CSPI04G02410 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G02410
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Phenylalanine ammonia-lyase
Location	Chr4: 1401792 .. 1402356 (+)
RNA-Seq Expression	CSPI04G02410
Synteny	CSPI04G02410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGCAACCATTTCAAACCCAATTCAAATTTATCCTCTCTCATTATTCCTTACTCTCTGTGCAGTACACTCTTAAATTAAAATGGCCCAAAAGGTTAATGCTAACCAAAATGGTTCAATGGAAAGCTTGTGCAGCAGCCATCAGGATCCACTCAACTGGGGTTTGGCCGCTGATTCCATGAAGGGAAGCCATCTGGATGAGGTCAAGCGGATGGTGGAAGAGTATCGAAGGCCTTTGGTTAAGCTTGGAGGACAAACTCTCACCATTTCTCAGGTTGCTGCCATTGCCACTCGTGATAATGATGTCCTTGTAGAATTGGCCGAGTCTGCAAGGGCCGGTGTCAAAGCTAGCAGCGATTGGGTGATGGAGAGTATGGGTAAAGGTACTGATAGCTATGGTGTCACCACTGGGTTTGGTGCCACTTCCCATAGAAGAACCAATCAAGGTGGAGCTCTTCAAAAGGAGTTGATTCGGTTTTTGAATGCTGGCATCTTTGGAAATGGAAGTGAATCGAATCACACTTTGCCTCACTCTAAATTGATGAAGAAATTGAGTTCTTGTTGA

mRNA sequence

CTCAGCAACCATTTCAAACCCAATTCAAATTTATCCTCTCTCATTATTCCTTACTCTCTGTGCAGTACACTCTTAAATTAAAATGGCCCAAAAGGTTAATGCTAACCAAAATGGTTCAATGGAAAGCTTGTGCAGCAGCCATCAGGATCCACTCAACTGGGGTTTGGCCGCTGATTCCATGAAGGGAAGCCATCTGGATGAGGTCAAGCGGATGGTGGAAGAGTATCGAAGGCCTTTGGTTAAGCTTGGAGGACAAACTCTCACCATTTCTCAGGTTGCTGCCATTGCCACTCGTGATAATGATGTCCTTGTAGAATTGGCCGAGTCTGCAAGGGCCGGTGTCAAAGCTAGCAGCGATTGGGTGATGGAGAGTATGGGTAAAGGTACTGATAGCTATGGTGTCACCACTGGGTTTGGTGCCACTTCCCATAGAAGAACCAATCAAGGTGGAGCTCTTCAAAAGGAGTTGATTCGGTTTTTGAATGCTGGCATCTTTGGAAATGGAAGTGAATCGAATCACACTTTGCCTCACTCTAAATTGATGAAGAAATTGAGTTCTTGTTGA

Coding sequence (CDS)

ATGGCCCAAAAGGTTAATGCTAACCAAAATGGTTCAATGGAAAGCTTGTGCAGCAGCCATCAGGATCCACTCAACTGGGGTTTGGCCGCTGATTCCATGAAGGGAAGCCATCTGGATGAGGTCAAGCGGATGGTGGAAGAGTATCGAAGGCCTTTGGTTAAGCTTGGAGGACAAACTCTCACCATTTCTCAGGTTGCTGCCATTGCCACTCGTGATAATGATGTCCTTGTAGAATTGGCCGAGTCTGCAAGGGCCGGTGTCAAAGCTAGCAGCGATTGGGTGATGGAGAGTATGGGTAAAGGTACTGATAGCTATGGTGTCACCACTGGGTTTGGTGCCACTTCCCATAGAAGAACCAATCAAGGTGGAGCTCTTCAAAAGGAGTTGATTCGGTTTTTGAATGCTGGCATCTTTGGAAATGGAAGTGAATCGAATCACACTTTGCCTCACTCTAAATTGATGAAGAAATTGAGTTCTTGTTGA

Protein sequence

MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTLTISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGNGSESNHTLPHSKLMKKLSSC*

Homology

[Close]

BLAST of CSPI04G02410 vs. ExPASy Swiss-Prot
Match: P45730 (Phenylalanine ammonia-lyase OS=Populus trichocarpa OX=3694 GN=PAL PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-60
Identity = 116/147 (78.91%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 6   NANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTLTISQV 65
           N  QNGS+ESLC + +DPL+WG+AA++MKGSHLDEVKRMV +YR+P+VKLGG+TLTI+QV
Sbjct: 7   NGYQNGSLESLCVNQRDPLSWGVAAEAMKGSHLDEVKRMVADYRKPVVKLGGETLTIAQV 66

Query: 66  AAIATRD-NDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGA 125
           A+IA  D  DV VEL+ESAR GVKASSDWVM+SM KGTDSYGVTTGFGATSHRRT QGGA
Sbjct: 67  ASIAGHDTGDVKVELSESARPGVKASSDWVMDSMDKGTDSYGVTTGFGATSHRRTKQGGA 126

Query: 126 LQKELIRFLNAGIFGNGSESNHTLPHS 152
           LQKELIRFLNAGIFGNG+E+ HTLPHS
Sbjct: 127 LQKELIRFLNAGIFGNGTETCHTLPHS 153

[Close]

BLAST of CSPI04G02410 vs. ExPASy Swiss-Prot
Match: Q01861 (Phenylalanine ammonia-lyase 1 OS=Pisum sativum OX=3888 GN=PAL1 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.6e-59
Identity = 116/153 (75.82%), Postives = 131/153 (85.62%), Query Frame = 0


Query: 9   QNGSMESLCSSH----------QDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQ 68
           +N   ES C ++           DPLNWG+AA++MKGSHLDEVKRMVEEYR+P+V+LGG+
Sbjct: 10  KNNGYESFCVTNAKNNNMKVNSADPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGE 69

Query: 69  TLTISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRR 128
           TLTISQVAAIA  D+ V VEL+ESARAGVKASSDWVMESM KGTDSYGVTTGFGATSHRR
Sbjct: 70  TLTISQVAAIAAHDHGVKVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRR 129

Query: 129 TNQGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           T QGGALQKELIRFLNAGIFGNG+ES+HTLPH+
Sbjct: 130 TKQGGALQKELIRFLNAGIFGNGTESSHTLPHT 162

[Close]

BLAST of CSPI04G02410 vs. ExPASy Swiss-Prot
Match: O23924 (Phenylalanine ammonia-lyase OS=Digitalis lanata OX=49450 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-59
Identity = 116/151 (76.82%), Postives = 128/151 (84.77%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MA  V    +G+    C    DPLNW  AA+ +KGSHLDEVKRMVEE+R+ +VKLGG+TL
Sbjct: 1   MAAVVENGHHGN-NGFCVKQNDPLNWVAAAEELKGSHLDEVKRMVEEFRKTVVKLGGETL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIA RDN+V V+LAES+RAGVKASSDWVMESM KGTDSYGVTTGFGATSHRRT 
Sbjct: 61  TISQVAAIAARDNEVAVQLAESSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLNAGIFGNG+ES HTLPHS
Sbjct: 121 QGGALQKELIRFLNAGIFGNGTESTHTLPHS 150

[Close]

BLAST of CSPI04G02410 vs. ExPASy Swiss-Prot
Match: P45734 (Phenylalanine ammonia-lyase OS=Trifolium subterraneum OX=3900 GN=PAL1 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.8e-58
Identity = 117/161 (72.67%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSH----------QDPLNWGLAADSMKGSHLDEVKRMVEEYRR 60
           +A  +  N     +S C +H           DPLNWG+AA++MKGSHLDEVKRMVEEYR+
Sbjct: 4   VAAAILKNNINDYDSFCLTHANANNMKVNAADPLNWGVAAEAMKGSHLDEVKRMVEEYRK 63

Query: 61  PLVKLGGQTLTISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTG 120
           P+V+LGG+TLTISQVAAIA  D    VEL+ESARAGVKASSDWVMESM KGTDSYGVTTG
Sbjct: 64  PVVRLGGETLTISQVAAIAAHDG-ATVELSESARAGVKASSDWVMESMNKGTDSYGVTTG 123

Query: 121 FGATSHRRTNQGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           FGATSHRRT QGGALQKELIRFLNAGIFGNG+ESNHTLPH+
Sbjct: 124 FGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNHTLPHT 163

[Close]

BLAST of CSPI04G02410 vs. ExPASy Swiss-Prot
Match: O49836 (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon OX=34254 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.7e-58
Identity = 114/144 (79.17%), Postives = 129/144 (89.58%), Query Frame = 0


Query: 8   NQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTLTISQVAA 67
           N NG ME  C   +DPLNWG+AA+SMKGSHLDEVK+MV E+R+P+V+L G+TLTI+QVAA
Sbjct: 3   NGNGKME-FCM--KDPLNWGMAAESMKGSHLDEVKKMVAEFRKPVVQLAGKTLTIAQVAA 62

Query: 68  IATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGALQK 127
           IA RD+ V VELAE+AR GVKASSDWVMESM KGTDSYGVTTGFGATSHRRT QGGALQK
Sbjct: 63  IAARDDGVTVELAEAAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQK 122

Query: 128 ELIRFLNAGIFGNGSESNHTLPHS 152
           ELIRFLNAGIFGNG+E++HTLPHS
Sbjct: 123 ELIRFLNAGIFGNGTETSHTLPHS 143

[Close]

BLAST of CSPI04G02410 vs. ExPASy TrEMBL
Match: G8HZH6 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=PAL PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL
Sbjct: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGNGSESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNGSESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. ExPASy TrEMBL
Match: A0A0A0KVS6 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_4G008770 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL
Sbjct: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGNGSESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNGSESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. ExPASy TrEMBL
Match: A0A0A0KTN3 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_4G008780 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.3e-77
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKVNANQNGSMES CSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL
Sbjct: 1   MAQKVNANQNGSMESFCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGNGSESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNGSESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. ExPASy TrEMBL
Match: A0A5D3E0L3 (Phenylalanine ammonia-lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002490 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 145/151 (96.03%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKV+ANQNGS ESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGG+TL
Sbjct: 1   MAQKVHANQNGSTESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGETL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDV+VELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVVVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGN SESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNESESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. ExPASy TrEMBL
Match: A0A1S3BYN7 (Phenylalanine ammonia-lyase OS=Cucumis melo OX=3656 GN=LOC103494628 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 145/151 (96.03%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKV+ANQNGS ESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGG+TL
Sbjct: 1   MAQKVHANQNGSTESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGETL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDV+VELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVVVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGN SESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNESESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. NCBI nr
Match: XP_004152155.3 (phenylalanine ammonia-lyase-like [Cucumis sativus] >KAE8649079.1 hypothetical protein Csa_015294 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 4.5e-77
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL
Sbjct: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGNGSESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNGSESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. NCBI nr
Match: NP_001295839.1 (phenylalanine ammonia-lyase-like [Cucumis sativus] >AER58180.1 phenylalanine ammonia lyase [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 4.5e-77
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL
Sbjct: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGNGSESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNGSESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. NCBI nr
Match: KAE8649080.1 (hypothetical protein Csa_014690 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 5.9e-77
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKVNANQNGSMES CSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL
Sbjct: 1   MAQKVNANQNGSMESFCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLNAGIFGNGSESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. NCBI nr
Match: XP_008454137.1 (PREDICTED: phenylalanine ammonia-lyase-like [Cucumis melo] >TYK29637.1 phenylalanine ammonia-lyase-like [Cucumis melo var. makuwa])

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 145/151 (96.03%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQKV+ANQNGS ESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGG+TL
Sbjct: 1   MAQKVHANQNGSTESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGETL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDV+VELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVVVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGN SESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNESESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. NCBI nr
Match: KAA0044507.1 (phenylalanine ammonia-lyase-like [Cucumis melo var. makuwa])

HSP 1 Score: 287.7 bits (735), Expect = 6.1e-74
Identity = 144/151 (95.36%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MAQKVNANQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTL 60
           MAQ V ANQNGS+ESLC+SHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGG+TL
Sbjct: 1   MAQNVCANQNGSVESLCNSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGETL 60

Query: 61  TISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120
           TISQVAAIATRDNDV+VELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN
Sbjct: 61  TISQVAAIATRDNDVVVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTN 120

Query: 121 QGGALQKELIRFLNAGIFGNGSESNHTLPHS 152
           QGGALQKELIRFLN+GIFGNGSESNHTLPHS
Sbjct: 121 QGGALQKELIRFLNSGIFGNGSESNHTLPHS 151

[Close]

BLAST of CSPI04G02410 vs. TAIR 10
Match: AT3G53260.1 (phenylalanine ammonia-lyase 2 )

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54
Identity = 106/130 (81.54%), Postives = 113/130 (86.92%), Query Frame = 0


Query: 22  DPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTLTISQVAAIATRDNDVLVELAE 81
           DPLNWGLAAD MKGSHLDEVK+MVEEYRRP+V LGG+TLTI QVAAI+T    V VELAE
Sbjct: 26  DPLNWGLAADQMKGSHLDEVKKMVEEYRRPVVNLGGETLTIGQVAAISTVGGSVKVELAE 85

Query: 82  SARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGNG 141
           ++RAGVKASSDWVMESM KGTDSYGVTTGFGATSHRRT  G ALQ ELIRFLNAGIFGN 
Sbjct: 86  TSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFLNAGIFGNT 145

Query: 142 SESNHTLPHS 152
            E+ HTLP S
Sbjct: 146 KETCHTLPQS 155

[Close]

BLAST of CSPI04G02410 vs. TAIR 10
Match: AT2G37040.1 (PHE ammonia lyase 1 )

HSP 1 Score: 208.8 bits (530), Expect = 3.3e-54
Identity = 103/131 (78.63%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 21  QDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTLTISQVAAIATRDNDVLVELA 80
           +DPLNWG AA+ MKGSHLDEVKRMV E+R+P+V LGG+TLTI QVAAI+T  N V VEL+
Sbjct: 33  EDPLNWGAAAEQMKGSHLDEVKRMVAEFRKPVVNLGGETLTIGQVAAISTIGNSVKVELS 92

Query: 81  ESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGN 140
           E+ARAGV ASSDWVMESM KGTDSYGVTTGFGATSHRRT  G ALQKELIRFLNAGIFG+
Sbjct: 93  ETARAGVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGVALQKELIRFLNAGIFGS 152

Query: 141 GSESNHTLPHS 152
             E++HTLPHS
Sbjct: 153 TKETSHTLPHS 163

[Close]

BLAST of CSPI04G02410 vs. TAIR 10
Match: AT3G10340.1 (phenylalanine ammonia-lyase 4 )

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-49
Identity = 100/143 (69.93%), Postives = 116/143 (81.12%), Query Frame = 0


Query: 8   NQNGSMESLCSSHQDPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTLTISQVAA 67
           NQN  + ++     DPLNW   A+++KGSHLDEVKRMV+EYR+  VKLGG+TLTI QVAA
Sbjct: 5   NQNNHITAVSG---DPLNWNATAEALKGSHLDEVKRMVKEYRKEAVKLGGETLTIGQVAA 64

Query: 68  IATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGALQK 127
           +A       VELAE ARAGVKASS+WVMESM +GTDSYGVTTGFGATSHRRT QGGALQ 
Sbjct: 65  VARGGGGSTVELAEEARAGVKASSEWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQN 124

Query: 128 ELIRFLNAGIFGNGS-ESNHTLP 150
           ELIRFLNAGIFG G+ +++HTLP
Sbjct: 125 ELIRFLNAGIFGPGAGDTSHTLP 144

[Close]

BLAST of CSPI04G02410 vs. TAIR 10
Match: AT5G04230.1 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 85/131 (64.89%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 22  DPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTLTISQVAAIATRDNDVLVELAE 81
           DPLNW +AA+++KGSHL+EVK+MV++YR+  V+LGG+TLTI QVAA+A+      VEL+E
Sbjct: 13  DPLNWNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVAS--GGPTVELSE 72

Query: 82  SARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGNG 141
            AR GVKASSDWVMESM + TD+YG+TTGFG++S RRT+QG ALQKELIR+LNAGIF  G
Sbjct: 73  EARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFATG 132

Query: 142 SES---NHTLP 150
           +E    ++TLP
Sbjct: 133 NEDDDRSNTLP 141

[Close]

BLAST of CSPI04G02410 vs. TAIR 10
Match: AT5G04230.2 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 85/131 (64.89%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 22  DPLNWGLAADSMKGSHLDEVKRMVEEYRRPLVKLGGQTLTISQVAAIATRDNDVLVELAE 81
           DPLNW +AA+++KGSHL+EVK+MV++YR+  V+LGG+TLTI QVAA+A+      VEL+E
Sbjct: 13  DPLNWNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVAS--GGPTVELSE 72

Query: 82  SARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGNG 141
            AR GVKASSDWVMESM + TD+YG+TTGFG++S RRT+QG ALQKELIR+LNAGIF  G
Sbjct: 73  EARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFATG 132

Query: 142 SES---NHTLP 150
           +E    ++TLP
Sbjct: 133 NEDDDRSNTLP 141

The following BLAST results are available for this feature:

BLAST of CSPI04G02410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45730	3.0e-60	78.91	Phenylalanine ammonia-lyase OS=Populus trichocarpa OX=3694 GN=PAL PE=2 SV=1	[more]
Q01861	2.6e-59	75.82	Phenylalanine ammonia-lyase 1 OS=Pisum sativum OX=3888 GN=PAL1 PE=2 SV=1	[more]
O23924	5.7e-59	76.82	Phenylalanine ammonia-lyase OS=Digitalis lanata OX=49450 PE=2 SV=1	[more]
P45734	2.8e-58	72.67	Phenylalanine ammonia-lyase OS=Trifolium subterraneum OX=3900 GN=PAL1 PE=3 SV=1	[more]
O49836	3.7e-58	79.17	Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon OX=34254 PE=2 SV=1	[more]

BLAST of CSPI04G02410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G8HZH6	2.2e-77	99.34	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=PAL PE=2 SV=1	[more]
A0A0A0KVS6	2.2e-77	99.34	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_4G008770 PE=3 SV=1	[more]
A0A0A0KTN3	6.3e-77	98.68	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_4G008780 PE=3 SV=1	[more]
A0A5D3E0L3	1.7e-74	96.03	Phenylalanine ammonia-lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BYN7	1.7e-74	96.03	Phenylalanine ammonia-lyase OS=Cucumis melo OX=3656 GN=LOC103494628 PE=3 SV=1	[more]

BLAST of CSPI04G02410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152155.3	4.5e-77	99.34	phenylalanine ammonia-lyase-like [Cucumis sativus] >KAE8649079.1 hypothetical pr...	[more]
NP_001295839.1	4.5e-77	99.34	phenylalanine ammonia-lyase-like [Cucumis sativus] >AER58180.1 phenylalanine amm...	[more]
KAE8649080.1	5.9e-77	99.34	hypothetical protein Csa_014690 [Cucumis sativus]	[more]
XP_008454137.1	3.6e-74	96.03	PREDICTED: phenylalanine ammonia-lyase-like [Cucumis melo] >TYK29637.1 phenylala...	[more]
KAA0044507.1	6.1e-74	95.36	phenylalanine ammonia-lyase-like [Cucumis melo var. makuwa]	[more]

BLAST of CSPI04G02410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53260.1	1.1e-54	81.54	phenylalanine ammonia-lyase 2	[more]
AT2G37040.1	3.3e-54	78.63	PHE ammonia lyase 1	[more]
AT3G10340.1	1.1e-49	69.93	phenylalanine ammonia-lyase 4	[more]
AT5G04230.1	1.3e-42	64.89	phenyl alanine ammonia-lyase 3	[more]
AT5G04230.2	1.3e-42	64.89	phenyl alanine ammonia-lyase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024083	Fumarase/histidase, N-terminal	GENE3D	1.10.275.10		coord: 13..153 e-value: 1.2E-41 score: 144.8
IPR001106	Aromatic amino acid lyase	PFAM	PF00221	Lyase_aromatic	coord: 60..138 e-value: 1.8E-15 score: 56.5
IPR001106	Aromatic amino acid lyase	PANTHER	PTHR10362	HISTIDINE AMMONIA-LYASE	coord: 16..153
None	No IPR available	PANTHER	PTHR10362:SF41	PHENYLALANINE AMMONIA-LYASE 2	coord: 16..153
IPR008948	L-Aspartase-like	SUPERFAMILY	48557	L-aspartase-like	coord: 22..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G02410.1	CSPI04G02410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009800	cinnamic acid biosynthetic process
biological_process	GO:0006559	L-phenylalanine catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0045548	phenylalanine ammonia-lyase activity
molecular_function	GO:0003824	catalytic activity