CSPI04G02490 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CACAAACTCCACAAACAAAAACCCTCATCATCTTTTTTCTCTTAATGGGTCTCTCTTTTTTTCTCCTCTCAAACAAACACTTTGATGATCTCCTCTTCCATGGCTTCTCAAACTAACCATTTTTCTTCTCTTAATTCCTTCAATAATCTTATTCATTATCCTGTTCCATGGCTCTCCTCTCTCACTTTAAACACCTCCCCCTGATCAACCATACTACTCCTTCAACCACGGTCCCACCCGTTCCATTCCCGGGTTCTCCGATATGACAATGGTTGCTGCCCTAAACCACTTCTCCAAACACCATCACGGCGGCGCCGACCATCTCATGAATGGTGGTGCTCCACTTTGTAATCAATATTATTATTATTATTATTTAGGGTCTGATAATCCTTATCTAATTTCTCCTGATCCTCCCATGGCGGAAGATGATTCCACTACTAATAGTCTTAATCATGATCAAGCCCCTTCTAATAGAGATGATGGTTGGCTTCAATTAAGTATTGGTGGCAGCGGCAGCGGTGGCAACGTTACCGGACTAAAACGCGATCAACGAGAGTCGATGACATCCGAGAGAAGCTCGGGTTTAGTGGAGCTAGATCTATTACCTGGTAGCGGTCGAGATATCTCTATGAATTATTCTAGATGGGTTTCGGATTTCTCGAGCCCTGAGACTACTACGACGTCGAAAACGGAGACTGGGGCGGAGACAGGAATAGGGTTGCCTTTGTTTTTTGGAACTTCTAGTTCTTCCAACTTTGTACAGCAAGAGATTAATTGGGCATTTAGGCCGGTGACCGGTATTGGCACCGGTGTTCCTTCTTCTTCCTCCCCGTCGACATCGGCCGTGTCATCTTCTTATTCTCTACCGATGAGCGGCCGTCGGAGTTCTTACTTGGGAAGGCCATTAATCCAATTCCAGAGTCTTGGGGTCGACATGGCCACGGCAACGGCCGGGCCGAGTTCGGACGTCAGAATCATAAATCCTCCCCGCCGGCCCCATTCTGGTATATGGTTTACATTAAAAGCCTTAGAAAATCAGTAAGTGTAGAAAAAATTAAAATTTTAAAAAAGATGTATTTATATATATATATTCTTCTTCTTTAATTTCTTATATTAATTATTATATTTCATAATCAAATTATTCTCTAAAATTTTGATTTTGGTTTTGTTAATGCAGAGGAAAAGAGCCATTTTTGCCTCAAATATCAAAAAACTATCTGAGAATCAAGTGAGATTTTCTCTCTCTCTCTCTCTAATTAACCTAATTAAATTTCTCCTTTTTTATTTTTTATTTTTTACTTATTTATTTATTTGCCTTTGACTTTAATATCTCACTCTCTTCTTCTTCCCTTTTTCTTTCTCTTTTCCCCCTAATTTTGATTGAACTTTTAAAGTTGAAACCATAAAAGAATACTTAAAACTTTTTGGATCAATCATCTTTTTTTTTTGTTTTTTCTTTTGAAATGAATAGGGATGAAAAGATGACAGTTAGTTTGGTAATGAAGTACTTGGTTAATAAGCTTCATCTGGATAGCGAATCAGAGGTATTTATATACAATTAAACCTTTTTTTTTTGGTTTAATTAATTTCATTTACTACCCTATGAACATTTTAGGCTTTTATTCATTAGATTTTAATTATGGTGGAATATGATTGATTAATTACCATTAATTAATTGCTTTGTAGTTAATATGATATTTTGCATTTAAAGGTATTATTTGGATTTATGGTTTGGTGTTACTAACTTGATGGAAACATCAAAACTAAAATAGGGCTTCATTTAGGCTGTTCTATATCTTCTATAG CACAAACTCCACAAACAAAAACCCTCATCATCTTTTTTCTCTTAATGGGTCTCTCTTTTTTTCTCCTCTCAAACAAACACTTTGATGATCTCCTCTTCCATGGCTTCTCAAACTAACCATTTTTCTTCTCTTAATTCCTTCAATAATCTTATTCATTATCCTGTTCCATGGCTCTCCTCTCTCACTTTAAACACCTCCCCCTGATCAACCATACTACTCCTTCAACCACGGTCCCACCCGTTCCATTCCCGGGTTCTCCGATATGACAATGGTTGCTGCCCTAAACCACTTCTCCAAACACCATCACGGCGGCGCCGACCATCTCATGAATGGTGGTGCTCCACTTTGTAATCAATATTATTATTATTATTATTTAGGGTCTGATAATCCTTATCTAATTTCTCCTGATCCTCCCATGGCGGAAGATGATTCCACTACTAATAGTCTTAATCATGATCAAGCCCCTTCTAATAGAGATGATGGTTGGCTTCAATTAAGTATTGGTGGCAGCGGCAGCGGTGGCAACGTTACCGGACTAAAACGCGATCAACGAGAGTCGATGACATCCGAGAGAAGCTCGGGTTTAGTGGAGCTAGATCTATTACCTGGTAGCGGTCGAGATATCTCTATGAATTATTCTAGATGGGTTTCGGATTTCTCGAGCCCTGAGACTACTACGACGTCGAAAACGGAGACTGGGGCGGAGACAGGAATAGGGTTGCCTTTGTTTTTTGGAACTTCTAGTTCTTCCAACTTTGTACAGCAAGAGATTAATTGGGCATTTAGGCCGGTGACCGGTATTGGCACCGGTGTTCCTTCTTCTTCCTCCCCGTCGACATCGGCCGTGTCATCTTCTTATTCTCTACCGATGAGCGGCCGTCGGAGTTCTTACTTGGGAAGGCCATTAATCCAATTCCAGAGTCTTGGGGTCGACATGGCCACGGCAACGGCCGGGCCGAGTTCGGACGTCAGAATCATAAATCCTCCCCGCCGGCCCCATTCTGGTATATGGTTTACATTAAAAGCCTTAGAAAATCAAGGAAAAGAGCCATTTTTGCCTCAAATATCAAAAAACTATCTGAGAATCAAGGATGAAAAGATGACAGTTAGTTTGGTAATGAAGTACTTGGTTAATAAGCTTCATCTGGATAGCGAATCAGAGGCTGTTCTATATCTTCTATAG ATGACAATGGTTGCTGCCCTAAACCACTTCTCCAAACACCATCACGGCGGCGCCGACCATCTCATGAATGGTGGTGCTCCACTTTGTAATCAATATTATTATTATTATTATTTAGGGTCTGATAATCCTTATCTAATTTCTCCTGATCCTCCCATGGCGGAAGATGATTCCACTACTAATAGTCTTAATCATGATCAAGCCCCTTCTAATAGAGATGATGGTTGGCTTCAATTAAGTATTGGTGGCAGCGGCAGCGGTGGCAACGTTACCGGACTAAAACGCGATCAACGAGAGTCGATGACATCCGAGAGAAGCTCGGGTTTAGTGGAGCTAGATCTATTACCTGGTAGCGGTCGAGATATCTCTATGAATTATTCTAGATGGGTTTCGGATTTCTCGAGCCCTGAGACTACTACGACGTCGAAAACGGAGACTGGGGCGGAGACAGGAATAGGGTTGCCTTTGTTTTTTGGAACTTCTAGTTCTTCCAACTTTGTACAGCAAGAGATTAATTGGGCATTTAGGCCGGTGACCGGTATTGGCACCGGTGTTCCTTCTTCTTCCTCCCCGTCGACATCGGCCGTGTCATCTTCTTATTCTCTACCGATGAGCGGCCGTCGGAGTTCTTACTTGGGAAGGCCATTAATCCAATTCCAGAGTCTTGGGGTCGACATGGCCACGGCAACGGCCGGGCCGAGTTCGGACGTCAGAATCATAAATCCTCCCCGCCGGCCCCATTCTGGTATATGGTTTACATTAAAAGCCTTAGAAAATCAAGGAAAAGAGCCATTTTTGCCTCAAATATCAAAAAACTATCTGAGAATCAAGGATGAAAAGATGACAGTTAGTTTGGTAATGAAGTACTTGGTTAATAAGCTTCATCTGGATAGCGAATCAGAGGCTGTTCTATATCTTCTATAG MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAEDDSTTNSLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRDISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGIGTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIINPPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESEAVLYLL* Homology
BLAST of CSPI04G02490 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.1e-13 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of CSPI04G02490 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07 Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of CSPI04G02490 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of CSPI04G02490 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06 Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of CSPI04G02490 vs. ExPASy TrEMBL
Match: A0A0A0KYQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G008840 PE=4 SV=1) HSP 1 Score: 599.7 bits (1545), Expect = 6.7e-168 Identity = 300/304 (98.68%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of CSPI04G02490 vs. ExPASy TrEMBL
Match: A0A5A7TLY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002530 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 3.5e-132 Identity = 243/260 (93.46%), Postives = 245/260 (94.23%), Query Frame = 0
BLAST of CSPI04G02490 vs. ExPASy TrEMBL
Match: A0A5D3E134 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002540 PE=4 SV=1) HSP 1 Score: 478.4 bits (1230), Expect = 2.2e-131 Identity = 242/264 (91.67%), Postives = 245/264 (92.80%), Query Frame = 0
BLAST of CSPI04G02490 vs. ExPASy TrEMBL
Match: A0A1S3BXD1 (uncharacterized protein LOC103494623 OS=Cucumis melo OX=3656 GN=LOC103494623 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 5.5e-122 Identity = 238/300 (79.33%), Postives = 241/300 (80.33%), Query Frame = 0
BLAST of CSPI04G02490 vs. ExPASy TrEMBL
Match: A0A6J1I8S9 (protein LAX PANICLE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470706 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 3.4e-79 Identity = 184/309 (59.55%), Postives = 207/309 (66.99%), Query Frame = 0
BLAST of CSPI04G02490 vs. NCBI nr
Match: XP_004152316.2 (uncharacterized protein LOC101223230 isoform X1 [Cucumis sativus]) HSP 1 Score: 597.4 bits (1539), Expect = 6.8e-167 Identity = 299/300 (99.67%), Postives = 299/300 (99.67%), Query Frame = 0
BLAST of CSPI04G02490 vs. NCBI nr
Match: XP_031739902.1 (uncharacterized protein LOC101223230 isoform X2 [Cucumis sativus]) HSP 1 Score: 597.4 bits (1539), Expect = 6.8e-167 Identity = 299/300 (99.67%), Postives = 299/300 (99.67%), Query Frame = 0
BLAST of CSPI04G02490 vs. NCBI nr
Match: KAE8649082.1 (hypothetical protein Csa_014394 [Cucumis sativus]) HSP 1 Score: 492.3 bits (1266), Expect = 3.1e-135 Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0
BLAST of CSPI04G02490 vs. NCBI nr
Match: KAA0044513.1 (uncharacterized protein E6C27_scaffold46G002530 [Cucumis melo var. makuwa]) HSP 1 Score: 481.1 bits (1237), Expect = 7.1e-132 Identity = 243/260 (93.46%), Postives = 245/260 (94.23%), Query Frame = 0
BLAST of CSPI04G02490 vs. NCBI nr
Match: XP_038880904.1 (uncharacterized protein LOC120072580 [Benincasa hispida]) HSP 1 Score: 481.1 bits (1237), Expect = 7.1e-132 Identity = 256/303 (84.49%), Postives = 265/303 (87.46%), Query Frame = 0
BLAST of CSPI04G02490 vs. TAIR 10
Match: AT5G13250.1 (RING finger protein ) HSP 1 Score: 130.6 bits (327), Expect = 2.2e-30 Identity = 98/270 (36.30%), Postives = 132/270 (48.89%), Query Frame = 0
BLAST of CSPI04G02490 vs. TAIR 10
Match: AT1G28080.1 (RING finger protein ) HSP 1 Score: 109.4 bits (272), Expect = 5.3e-24 Identity = 98/273 (35.90%), Postives = 133/273 (48.72%), Query Frame = 0
BLAST of CSPI04G02490 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 ) HSP 1 Score: 58.5 bits (140), Expect = 1.1e-08 Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of CSPI04G02490 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 ) HSP 1 Score: 55.5 bits (132), Expect = 9.0e-08 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of CSPI04G02490 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 ) HSP 1 Score: 55.5 bits (132), Expect = 9.0e-08 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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