CSPI04G02220 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G02220
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	AP2/ERF domain-containing transcription factor
Location	Chr4: 1312852 .. 1313250 (-)
RNA-Seq Expression	CSPI04G02220
Synteny	CSPI04G02220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGATCGTTTGAAAAAATACAGAGGAGTTCGGAAGCGGGAGTGGGGTAAATGGACATCGGCGATTTACTACCCCAAGCAGGGGAAGCAGAAGCAACTTTGGATTGGAAGTTTTGACACGCCGGAGATGGCAGCTAGGACACACGACGTTGTCACCTACTTCTTCCGAGGTCCTAAAGCACGTTTAAACTTTCCCCAAGCGCTCCACCCTCTCCACACATTCCCATCTAATGCAAATGTCGATGATATTCGAGATCTGGCTCGCCGTGCTGCTGAAGGCACCTATGGAGGTGGAGGTGAAAGTTCTATTTTCGGCGAAACGGACGTTAATAATGTTCTTCATGCAGAATCCGGCGTCACGGAATCAGAATTGGTTGGTGAGAGGTTGTTTATGTAG

mRNA sequence

ATGGGAGATCGTTTGAAAAAATACAGAGGAGTTCGGAAGCGGGAGTGGGGTAAATGGACATCGGCGATTTACTACCCCAAGCAGGGGAAGCAGAAGCAACTTTGGATTGGAAGTTTTGACACGCCGGAGATGGCAGCTAGGACACACGACGTTGTCACCTACTTCTTCCGAGGTCCTAAAGCACGTTTAAACTTTCCCCAAGCGCTCCACCCTCTCCACACATTCCCATCTAATGCAAATGTCGATGATATTCGAGATCTGGCTCGCCGTGCTGCTGAAGGCACCTATGGAGGTGGAGGTGAAAGTTCTATTTTCGGCGAAACGGACGTTAATAATGTTCTTCATGCAGAATCCGGCGTCACGGAATCAGAATTGGTTGGTGAGAGGTTGTTTATGTAG

Coding sequence (CDS)

ATGGGAGATCGTTTGAAAAAATACAGAGGAGTTCGGAAGCGGGAGTGGGGTAAATGGACATCGGCGATTTACTACCCCAAGCAGGGGAAGCAGAAGCAACTTTGGATTGGAAGTTTTGACACGCCGGAGATGGCAGCTAGGACACACGACGTTGTCACCTACTTCTTCCGAGGTCCTAAAGCACGTTTAAACTTTCCCCAAGCGCTCCACCCTCTCCACACATTCCCATCTAATGCAAATGTCGATGATATTCGAGATCTGGCTCGCCGTGCTGCTGAAGGCACCTATGGAGGTGGAGGTGAAAGTTCTATTTTCGGCGAAACGGACGTTAATAATGTTCTTCATGCAGAATCCGGCGTCACGGAATCAGAATTGGTTGGTGAGAGGTTGTTTATGTAG

Protein sequence

MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSIFGETDVNNVLHAESGVTESELVGERLFM*

Homology

[Close]

BLAST of CSPI04G02220 vs. ExPASy Swiss-Prot
Match: Q9C9I2 (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 GN=ERF021 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.9e-16
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           YRGVRKR+WGKW S I  P  G + ++W+GSF+TPEMAA  +DV  + FRG +ARLNFP+
Sbjct: 24  YRGVRKRKWGKWVSEIREP--GTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 83

Query: 68  ALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSI 105
               L   P++++ D IR     A       G ES++
Sbjct: 84  LASSLPR-PADSSSDSIRMAVHEATLCRTTEGTESAM 117

[Close]

BLAST of CSPI04G02220 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-15
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           +RGVR R+WGKW S I  P+  K+ ++W+G+F TPEMAAR HDV     +G  A LNFP+
Sbjct: 40  FRGVRMRQWGKWVSEIREPR--KKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 99

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA 93
             + L   P++A+  DI++ A  AA
Sbjct: 100 LAYHLPR-PASADPKDIQEAAAAAA 121

[Close]

BLAST of CSPI04G02220 vs. ExPASy Swiss-Prot
Match: Q1ECI2 (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 GN=ERF023 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.2e-15
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           Y GVRKR WGKW S I  P+  K+ ++W+GSF  PEMAA+ +DV  +  +G KA+LNFP+
Sbjct: 45  YHGVRKRRWGKWVSEIREPR--KKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPE 104

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA 93
            +  L   PS     DI+  A +AA
Sbjct: 105 EIEDLPR-PSTCTPRDIQVAAAKAA 126

[Close]

BLAST of CSPI04G02220 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 5   LKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLN 64
           LK Y+G+R R+WGKW + I  P   K+ ++W+GS+ TPE AAR +D   ++ RGP ARLN
Sbjct: 25  LKPYKGIRMRKWGKWVAEIREP--NKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLN 84

Query: 65  FPQALHPLHTFPSNANVDDIRD--LARRAAEGTYGGGGESSIFGETDVNN 113
           FP+ L  L          D+    + R+AAE     G +    G T V N
Sbjct: 85  FPELLAGLTVSNGGGRGGDLSAAYIRRKAAE----VGAQVDALGATVVVN 128

[Close]

BLAST of CSPI04G02220 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           YRGVRKR WGKW S I  P+  K+ ++W+G+F +PEMAAR HDV     +G  A LNFP 
Sbjct: 36  YRGVRKRNWGKWVSEIREPR--KKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPD 95

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA--EGTYGGGGESSI-FGETDVNNVLHA--ESGVTE 127
            L      PS+ +  DI+  A +AA  E +      SS+ F  +  ++ L +   S  T 
Sbjct: 96  -LAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLESLVSSSATG 155

Query: 128 SELVGE 129
           SE +GE
Sbjct: 156 SEELGE 158

[Close]

BLAST of CSPI04G02220 vs. ExPASy TrEMBL
Match: A0A0A0KTL4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G007650 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.6e-36
Identity = 79/109 (72.48%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPK 60
           MGD LK+YRGVRKR WGK TSAIYYPKQGKQKQLWIGSFDTPEMAA  +D V  FF GPK
Sbjct: 16  MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 75

Query: 61  ARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSIFGETD 110
           ARLNFP+  H L  FP +A V  IR LAR AAEG++GGGG SSI G T+
Sbjct: 76  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTE 124

[Close]

BLAST of CSPI04G02220 vs. ExPASy TrEMBL
Match: B9T777 (DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0168650 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.2e-19
Identity = 61/144 (42.36%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           YRGVRKR+WGKW S I  P  GK+ ++W+GSF+TPEMAA  +DV   +FRG +A+LNFP 
Sbjct: 43  YRGVRKRKWGKWVSEIREP--GKKTRIWLGSFETPEMAATAYDVAALYFRGREAKLNFPH 102

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA-----------EGTYGGGG--------ESSIFGET 127
            +H L   P++ N DDIR  A  AA           EG+ GGGG         SS+ G  
Sbjct: 103 LVHDLPN-PASPNADDIRMAAHEAALRLRSLPIPEREGSNGGGGGGSGGSGSSSSVVGPI 162

Query: 128 DVNNVLHAESGVTESELVGERLFM 133
            V         + ES L   +++M
Sbjct: 163 TVRLSPREIQAINESPLDSPKMWM 183

[Close]

BLAST of CSPI04G02220 vs. ExPASy TrEMBL
Match: A0A6A1VDU2 (AP2/ERF domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR6G019665 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 4.2e-18
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 1   MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPK 60
           +G     YRGVRKR+WGKW S I  P  GK+ ++W+GSF TPEMAA  +DV  ++FRG +
Sbjct: 8   VGASSSSYRGVRKRKWGKWVSEIREP--GKKTRIWLGSFQTPEMAAAAYDVAAFYFRGRE 67

Query: 61  ARLNFPQALHPLHTFPSNANVDDIRDLARRA------AEGTYGGGGESS 104
           ARLNFP+ ++ L   P++++ DDIR  A  A      AEGT   GG SS
Sbjct: 68  ARLNFPELVNNLPR-PASSDPDDIRMAAHEAALMVKDAEGTNEAGGSSS 113

[Close]

BLAST of CSPI04G02220 vs. ExPASy TrEMBL
Match: A0A2N9GI64 (AP2/ERF domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27135 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 9.4e-18
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0


Query: 2   GDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKA 61
           G     YRGVRKR+WGKW S I  P  GK+ ++W+GSF+TPEMAA  +DV    FRG +A
Sbjct: 12  GAASSSYRGVRKRKWGKWVSEIREP--GKKTRIWLGSFETPEMAAAAYDVAALHFRGREA 71

Query: 62  RLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSIFGET 109
           RLNFP+ +H L   P ++N +DIR  A  AA    G  G + I G +
Sbjct: 72  RLNFPELVHSLPR-PVSSNAEDIRMAAHEAALRLRGSAGVAEIGGSS 115

[Close]

BLAST of CSPI04G02220 vs. ExPASy TrEMBL
Match: A0A2C9U2R9 (AP2/ERF domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_18G118900 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.1e-17
Identity = 54/110 (49.09%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 2   GDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKA 61
           G     YRGVRKR+WGKW S I  P  GK+ ++W+GSFDTPEMAA  +DV    FRG +A
Sbjct: 17  GGTSSSYRGVRKRKWGKWVSEIREP--GKKTRIWLGSFDTPEMAATAYDVAALHFRGREA 76

Query: 62  RLNFPQALHPLHTFPSNANVDDIRDLARRAA--------EGTYGGGGESS 104
           +LNFP+ ++ L   P ++N +DIR  A  AA        E   GGGG SS
Sbjct: 77  KLNFPELVNDLPK-PESSNAEDIRMAAHEAALRIRTPMKEPESGGGGGSS 123

[Close]

BLAST of CSPI04G02220 vs. NCBI nr
Match: KAE8649074.1 (hypothetical protein Csa_023806, partial [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 79/109 (72.48%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPK 60
           MGD LK+YRGVRKR WGK TSAIYYPKQGKQKQLWIGSFDTPEMAA  +D V  FF GPK
Sbjct: 3   MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 62

Query: 61  ARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSIFGETD 110
           ARLNFP+  H L  FP +A V  IR LAR AAEG++GGGG SSI G T+
Sbjct: 63  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTE 111

[Close]

BLAST of CSPI04G02220 vs. NCBI nr
Match: XP_004152323.1 (ethylene-responsive transcription factor ERF021 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 79/109 (72.48%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPK 60
           MGD LK+YRGVRKR WGK TSAIYYPKQGKQKQLWIGSFDTPEMAA  +D V  FF GPK
Sbjct: 1   MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 60

Query: 61  ARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSIFGETD 110
           ARLNFP+  H L  FP +A V  IR LAR AAEG++GGGG SSI G T+
Sbjct: 61  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTE 109

[Close]

BLAST of CSPI04G02220 vs. NCBI nr
Match: XP_002534096.2 (ethylene-responsive transcription factor ERF021 [Ricinus communis])

HSP 1 Score: 105.1 bits (261), Expect = 4.6e-19
Identity = 61/144 (42.36%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           YRGVRKR+WGKW S I  P  GK+ ++W+GSF+TPEMAA  +DV   +FRG +A+LNFP 
Sbjct: 17  YRGVRKRKWGKWVSEIREP--GKKTRIWLGSFETPEMAATAYDVAALYFRGREAKLNFPH 76

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA-----------EGTYGGGG--------ESSIFGET 127
            +H L   P++ N DDIR  A  AA           EG+ GGGG         SS+ G  
Sbjct: 77  LVHDLPN-PASPNADDIRMAAHEAALRLRSLPIPEREGSNGGGGGGSGGSGSSSSVVGPI 136

Query: 128 DVNNVLHAESGVTESELVGERLFM 133
            V         + ES L   +++M
Sbjct: 137 TVRLSPREIQAINESPLDSPKMWM 157

[Close]

BLAST of CSPI04G02220 vs. NCBI nr
Match: EEF28287.1 (DNA binding protein, putative [Ricinus communis])

HSP 1 Score: 105.1 bits (261), Expect = 4.6e-19
Identity = 61/144 (42.36%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           YRGVRKR+WGKW S I  P  GK+ ++W+GSF+TPEMAA  +DV   +FRG +A+LNFP 
Sbjct: 43  YRGVRKRKWGKWVSEIREP--GKKTRIWLGSFETPEMAATAYDVAALYFRGREAKLNFPH 102

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA-----------EGTYGGGG--------ESSIFGET 127
            +H L   P++ N DDIR  A  AA           EG+ GGGG         SS+ G  
Sbjct: 103 LVHDLPN-PASPNADDIRMAAHEAALRLRSLPIPEREGSNGGGGGGSGGSGSSSSVVGPI 162

Query: 128 DVNNVLHAESGVTESELVGERLFM 133
            V         + ES L   +++M
Sbjct: 163 TVRLSPREIQAINESPLDSPKMWM 183

[Close]

BLAST of CSPI04G02220 vs. NCBI nr
Match: KAB1210944.1 (hypothetical protein CJ030_MR6G019665 [Morella rubra])

HSP 1 Score: 100.9 bits (250), Expect = 8.7e-18
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 1   MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPK 60
           +G     YRGVRKR+WGKW S I  P  GK+ ++W+GSF TPEMAA  +DV  ++FRG +
Sbjct: 8   VGASSSSYRGVRKRKWGKWVSEIREP--GKKTRIWLGSFQTPEMAAAAYDVAAFYFRGRE 67

Query: 61  ARLNFPQALHPLHTFPSNANVDDIRDLARRA------AEGTYGGGGESS 104
           ARLNFP+ ++ L   P++++ DDIR  A  A      AEGT   GG SS
Sbjct: 68  ARLNFPELVNNLPR-PASSDPDDIRMAAHEAALMVKDAEGTNEAGGSSS 113

[Close]

BLAST of CSPI04G02220 vs. TAIR 10
Match: AT1G71450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           YRGVRKR+WGKW S I  P  G + ++W+GSF+TPEMAA  +DV  + FRG +ARLNFP+
Sbjct: 24  YRGVRKRKWGKWVSEIREP--GTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 83

Query: 68  ALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSI 105
               L   P++++ D IR     A       G ES++
Sbjct: 84  LASSLPR-PADSSSDSIRMAVHEATLCRTTEGTESAM 117

[Close]

BLAST of CSPI04G02220 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           +RGVR R+WGKW S I  P+  K+ ++W+G+F TPEMAAR HDV     +G  A LNFP+
Sbjct: 40  FRGVRMRQWGKWVSEIREPR--KKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 99

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA 93
             + L   P++A+  DI++ A  AA
Sbjct: 100 LAYHLPR-PASADPKDIQEAAAAAA 121

[Close]

BLAST of CSPI04G02220 vs. TAIR 10
Match: AT1G01250.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.1e-16
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           Y GVRKR WGKW S I  P+  K+ ++W+GSF  PEMAA+ +DV  +  +G KA+LNFP+
Sbjct: 45  YHGVRKRRWGKWVSEIREPR--KKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPE 104

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA 93
            +  L   PS     DI+  A +AA
Sbjct: 105 EIEDLPR-PSTCTPRDIQVAAAKAA 126

[Close]

BLAST of CSPI04G02220 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 80.9 bits (198), Expect = 8.7e-16
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 5   LKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLN 64
           LK Y+G+R R+WGKW + I  P   K+ ++W+GS+ TPE AAR +D   ++ RGP ARLN
Sbjct: 25  LKPYKGIRMRKWGKWVAEIREP--NKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLN 84

Query: 65  FPQALHPLHTFPSNANVDDIRD--LARRAAEGTYGGGGESSIFGETDVNN 113
           FP+ L  L          D+    + R+AAE     G +    G T V N
Sbjct: 85  FPELLAGLTVSNGGGRGGDLSAAYIRRKAAE----VGAQVDALGATVVVN 128

[Close]

BLAST of CSPI04G02220 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-15
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 8   YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQ 67
           YRGVRKR WGKW S I  P+  K+ ++W+G+F +PEMAAR HDV     +G  A LNFP 
Sbjct: 36  YRGVRKRNWGKWVSEIREPR--KKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPD 95

Query: 68  ALHPLHTFPSNANVDDIRDLARRAA--EGTYGGGGESSI-FGETDVNNVLHA--ESGVTE 127
            L      PS+ +  DI+  A +AA  E +      SS+ F  +  ++ L +   S  T 
Sbjct: 96  -LAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLESLVSSSATG 155

Query: 128 SELVGE 129
           SE +GE
Sbjct: 156 SEELGE 158

The following BLAST results are available for this feature:

BLAST of CSPI04G02220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9I2	2.9e-16	46.39	Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SUK8	3.2e-15	47.06	Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q1ECI2	7.2e-15	47.06	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	1.2e-14	40.00	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q39127	2.7e-14	41.27	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CSPI04G02220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTL4	7.6e-36	72.48	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G007650 PE=...	[more]
B9T777	2.2e-19	42.36	DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0168650 PE=4 S...	[more]
A0A6A1VDU2	4.2e-18	49.54	AP2/ERF domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR6G019665...	[more]
A0A2N9GI64	9.4e-18	48.60	AP2/ERF domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27135 ...	[more]
A0A2C9U2R9	2.1e-17	49.09	AP2/ERF domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_18G11890...	[more]

BLAST of CSPI04G02220 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649074.1	1.6e-35	72.48	hypothetical protein Csa_023806, partial [Cucumis sativus]	[more]
XP_004152323.1	1.6e-35	72.48	ethylene-responsive transcription factor ERF021 [Cucumis sativus]	[more]
XP_002534096.2	4.6e-19	42.36	ethylene-responsive transcription factor ERF021 [Ricinus communis]	[more]
EEF28287.1	4.6e-19	42.36	DNA binding protein, putative [Ricinus communis]	[more]
KAB1210944.1	8.7e-18	49.54	hypothetical protein CJ030_MR6G019665 [Morella rubra]	[more]

BLAST of CSPI04G02220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71450.1	2.1e-17	46.39	Integrase-type DNA-binding superfamily protein	[more]
AT4G16750.1	2.3e-16	47.06	Integrase-type DNA-binding superfamily protein	[more]
AT1G01250.1	5.1e-16	47.06	Integrase-type DNA-binding superfamily protein	[more]
AT2G23340.1	8.7e-16	40.00	DREB and EAR motif protein 3	[more]
AT5G25810.1	1.9e-15	41.27	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 8..19 score: 70.61 coord: 32..48 score: 47.17
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..72 e-value: 2.2E-22 score: 90.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..58 e-value: 8.6E-10 score: 38.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..66 score: 20.744886
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..68 e-value: 1.90873E-23 score: 84.2455
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..68 e-value: 2.2E-21 score: 77.8
None	No IPR available	PANTHER	PTHR31985:SF171	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF017	coord: 6..102
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 6..102
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G02220.1	CSPI04G02220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity