGCTATAGCTGTGAAACATTACATAGATTCTTTGTTGTTATTGGCTCGTTAATTTACAGTTTGGGGAGATAGTCTTGAACTAGACAAAACAACACAAATGTCAAAGTTGCATGTAATTTTATTCTCCAATAATTTTTAACCTCTTTGGTACAGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGTATTAATTCCACAAAAATTCAAAACATTGACATTTCTACACTATATTATTTCCATACAAACTTCTGGAATGCTGTAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCAGAGAGCCTTGATAACGTTCTTCCTGGAGTAAAAACCTTAACAGATGGTAAGATAAAATACCAATGTCTATAATTTTTCGTTTCCTTGGTATTTCATTATCTTGTTCATGATAATTCTTTAATATGAACTTTCTATTTGTTCTTTTGTTCTATAGAATTTTGATATAATCCTTCTTGCCTATTTATTTTTATTATAGCGTAGTAATTCTAAAAGATTATTTGCTTAGTGTACTTTATGACTTTGAAACATTATTTGTTAGTACCTTGTGATATTTTGCTATATTTGTAATTATTTTTTAGAAGTTTTGCCATTTAAAATAATTCTCCTTATGTTATCTCTCTCGTGTGTGTGAAATAATCTAGCTACCATTTGAATATTGTATTGGTTTATGGGGATGAAACTTGTTTCAGGTGTTCAAATATACAGGAACTTTTACTCTGAAGAGAAAGAACTGTCCAATGGTGTTCTTGGGATTCATGTCAAAAAATCTGTTGCCCAGCCATACATTATTTTGGCCAGAATCATATCTGTGAGTTTTCTTGCCTCCCTACTTTTCCTTACCTGCATCTTTGCTGCGATGGCCAACATAACAACACAAAAAACGGTAAGAAACAATCAATTTTCAACTTAGTATATTGTTACCTATATATTTTCTTTTTCATTTTCATGTATTGACATCCAAACTTTTGATAATGAAACAATCATCAACAATATTCACAACAATGATCGGTATTAAGTAAGATCATAACTTGAAAAAACTAGTTATTGCAAAATAGCTACATTGCTCCTGAAAATAGGGAAATTTATCCCATCTTCCTATGTAAACAGAAAAAAATTTAAGCTTGGGTTGGCAGGTAGGATAAATCATCATGGATTGGCCTAATCATAAAGGACATGATGTGGTAAAGGGCTTAGAAGGAATGAGTTCAATTCATCGTGACCAGCTATCAAGGATTTAATGACCTACGAGTTTTCTGGATGCCCAAATGTTGTAGGGAAATTTATCCCATCTTCCTATGTAAACAGAAAAAAATTTAAGCTTGGGTTGGCAGGTAGGATAAATCATCATGGATTGGCCTAATCATAAAGGACATGATGTGGTAAAGGGCTTAGAAGGAATGAGTTCAATTCATCGTGACCAGCTATCAAGGATTTAATGACCTACGAGTTTTCTGGATGCCCAAATGTTGAAGGCTTAGATGTGTTGTTTGTGAGATTGGACATCTCAACTAGGTTCACACTCCCATAGTACCCTCATCATATCCAAAATACAAGAACAATACCAGTCATGAAAAGACCAAAGTAACAACCAAAATAACAATATAAACTACGTACATTAGACAGAAGAAGCAAGGCTGAAAAATAAAAACTTAATGGTAGAAATACATAATAAAGCTCGTCAAAACTACAAAAGCACAAATTCTGAACTAGCAATTGGGGGAAACTTCATTGAATCTCTTTAGGTGAAGGTAGTCCAATTGAGGCAGATATCCTGTATGGAGTAATCTTTGAATTTTGTATTTGAAGAACACCAAGCTGCTGCATTTCTTTTTAGAATTGTCTACGATGTCAACTCAATCCTTTTTTTAATCATGGAAGATGTCAACCCAATCCTTTTTTGAGCATAGAAAAACTATCGAAGCTGTTTTGAGCATAGAAAATATGCTAAACCAACAATTAGATGAGAAGGGATGGAAAATGAATGTGTATTAGGAGCTCACTGTTTTCAAGCAAAGGGGGCACACGGAAGGCAGCAAACACATATTGGGAAGCTTCCTTTGCATAGTCTTAAAACAGTTTAGAACCCACCACCATAATCTAAAACAGGACATTTATTCTCCTTGCACTGCTGGTTTTCTAAAGTGCTTTAAAGTAATCTTTTTTCAAAGGTAAAGAGGGAGAGAGGGGTCCCCTTTTCTTGGACCCCTTCTTTCCCCTCTTTTTCTAAAGTGCTTCAAAGTTATCTTTTTTTTCAAAACTGTTAGTTAAGTACTATTCTCAAAGAGAGGGGGTCCCAAGTACTATAAACTTGGATCCTATTGTAGTTCTTCATTGTAAATAGTGATTCTTGTTAGGAGTATCCTAACAGTTTCTCCACAAAAAATACTCAAAGAAATCTATGCTCAATAAAAAATATATATATATATATTCAGATGTGTATTCTGTTCAATATATAATATAATTAGAGATATATAGCAGTTGCGTTTTAAAGTCTAGAGTTGGTACGTTGGGATCACGAAGTTTACGTTTGGATAGTCGAGTTACACATGTTGATTATTAATAAATGTGCATTAAAGAGAGAAGATGAAGTTTTCAATAAAACTACAAACTTGATTGATAATCATTTAACCATATAATGTGAAACCAATACATGTGTGAAAAACAATAAAACACTTCTTTTTTGTACTATACTAAATGGAAAATGACAAGATTGCGTCAGTTGAAGCAGAGATTTGTTTAATATTTCAAATTTTGATTAGTAATTTGATTCCTTTTTTTATCCCAGTCCTATCATGAAAAATAATAACTTTTCTTATTGCATTCTGTGTCTCCATTATCTAAGACACATTTTATTATCTTCTTTTGATAGGCTTATTTTGGTCGTTCGATGATGAAGATTTAAAAGTGCAAAATAAGCTTCTCCTTGGAAGGAATGTATTTGGCTATTTAAAGAAAAAGGTCTAATTGTGTGCGAAACCTAACGCCTCAAACTAATTATGATGTGTTCTAATTTGACGAGTTAGTGTTTAATAACTTAACCTTAATAGTTTTTAGTAGAGATGAGCATAGTAGACCATAAAACCGAGTCGACTAACCAAATCGAAGGTAAGAAGAGGTTGGTCTATGTCGGTTTGGAAAAAATCTAAATCGACGACATTTGTTTAAAAATTTTCAAATGTATAATCTGACGATCATTTACTAGTTTGAACATTTGTAGTTGATGTCAGTTTGAACATTTACTAAATTGACCATAGTTAATTCGGTATTGGTTTAGTT

mRNA sequence

ATGCAGCGACGGCCATGTTCACCCGGATCATCACCGGTTGAGCTACGAGACTGCCTAGAAGAGCTGCTCAAGTTCACGCTCCAATCTCACATCAATGGAACCCTTGACATAGACCATGATCTAGGGTTTTCTACAGACTTCTCTTCTCACCTTCTCAATCATAATGATTGTCCTGATGTTTCCAGATTGTATAAGGATCTAGTATCCACTCTTTTGAAGTCAGTTTCCAAAGCATCGTGTGGGTCACTAGATGACTTCGAGGACGAAGAAGAAAGTAATGAGATTGCTGAAGGACGAGCTGAATTAGTAAATGTTCTAAAGACAGTAAACTTTGAGCTTCATGTTCAGGAGCCTTTCTTTACTCAGCTAAAAGATGGCCTAAAGAGAGTGGAGGGAAGATGTGCTGCTGGTAATTACAATCGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCAGAGAGCCTTGATAACGTTCTTCCTGGAGTAAAAACCTTAACAGATGGTGTTCAAATATACAGGAACTTTTACTCTGAAGAGAAAGAACTGTCCAATGGTGTTCTTGGGATTCATGTCAAAAAATCTGTTGCCCAGCCATACATTATTTTGGCCAGAATCATATCTGCTTATTTTGGTCGTTCGATGATGAAGATTTAAAAGTGCAAAATAAGCTTCTCCTTGGAAGGAATGTATTTGGCTATTTAAAGAAAAAGGTCTAATTGTGTGCGAAACCTAACGCCTCAAACTAATTATGATGTGTTCTAATTTGACGAGTTAGTGTTTAATAACTTAACCTTAATAGTTTTTAGTAGAGATGAGCATAGTAGACCATAAAACCGAGTCGACTAACCAAATCGAAGGTAAGAAGAGGTTGGTCTATGTCGGTTTGGAAAAAATCTAAATCGACGACATTTGTTTAAAAATTTTCAAATGTATAATCTGACGATCATTTACTAGTTTGAACATTTGTAGTTGATGTCAGTTTGAACATTTACTAAATTGACCATAGTTAATTCGGTATTGGTTTAGTT

Coding sequence (CDS)

ATGCAGCGACGGCCATGTTCACCCGGATCATCACCGGTTGAGCTACGAGACTGCCTAGAAGAGCTGCTCAAGTTCACGCTCCAATCTCACATCAATGGAACCCTTGACATAGACCATGATCTAGGGTTTTCTACAGACTTCTCTTCTCACCTTCTCAATCATAATGATTGTCCTGATGTTTCCAGATTGTATAAGGATCTAGTATCCACTCTTTTGAAGTCAGTTTCCAAAGCATCGTGTGGGTCACTAGATGACTTCGAGGACGAAGAAGAAAGTAATGAGATTGCTGAAGGACGAGCTGAATTAGTAAATGTTCTAAAGACAGTAAACTTTGAGCTTCATGTTCAGGAGCCTTTCTTTACTCAGCTAAAAGATGGCCTAAAGAGAGTGGAGGGAAGATGTGCTGCTGGTAATTACAATCGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCAGAGAGCCTTGATAACGTTCTTCCTGGAGTAAAAACCTTAACAGATGGTGTTCAAATATACAGGAACTTTTACTCTGAAGAGAAAGAACTGTCCAATGGTGTTCTTGGGATTCATGTCAAAAAATCTGTTGCCCAGCCATACATTATTTTGGCCAGAATCATATCTGCTTATTTTGGTCGTTCGATGATGAAGATTTAA

Protein sequence

MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDVSRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI*

Homology

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BLAST of CSPI04G02570 vs. ExPASy TrEMBL
Match: A0A0A0KTQ3 (ASCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G010400 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.7e-131
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV
Sbjct: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI 239
           PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI
Sbjct: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI 238

[Close]

BLAST of CSPI04G02570 vs. ExPASy TrEMBL
Match: A0A5D3E1K2 (RNA-binding ASCH domain protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002640 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.0e-116
Identity = 214/236 (90.68%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPG SPVEL DCLEELLKFTLQSHINGTLD+DHDLGF TDFSSHLLNHND PDV
Sbjct: 1   MQRRPCSPGLSPVELEDCLEELLKFTLQSHINGTLDVDHDLGFPTDFSSHLLNHNDRPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVS LLKSVS+ASCGSLDD ED+EE NEIAEGRAEL  VLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSALLKSVSEASCGSLDDLEDKEECNEIAEGRAEL--VLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMM 237
           PGVKTLTDGVQ+YR FYSEEKELSNGVLGIHVKKSV QPYIIL+RIIS  F  S++
Sbjct: 181 PGVKTLTDGVQVYRKFYSEEKELSNGVLGIHVKKSVVQPYIILSRIISVSFLASLL 234

[Close]

BLAST of CSPI04G02570 vs. ExPASy TrEMBL
Match: A0A6J1IYG9 (uncharacterized protein LOC111479615 OS=Cucurbita maxima OX=3661 GN=LOC111479615 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.1e-96
Identity = 190/235 (80.85%), Postives = 202/235 (85.96%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHN----- 60
           MQRRP SPGSSPVEL DCLEELLKFTLQSHI+G L  +HDLG S +F SHLLN +     
Sbjct: 4   MQRRPSSPGSSPVELGDCLEELLKFTLQSHIDGAL--EHDLGLSAEFCSHLLNDDLPRPN 63

Query: 61  -DCPDVSRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNE-IAEGRAELVNVLKTVNFEL 120
            D PDVS+LYKDL STL KSVSKA CGSLDD ED+E+  E I +G AELVNVLKTVNFEL
Sbjct: 64  LDRPDVSKLYKDLASTLWKSVSKAPCGSLDDLEDKEKCKELITQGGAELVNVLKTVNFEL 123

Query: 121 HVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKA 180
           HVQEPFFTQLKDGLK VEGRCAAG+Y RIQ GALILFNKCLLFEVQDVRQYPSF AML+A
Sbjct: 124 HVQEPFFTQLKDGLKTVEGRCAAGDYIRIQPGALILFNKCLLFEVQDVRQYPSFSAMLEA 183

Query: 181 ESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIIS 229
           ESLD VLPGVKTLTDGVQIYRNFYSEEKE SNGVLGIHVKKSV QP +IL+RIIS
Sbjct: 184 ESLDKVLPGVKTLTDGVQIYRNFYSEEKEQSNGVLGIHVKKSVVQPSVILSRIIS 236

[Close]

BLAST of CSPI04G02570 vs. ExPASy TrEMBL
Match: A0A6J1GV12 (uncharacterized protein LOC111457433 OS=Cucurbita moschata OX=3662 GN=LOC111457433 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.2e-93
Identity = 184/235 (78.30%), Postives = 198/235 (84.26%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHN----- 60
           MQRRP SPGSS VEL DCLEELLKFTLQSHI+G L  +HDLG S +F  HLLN +     
Sbjct: 4   MQRRPSSPGSSSVELGDCLEELLKFTLQSHIDGAL--EHDLGLSAEFCYHLLNDDLPRSN 63

Query: 61  -DCPDVSRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNE-IAEGRAELVNVLKTVNFEL 120
            D PD+S+LY DL STL KSVSKA CGSLD+ ED+E+  E I +G AELVNVLKTVNFEL
Sbjct: 64  LDRPDISKLYNDLASTLWKSVSKAPCGSLDNLEDKEKCKELITQGGAELVNVLKTVNFEL 123

Query: 121 HVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKA 180
           HVQEPFFTQLKDGLK VEGRCAAG+Y RIQ GALILFNKCLLFEVQDVRQYPSF AML+A
Sbjct: 124 HVQEPFFTQLKDGLKTVEGRCAAGDYIRIQPGALILFNKCLLFEVQDVRQYPSFSAMLEA 183

Query: 181 ESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIIS 229
           ESLD VLPGVKTLTDGVQIYRNFYSEEKE SNGVLGIHVKKS  QP +IL+RIIS
Sbjct: 184 ESLDKVLPGVKTLTDGVQIYRNFYSEEKEQSNGVLGIHVKKSAVQPSVILSRIIS 236

[Close]

BLAST of CSPI04G02570 vs. ExPASy TrEMBL
Match: A0A6J1CWC5 (uncharacterized protein LOC111015172 isoform X7 OS=Momordica charantia OX=3673 GN=LOC111015172 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-82
Identity = 172/249 (69.08%), Postives = 198/249 (79.52%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLN------H 60
           MQR+  SPG+SPVEL DC+EELLKFTLQSHI+GTL  +HDL  S +F S LL       +
Sbjct: 1   MQRQQFSPGASPVELGDCIEELLKFTLQSHIDGTL--EHDLRLSANFCSQLLYDDTPHLN 60

Query: 61  NDCPDVSRLYKDLVSTLLKSVSKASCGS------LDDFEDEEESNE-IAEGRAELVNVLK 120
           +D P+ SRLYK+L   + KSVSK SCGS      LDD E++EE +E I +G AELV VLK
Sbjct: 61  SDRPECSRLYKNLALAVWKSVSKTSCGSFDNMALLDDLENKEEWDELITQGGAELVKVLK 120

Query: 121 TVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSF 180
           TVN+ELHVQEPFFTQ+K  LK VEGRCAAG+YNR+Q G LILFNKCLL EVQDVRQY SF
Sbjct: 121 TVNYELHVQEPFFTQIKVNLKTVEGRCAAGDYNRVQPGDLILFNKCLLCEVQDVRQYLSF 180

Query: 181 YAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARII 237
            AML+AE LD VLPGVKTL DGVQ+YR FYSEEKELSNGVLGIHVKKSVAQP+I+L+RII
Sbjct: 181 SAMLEAEGLDKVLPGVKTLKDGVQVYRKFYSEEKELSNGVLGIHVKKSVAQPFIVLSRII 240

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: XP_004152147.1 (uncharacterized protein LOC105434383 isoform X2 [Cucumis sativus] >KGN52990.1 hypothetical protein Csa_014567 [Cucumis sativus])

HSP 1 Score: 478.4 bits (1230), Expect = 3.6e-131
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV
Sbjct: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI 239
           PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI
Sbjct: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI 238

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: XP_011653020.1 (uncharacterized protein LOC105434383 isoform X1 [Cucumis sativus])

HSP 1 Score: 464.5 bits (1194), Expect = 5.4e-127
Identity = 238/263 (90.49%), Postives = 238/263 (90.49%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV
Sbjct: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIIS------------ 239
           PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIIS            
Sbjct: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISVSFLASLLFLTC 240

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: TYK29648.1 (RNA-binding ASCH domain protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 214/236 (90.68%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPG SPVEL DCLEELLKFTLQSHINGTLD+DHDLGF TDFSSHLLNHND PDV
Sbjct: 1   MQRRPCSPGLSPVELEDCLEELLKFTLQSHINGTLDVDHDLGFPTDFSSHLLNHNDRPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVS LLKSVS+ASCGSLDD ED+EE NEIAEGRAEL  VLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSALLKSVSEASCGSLDDLEDKEECNEIAEGRAEL--VLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMM 237
           PGVKTLTDGVQ+YR FYSEEKELSNGVLGIHVKKSV QPYIIL+RIIS  F  S++
Sbjct: 181 PGVKTLTDGVQVYRKFYSEEKELSNGVLGIHVKKSVVQPYIILSRIISVSFLASLL 234

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: XP_031739613.1 (uncharacterized protein LOC105434383 isoform X3 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 5.4e-103
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV
Sbjct: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDG 190
           PGVKTLTDG
Sbjct: 181 PGVKTLTDG 189

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: XP_038879108.1 (uncharacterized protein LOC120071108 isoform X3 [Benincasa hispida])

HSP 1 Score: 379.8 bits (974), Expect = 1.7e-101
Identity = 198/258 (76.74%), Postives = 214/258 (82.95%), Query Frame = 0


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCP-- 60
           M+R+P SPGSSPVEL DCLEELL+FTLQSHI+GTL  +HDLG  TDF SHLLNHN  P  
Sbjct: 1   MERQPSSPGSSPVELGDCLEELLQFTLQSHIDGTL--EHDLGLHTDFCSHLLNHNLPPPN 60

Query: 61  ---------------------DVSRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNE-IA 120
                                DVSRLYKDLVS+L KSVSK SCGSLDD ED+EE NE IA
Sbjct: 61  LDRTGACEILLFTLDVSNSLSDVSRLYKDLVSSLRKSVSKPSCGSLDDLEDKEECNELIA 120

Query: 121 EGRAELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLF 180
           +G AELVNVLKTVNFELHV EPFFTQL+DGLKRVEGRCAAG+YNRIQ GALILFNKCLLF
Sbjct: 121 QGGAELVNVLKTVNFELHVHEPFFTQLRDGLKRVEGRCAAGDYNRIQPGALILFNKCLLF 180

Query: 181 EVQDVRQYPSFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSV 235
           EVQDVRQYPSF AMLKAESLD VLPG+KTL DG+QIYR FYSEEKE+SNGVLGIHVKKSV
Sbjct: 181 EVQDVRQYPSFSAMLKAESLDKVLPGIKTLADGIQIYRKFYSEEKEVSNGVLGIHVKKSV 240

[Close]

BLAST of CSPI04G02570 vs. TAIR 10
Match: AT3G03320.1 (RNA-binding ASCH domain protein )

HSP 1 Score: 218.4 bits (555), Expect = 6.3e-57
Identity = 117/227 (51.54%), Postives = 153/227 (67.40%), Query Frame = 0


Query: 4   RPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNH-NDCPDVSR 63
           +P SPG+  V+LR+C+E LL+F+L+SH+N ++    DL  + DF  HLL    D  + S 
Sbjct: 3   QPMSPGTKSVDLRECMESLLRFSLRSHLNESVP-SFDLDLTRDFCLHLLGEATDSTEKSA 62

Query: 64  LYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRA-ELVNVLKTVNFELHVQEPFFT 123
           +YK L + L    S+      D   + E+ +++  G   +L+N+LK VNFELHVQEP+FT
Sbjct: 63  VYKLLATAL----SECLASEGDKNSNLEKYSKLIHGLGYDLINMLKEVNFELHVQEPYFT 122

Query: 124 QLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVLP 183
           QLKDGLK VEGRCA G+Y RI SG  +LFNKCLL EVQDV +Y SF  MLK E L  VLP
Sbjct: 123 QLKDGLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVHRYTSFSEMLKVEGLAKVLP 182

Query: 184 GVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIIS 229
           GV+++ +GVQ+YRNFYSEEKE  NGV+ I V K   QP   LA ++S
Sbjct: 183 GVESIEEGVQVYRNFYSEEKERMNGVVAIRVAKPANQPSAALAGVLS 224

[Close]

BLAST of CSPI04G02570 vs. TAIR 10
Match: AT2G43465.1 (RNA-binding ASCH domain protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41
Identity = 99/250 (39.60%), Postives = 144/250 (57.60%), Query Frame = 0


Query: 13  VELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLL-------------------- 72
           +++RDCL+E++KFTL         ++ D+G + +F S LL                    
Sbjct: 2   IKIRDCLDEMVKFTLD------YCVEFDIGLTGEFCSGLLCGESVLHDGERIESSSYALL 61

Query: 73  -NHNDCPDVSRLYKDLVSTLLKSVSKAS-CGSLDDF-----------EDEEESNEIAEGR 132
              +  PD   LYK L   LLKS+   S CG+ +             +++E S  I +  
Sbjct: 62  HRFSGVPDYP-LYKVLALGLLKSIDSGSFCGTFEKISLGKEVIRLKEKEDEWSKLINQKG 121

Query: 133 AELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRI-QSGALILFNKCLLFEV 192
           +ELVN LK V  EL VQEP F+ +KDG+K VE RC    Y+RI + G++++ NKCL+FEV
Sbjct: 122 SELVNALKDVFSELQVQEPLFSLMKDGIKTVEARCFEEEYDRIRRGGSMVMINKCLMFEV 181

Query: 193 QDVRQYPSFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQ 229
            ++ QY SFY +LKAES + V PG KT+ +G+Q++R  Y  ++E  NGV+ IH+ KSVAQ
Sbjct: 182 LELHQYASFYELLKAESSEKVFPGTKTVEEGMQMFRKLYDTDQENFNGVVAIHLSKSVAQ 241

The following BLAST results are available for this feature:

BLAST of CSPI04G02570 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G02570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTQ3	1.7e-131	100.00	ASCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G010400 PE=4 S...	[more]
A0A5D3E1K2	6.0e-116	90.68	RNA-binding ASCH domain protein, putative isoform 1 OS=Cucumis melo var. makuwa ...	[more]
A0A6J1IYG9	3.1e-96	80.85	uncharacterized protein LOC111479615 OS=Cucurbita maxima OX=3661 GN=LOC111479615...	[more]
A0A6J1GV12	7.2e-93	78.30	uncharacterized protein LOC111457433 OS=Cucurbita moschata OX=3662 GN=LOC1114574...	[more]
A0A6J1CWC5	1.1e-82	69.08	uncharacterized protein LOC111015172 isoform X7 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CSPI04G02570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152147.1	3.6e-131	100.00	uncharacterized protein LOC105434383 isoform X2 [Cucumis sativus] >KGN52990.1 hy...	[more]
XP_011653020.1	5.4e-127	90.49	uncharacterized protein LOC105434383 isoform X1 [Cucumis sativus]	[more]
TYK29648.1	1.2e-115	90.68	RNA-binding ASCH domain protein, putative isoform 1 [Cucumis melo var. makuwa]	[more]
XP_031739613.1	5.4e-103	100.00	uncharacterized protein LOC105434383 isoform X3 [Cucumis sativus]	[more]
XP_038879108.1	1.7e-101	76.74	uncharacterized protein LOC120071108 isoform X3 [Benincasa hispida]	[more]

BLAST of CSPI04G02570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03320.1	6.3e-57	51.54	RNA-binding ASCH domain protein	[more]
AT2G43465.1	1.3e-41	39.60	RNA-binding ASCH domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007374	ASCH domain	PFAM	PF04266	ASCH	coord: 113..202 e-value: 6.8E-7 score: 29.8
None	No IPR available	GENE3D	2.30.130.30	Hypothetical protein.	coord: 109..216 e-value: 1.3E-38 score: 133.6
None	No IPR available	PANTHER	PTHR34204:SF3	ASCH DOMAIN PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 4..238
None	No IPR available	PANTHER	PTHR34204	RNA-BINDING ASCH DOMAIN PROTEIN	coord: 4..238
None	No IPR available	CDD	cd06555	ASCH_PF0470_like	coord: 111..214 e-value: 8.33755E-35 score: 119.267
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 110..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G02570.1	CSPI04G02570.1	mRNA
CSPI04G02570.2	CSPI04G02570.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane