CSPI04G02390 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G02390
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Phenylalanine ammonia-lyase
Location	Chr4: 1397267 .. 1397979 (-)
RNA-Seq Expression	CSPI04G02390
Synteny	CSPI04G02390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTACTGCTCTGAGCTTCAATATCTTGCAAATCCTGTCACAAGTCACGTCCAAAGCGCCGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCCTCAAGGAAAACAGCTGAAGCCATCGATATTCTTAAACTCATGTCTTCCACATTCTTAGTTGCTTTATGTCAAGCAATTGACTTGAGGCATTTGGAGGAGAACTTGAAGAGCACGGTGAAAAGCACAGTTAGCCAAGTAGCAAAAAAAGTGTTGACTACCTCTTCCAATGGCGCACTTCATCCATCAAGATTTTGTGAGAAAGATTTACTCAAAGTTGTTGACAGGGAATACACATTTGCATACATTGATGATCCATGCAGTGCCACCTACCCACTTATGCAAAAGCTAAGGCAAATTATTGTTGAGCATGCACTTAAAAACGGCGATAACGAAACAAACGAAAACACCTCAATCTTCCAAAAGATTGGTGCTTTCGAAGAGGAGTTGAAGGCAATCTTACCAAAGGAGGTTGAAAACGTAAGGTTAGCATATGAGAATGGAAACTCTAAAATTGAAAATCAAATCAAGGATTGTAGATCTTACCCATTATACAAATTTGTGAGAGAGGAGTTGGGAACAAGATTGCTAACTGGCGAAAGGGTAATTTCTCCCGGAGAAGAGTGCGAGAAGGTATTCACCGCTTTAAGTCAAGGAAAGATGATTGA

mRNA sequence

ATGGCTTCTTACTGCTCTGAGCTTCAATATCTTGCAAATCCTGTCACAAGTCACGTCCAAAGCGCCGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCCTCAAGGAAAACAGCTGAAGCCATCGATATTCTTAAACTCATGTCTTCCACATTCTTAGTTGCTTTATGTCAAGCAATTGACTTGAGGCATTTGGAGGAGAACTTGAAGAGCACGGTGAAAAGCACAGTTAGCCAAGTAGCAAAAAAAGTGTTGACTACCTCTTCCAATGGCGCACTTCATCCATCAAGATTTTGTGAGAAAGATTTACTCAAAGTTGTTGACAGGGAATACACATTTGCATACATTGATGATCCATGCAGTGCCACCTACCCACTTATGCAAAAGCTAAGGCAAATTATTGTTGAGCATGCACTTAAAAACGGCGATAACGAAACAAACGAAAACACCTCAATCTTCCAAAAGATTGGTGCTTTCGAAGAGGAGTTGAAGGCAATCTTACCAAAGGAGGTTGAAAACGTAAGAGGAGTTGGGAACAAGATTGCTAACTGGCGAAAGGGTAATTTCTCCCGGAGAAGAGTGCGAGAAGGTATTCACCGCTTTAAGTCAAGGAAAGATGATTGA

Coding sequence (CDS)

ATGGCTTCTTACTGCTCTGAGCTTCAATATCTTGCAAATCCTGTCACAAGTCACGTCCAAAGCGCCGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCCTCAAGGAAAACAGCTGAAGCCATCGATATTCTTAAACTCATGTCTTCCACATTCTTAGTTGCTTTATGTCAAGCAATTGACTTGAGGCATTTGGAGGAGAACTTGAAGAGCACGGTGAAAAGCACAGTTAGCCAAGTAGCAAAAAAAGTGTTGACTACCTCTTCCAATGGCGCACTTCATCCATCAAGATTTTGTGAGAAAGATTTACTCAAAGTTGTTGACAGGGAATACACATTTGCATACATTGATGATCCATGCAGTGCCACCTACCCACTTATGCAAAAGCTAAGGCAAATTATTGTTGAGCATGCACTTAAAAACGGCGATAACGAAACAAACGAAAACACCTCAATCTTCCAAAAGATTGGTGCTTTCGAAGAGGAGTTGAAGGCAATCTTACCAAAGGAGGTTGAAAACGTAAGAGGAGTTGGGAACAAGATTGCTAACTGGCGAAAGGGTAATTTCTCCCGGAGAAGAGTGCGAGAAGGTATTCACCGCTTTAAGTCAAGGAAAGATGATTGA

Protein sequence

MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVRGVGNKIANWRKGNFSRRRVREGIHRFKSRKDD*

Homology

[Close]

BLAST of CSPI04G02390 vs. ExPASy Swiss-Prot
Match: O64963 (Phenylalanine ammonia-lyase 1 OS=Prunus avium OX=42229 GN=PAL1 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.2e-82
Identity = 157/195 (80.51%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMSSTFLVALCQ
Sbjct: 463 MASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQ 522

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENL++TVK+TVSQVAK+ LTT  NG LHPSRFCEKDLLKVVDREY FAYIDD
Sbjct: 523 AIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDD 582

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR--- 180
           PCSATYPLMQKLRQ++VEHAL NG+NE N +TSIFQKI AFEEELK +LPKEV++ R   
Sbjct: 583 PCSATYPLMQKLRQVLVEHALTNGENEKNASTSIFQKIVAFEEELKVLLPKEVDSARAAL 642

Query: 181 -----GVGNKIANWR 188
                GV N+I   R
Sbjct: 643 DSGSAGVPNRITECR 657

[Close]

BLAST of CSPI04G02390 vs. ExPASy Swiss-Prot
Match: P45730 (Phenylalanine ammonia-lyase OS=Populus trichocarpa OX=3694 GN=PAL PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.2e-82
Identity = 151/177 (85.31%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVT+HVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMS+TFLVALCQ
Sbjct: 461 MASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVALCQ 520

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKS VK+TVSQV+K+VLTT +NG LHPSRFCEK+LLKVVDREY FAY+DD
Sbjct: 521 AIDLRHLEENLKSAVKNTVSQVSKRVLTTGANGELHPSRFCEKELLKVVDREYVFAYVDD 580

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQ+ V+HAL+NG+NE N +TS+FQKI AFEEELKA+LPKEVE+ R
Sbjct: 581 PCSATYPLMQKLRQVFVDHALENGENEKNFSTSVFQKIEAFEEELKALLPKEVESAR 637

[Close]

BLAST of CSPI04G02390 vs. ExPASy Swiss-Prot
Match: P45735 (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera OX=29760 GN=PAL PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-81
Identity = 150/177 (84.75%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQ+LANPVT+HV+SAEQHNQDVNSLGLISSRKTAEA+DILKLMS+T+LVALCQ
Sbjct: 162 MASYCSELQFLANPVTNHVESAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTYLVALCQ 221

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKSTVK TVS VAKK LT  +NG LHPSRFCEKDLLKVVDRE+ FAYIDD
Sbjct: 222 AIDLRHLEENLKSTVKKTVSHVAKKTLTIGANGELHPSRFCEKDLLKVVDREHVFAYIDD 281

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQK+RQ++VEHAL NG++E N +TSIFQKIGAFEEELKA+LPKEVE+ R
Sbjct: 282 PCSATYPLMQKVRQVLVEHALNNGESEKNGSTSIFQKIGAFEEELKAVLPKEVESAR 338

[Close]

BLAST of CSPI04G02390 vs. ExPASy Swiss-Prot
Match: Q9SMK9 (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum OX=3827 GN=PAL2 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.4e-81
Identity = 150/177 (84.75%), Postives = 165/177 (93.22%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVT+HVQSAEQHNQDVNSLGLISSRKTAEA++ILKLMSSTFLVALCQ
Sbjct: 464 MASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQ 523

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRH+EENLKS VK+TVSQVAK+VLT   NG LHPSRFCEKDLL VV+REY FAYIDD
Sbjct: 524 AIDLRHIEENLKSVVKNTVSQVAKRVLTVGVNGELHPSRFCEKDLLNVVEREYVFAYIDD 583

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLR ++V+HAL+NGD E N +TSIFQKIGAFE+ELK +LPKEVE+VR
Sbjct: 584 PCSATYPLMQKLRHVLVDHALENGDREGNSSTSIFQKIGAFEQELKTLLPKEVESVR 640

[Close]

BLAST of CSPI04G02390 vs. ExPASy Swiss-Prot
Match: O23865 (Phenylalanine ammonia-lyase 1 OS=Daucus carota OX=4039 GN=PAL1 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 9.1e-81
Identity = 150/179 (83.80%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQ+L NPVT+HVQSAEQHNQDVNSLGLISSRKTAEA++ILKLMS+TFLV LCQ
Sbjct: 454 MASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSTTFLVGLCQ 513

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           A+DLRHLEENLKSTVK+TVSQVAKKVLT   NG LHPSRFCE DLL+VVDREY FAYIDD
Sbjct: 514 AVDLRHLEENLKSTVKNTVSQVAKKVLTMGVNGELHPSRFCELDLLRVVDREYIFAYIDD 573

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVRGV 180
           PCSATYPLMQKLRQ++VEHALKNG+ E N +TSIFQKI AFE+ELKA+LPKEVE+ R V
Sbjct: 574 PCSATYPLMQKLRQVLVEHALKNGETEKNLSTSIFQKIAAFEDELKALLPKEVESARAV 632

[Close]

BLAST of CSPI04G02390 vs. ExPASy TrEMBL
Match: G8HZH6 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=PAL PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.5e-90
Identity = 175/177 (98.87%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ
Sbjct: 459 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 518

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKS VKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 519 AIDLRHLEENLKSVVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 578

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGA EEELKAILPKEVENVR
Sbjct: 579 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAXEEELKAILPKEVENVR 635

[Close]

BLAST of CSPI04G02390 vs. ExPASy TrEMBL
Match: A0A0A0KTN3 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_4G008780 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.5e-90
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ
Sbjct: 459 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 518

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKS VKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 519 AIDLRHLEENLKSVVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 578

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQI+VEHALKNGD+ETNENTSIFQKIGAFEEELKAILPKEVENVR
Sbjct: 579 PCSATYPLMQKLRQILVEHALKNGDSETNENTSIFQKIGAFEEELKAILPKEVENVR 635

[Close]

BLAST of CSPI04G02390 vs. ExPASy TrEMBL
Match: A0A0A0KYQ0 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_4G008250 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.5e-90
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ
Sbjct: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKS VKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 61  AIDLRHLEENLKSVVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQI+VEHALKNGD+ETNENTSIFQKIGAFEEELKAILPKEVENVR
Sbjct: 121 PCSATYPLMQKLRQILVEHALKNGDSETNENTSIFQKIGAFEEELKAILPKEVENVR 177

[Close]

BLAST of CSPI04G02390 vs. ExPASy TrEMBL
Match: A0A5D3E147 (Phenylalanine ammonia-lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002480 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKT EAIDILKLMSSTFLVALCQ
Sbjct: 142 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTVEAIDILKLMSSTFLVALCQ 201

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKSTVK+TVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 202 AIDLRHLEENLKSTVKNTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 261

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQI+VEHALKNGDNETN NTSIFQKIGAFEEELKAILPKEVENVR
Sbjct: 262 PCSATYPLMQKLRQILVEHALKNGDNETNANTSIFQKIGAFEEELKAILPKEVENVR 318

[Close]

BLAST of CSPI04G02390 vs. ExPASy TrEMBL
Match: A0A1S3BZ45 (Phenylalanine ammonia-lyase OS=Cucumis melo OX=3656 GN=LOC103494629 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKT EAIDILKLMSSTFLVALCQ
Sbjct: 459 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTVEAIDILKLMSSTFLVALCQ 518

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKSTVK+TVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 519 AIDLRHLEENLKSTVKNTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 578

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQI+VEHALKNGDNETN NTSIFQKIGAFEEELKAILPKEVENVR
Sbjct: 579 PCSATYPLMQKLRQILVEHALKNGDNETNANTSIFQKIGAFEEELKAILPKEVENVR 635

[Close]

BLAST of CSPI04G02390 vs. NCBI nr
Match: XP_004152155.3 (phenylalanine ammonia-lyase-like [Cucumis sativus] >KAE8649079.1 hypothetical protein Csa_015294 [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 2.7e-90
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ
Sbjct: 459 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 518

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKS VKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 519 AIDLRHLEENLKSAVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 578

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR
Sbjct: 579 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 635

[Close]

BLAST of CSPI04G02390 vs. NCBI nr
Match: NP_001295839.1 (phenylalanine ammonia-lyase-like [Cucumis sativus] >AER58180.1 phenylalanine ammonia lyase [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 175/177 (98.87%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ
Sbjct: 459 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 518

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKS VKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 519 AIDLRHLEENLKSVVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 578

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGA EEELKAILPKEVENVR
Sbjct: 579 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAXEEELKAILPKEVENVR 635

[Close]

BLAST of CSPI04G02390 vs. NCBI nr
Match: XP_031739733.1 (phenylalanine ammonia-lyase [Cucumis sativus] >KAE8649078.1 hypothetical protein Csa_014775 [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ
Sbjct: 459 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 518

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKS VKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 519 AIDLRHLEENLKSVVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 578

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQI+VEHALKNGD+ETNENTSIFQKIGAFEEELKAILPKEVENVR
Sbjct: 579 PCSATYPLMQKLRQILVEHALKNGDSETNENTSIFQKIGAFEEELKAILPKEVENVR 635

[Close]

BLAST of CSPI04G02390 vs. NCBI nr
Match: KAE8649076.1 (hypothetical protein Csa_014727 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 2.3e-89
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ
Sbjct: 54  MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 113

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKS VKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 114 AIDLRHLEENLKSEVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 173

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQI+VEHALKNGD+ETNENTSIFQKIGAFEEELKAILPKEVENVR
Sbjct: 174 PCSATYPLMQKLRQILVEHALKNGDSETNENTSIFQKIGAFEEELKAILPKEVENVR 230

[Close]

BLAST of CSPI04G02390 vs. NCBI nr
Match: TYK29636.1 (phenylalanine ammonia-lyase-like [Cucumis melo var. makuwa])

HSP 1 Score: 338.6 bits (867), Expect = 3.9e-89
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKT EAIDILKLMSSTFLVALCQ
Sbjct: 142 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTVEAIDILKLMSSTFLVALCQ 201

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           AIDLRHLEENLKSTVK+TVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD
Sbjct: 202 AIDLRHLEENLKSTVKNTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 261

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPLMQKLRQI+VEHALKNGDNETN NTSIFQKIGAFEEELKAILPKEVENVR
Sbjct: 262 PCSATYPLMQKLRQILVEHALKNGDNETNANTSIFQKIGAFEEELKAILPKEVENVR 318

[Close]

BLAST of CSPI04G02390 vs. TAIR 10
Match: AT3G53260.1 (phenylalanine ammonia-lyase 2 )

HSP 1 Score: 301.2 bits (770), Expect = 6.4e-82
Identity = 152/185 (82.16%), Postives = 165/185 (89.19%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKT+EA+DILKLMS+TFLV +CQ
Sbjct: 463 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSTTFLVGICQ 522

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           A+DLRHLEENL+ TVK+TVSQVAKKVLTT  NG LHPSRFCEKDLLKVVDRE  F Y+DD
Sbjct: 523 AVDLRHLEENLRQTVKNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDD 582

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVRGV- 180
           PCSATYPLMQ+LRQ+IV+HAL NG+ E N  TSIFQKIGAFEEELKA+LPKEVE  R   
Sbjct: 583 PCSATYPLMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAY 642

Query: 181 GNKIA 185
           GN  A
Sbjct: 643 GNGTA 647

[Close]

BLAST of CSPI04G02390 vs. TAIR 10
Match: AT2G37040.1 (PHE ammonia lyase 1 )

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-80
Identity = 148/177 (83.62%), Postives = 162/177 (91.53%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKT+EA+DILKLMS+TFLVA+CQ
Sbjct: 471 MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSTTFLVAICQ 530

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           A+DLRHLEENL+ TVK+TVSQVAKKVLTT  NG LHPSRFCEKDLLKVVDRE  + Y DD
Sbjct: 531 AVDLRHLEENLRQTVKNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADD 590

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCSATYPL+QKLRQ+IV+HAL NG++E N  TSIF KIGAFEEELKA+LPKEVE  R
Sbjct: 591 PCSATYPLIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAAR 647

[Close]

BLAST of CSPI04G02390 vs. TAIR 10
Match: AT3G10340.1 (phenylalanine ammonia-lyase 4 )

HSP 1 Score: 279.3 bits (713), Expect = 2.6e-75
Identity = 138/177 (77.97%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMS+T+LVALCQ
Sbjct: 453 MASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTYLVALCQ 512

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           A+DLRHLEENLK  VKS VSQVAK+VLT  +NG LHPSRF E+D+L+VVDREY F+Y DD
Sbjct: 513 AVDLRHLEENLKKAVKSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADD 572

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           PCS TYPLMQKLR I+V+HAL + + E N  TS+F KIGAFE ELK +LPKEVE VR
Sbjct: 573 PCSLTYPLMQKLRHILVDHALADPEREANSATSVFHKIGAFEAELKLLLPKEVERVR 629

[Close]

BLAST of CSPI04G02390 vs. TAIR 10
Match: AT5G04230.1 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 207.6 bits (527), Expect = 9.7e-54
Identity = 114/177 (64.41%), Postives = 134/177 (75.71%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQ+LANPVT+HV+SA QHNQDVNSLGLISSR TAEA+ ILKLMS+T+LVALCQ
Sbjct: 450 MASYCSELQFLANPVTNHVESASQHNQDVNSLGLISSRTTAEAVVILKLMSTTYLVALCQ 509

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           A DLRHLEE LK  V   VS  AK VL      A+ P R    D+L VV+REY F+Y+DD
Sbjct: 510 AFDLRHLEEILKKAVNEVVSHTAKSVL------AIEPFR-KHDDILGVVNREYVFSYVDD 569

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           P S T PLMQKLR ++ + AL   + ET+   ++F+KIGAFE ELK +LPKEVE VR
Sbjct: 570 PSSLTNPLMQKLRHVLFDKALAEPEGETD---TVFRKIGAFEAELKFLLPKEVERVR 616

[Close]

BLAST of CSPI04G02390 vs. TAIR 10
Match: AT5G04230.2 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 207.6 bits (527), Expect = 9.7e-54
Identity = 114/177 (64.41%), Postives = 134/177 (75.71%), Query Frame = 0


Query: 1   MASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQ 60
           MASYCSELQ+LANPVT+HV+SA QHNQDVNSLGLISSR TAEA+ ILKLMS+T+LVALCQ
Sbjct: 454 MASYCSELQFLANPVTNHVESASQHNQDVNSLGLISSRTTAEAVVILKLMSTTYLVALCQ 513

Query: 61  AIDLRHLEENLKSTVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDD 120
           A DLRHLEE LK  V   VS  AK VL      A+ P R    D+L VV+REY F+Y+DD
Sbjct: 514 AFDLRHLEEILKKAVNEVVSHTAKSVL------AIEPFR-KHDDILGVVNREYVFSYVDD 573

Query: 121 PCSATYPLMQKLRQIIVEHALKNGDNETNENTSIFQKIGAFEEELKAILPKEVENVR 178
           P S T PLMQKLR ++ + AL   + ET+   ++F+KIGAFE ELK +LPKEVE VR
Sbjct: 574 PSSLTNPLMQKLRHVLFDKALAEPEGETD---TVFRKIGAFEAELKFLLPKEVERVR 620

The following BLAST results are available for this feature:

BLAST of CSPI04G02390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64963	2.2e-82	80.51	Phenylalanine ammonia-lyase 1 OS=Prunus avium OX=42229 GN=PAL1 PE=2 SV=1	[more]
P45730	2.2e-82	85.31	Phenylalanine ammonia-lyase OS=Populus trichocarpa OX=3694 GN=PAL PE=2 SV=1	[more]
P45735	1.8e-81	84.75	Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera OX=29760 GN=PAL PE=2 SV...	[more]
Q9SMK9	2.4e-81	84.75	Phenylalanine ammonia-lyase 2 OS=Cicer arietinum OX=3827 GN=PAL2 PE=2 SV=1	[more]
O23865	9.1e-81	83.80	Phenylalanine ammonia-lyase 1 OS=Daucus carota OX=4039 GN=PAL1 PE=3 SV=1	[more]

BLAST of CSPI04G02390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G8HZH6	8.5e-90	98.87	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=PAL PE=2 SV=1	[more]
A0A0A0KTN3	8.5e-90	98.31	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_4G008780 PE=3 SV=1	[more]
A0A0A0KYQ0	8.5e-90	98.31	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_4G008250 PE=3 SV=1	[more]
A0A5D3E147	1.9e-89	97.74	Phenylalanine ammonia-lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BZ45	1.9e-89	97.74	Phenylalanine ammonia-lyase OS=Cucumis melo OX=3656 GN=LOC103494629 PE=3 SV=1	[more]

BLAST of CSPI04G02390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152155.3	2.7e-90	99.44	phenylalanine ammonia-lyase-like [Cucumis sativus] >KAE8649079.1 hypothetical pr...	[more]
NP_001295839.1	1.8e-89	98.87	phenylalanine ammonia-lyase-like [Cucumis sativus] >AER58180.1 phenylalanine amm...	[more]
XP_031739733.1	1.8e-89	98.31	phenylalanine ammonia-lyase [Cucumis sativus] >KAE8649078.1 hypothetical protein...	[more]
KAE8649076.1	2.3e-89	98.31	hypothetical protein Csa_014727 [Cucumis sativus]	[more]
TYK29636.1	3.9e-89	97.74	phenylalanine ammonia-lyase-like [Cucumis melo var. makuwa]	[more]

BLAST of CSPI04G02390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53260.1	6.4e-82	82.16	phenylalanine ammonia-lyase 2	[more]
AT2G37040.1	1.6e-80	83.62	PHE ammonia lyase 1	[more]
AT3G10340.1	2.6e-75	77.97	phenylalanine ammonia-lyase 4	[more]
AT5G04230.1	9.7e-54	64.41	phenyl alanine ammonia-lyase 3	[more]
AT5G04230.2	9.7e-54	64.41	phenyl alanine ammonia-lyase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 207..209
None	No IPR available	GENE3D	1.20.200.10	Fumarase/aspartase (Central domain)	coord: 1..67 e-value: 8.9E-83 score: 280.6
None	No IPR available	PANTHER	PTHR10362:SF57	PHENYLALANINE AMMONIA-LYASE 1-LIKE	coord: 1..177
IPR023144	Phenylalanine ammonia-lyase, shielding domain superfamily	GENE3D	1.10.274.20		coord: 68..178 e-value: 8.9E-83 score: 280.6
IPR001106	Aromatic amino acid lyase	PFAM	PF00221	Lyase_aromatic	coord: 1..75 e-value: 4.0E-19 score: 68.6
IPR001106	Aromatic amino acid lyase	PANTHER	PTHR10362	HISTIDINE AMMONIA-LYASE	coord: 1..177
IPR008948	L-Aspartase-like	SUPERFAMILY	48557	L-aspartase-like	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G02390.1	CSPI04G02390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009800	cinnamic acid biosynthetic process
biological_process	GO:0006559	L-phenylalanine catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0045548	phenylalanine ammonia-lyase activity
molecular_function	GO:0003824	catalytic activity