CSPI04G02000 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGGTGGCCGTTAAAAGAGAGAGATAATAGAGCAAAATGGCAGCGACGGCGACGGCGACTGGAGTATTGAAGATCGGCGTTCCGGCACCAGCTCCAGCTCCGCCTCCGTTGAAGGCAAAATCAGGAAGGCATCCAACGAATTTTGCAAGCCTCACAATGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCGTTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCGACGACGACAACGACGCCGGCGGTTTCATCAATCAGGTGTTTGTTTTCCCTAATTGCCTTCTATCTCTAAGTATATGAGAGCATTAAACATATGCTTAGCAGATTGCTGATTCAACATAGTAATTCGATGCCTAATTAGCTGAATTTAGGCTGAATGAAAGAAAAATAGATGGAACTATTCAGTTTACCACATTTTAGCAGTATTTTGACTGATTTCTGGCTAGATTCTATAAGTTTCATTGATTGAATTGGACTAGGAAATCTGGAATTTTAGTAAATTCTTGTCAGGTTAGCTATTCTGTCTTTCGATTATCAAACCTGGAAAAAGAACACTTGAACGCACAAAAAACTAAAGAACACTAAAATATGTTGTATTGTGATAAGAAAAGTAACAACATAAACATAACCTAGTCTTTGCTAATCTCTTATAAATTCTCCAAAGAAAATCCGCAAAATTTCACTCTCTCCTCGTAACCTTACACCCTCTATTTATAGATAAATGCCTAACAAATCAAATTTACTAACTATTTACTAAGATGTCTCTTTTATCAACCATACTGATATTCTACTAATGATCCTACCATTTTCATAACTAGAGATCTTTGGGAGCTCCTTCTTGCATTGATTCAAATTCTTCTTTGATGATGAGTGCATGTTGAGCAACCAGTGTGTAGACCATTTATTATTGATGTTGTGCCAAAATTGCTTTCAGGGCAATGGTTTCTTCTACGGCACAATAAATCTTTTTGAAATTCGATTAACAAGGTTTCTATTTCTCTTACCCAATAAATCTCTTTTAAGATATGCTTAATATTGACGGGAAAGCCTAAACTTAAACATAATCAATATAGAATTGTATAGAAAAATGAAAAGAAAGGAGAGTTTCAAAACATTATATTCTATGCAATAAAATTAGTGAAGATGGCCTGGAATTAGAAAACTCAAACATAGACTTACCGTTTTAATTCCAAGATATACAAGTCCAACATGTTCGTCAGCCTCTGCTTGGGAATTTGCTCTTTGTACTCTCTAAGGTAGCAACTGTTTAGTTAAATTACATTTCTTGTTTTCAGACATGGCATATTTAGACTGTGTAATGGCATCTCTGATAGTTTGATTTAGTTGTTGGTAATAATTTATTTTGTTTATGAGGTAGTGAAACCATATAATAATTTTATCTCACTCCATAGGTAAGACGTTGAGTTATTTTCTATATGTCATTAACATGAGTAAAGACAAGCTTTGGAAGTAGTTTACATTATCTCTCATGCCCTTCTCAAGATTTATTTGGAACGAATTTTCTAAAATATGTTTTTAAGCGTGTTTTAAGCACTTCAAAAGTCATTTCAAGCCGGTTCAAAATATGTTGAAGAAAATGATATGATATACCCAATATTTACTCGGTTGTATCACTTGATTATGTGATAACACAGGAGGATGTGGAATTTTTGTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGACACAAAGCTAACGATCCACTGTCGTTTTTACAAGATGATGAAAGGATTTTAACCATCCAAAAATTTGTAAAAGAAAAAAAAGTTAGAACTTGTAAAAGCACTAGAAATTGAAAACAGATGAAACACTTCATATTTTTGTGTTGCTCGATAATCTTCATTGTATAAGTTGACATTAAGAATAGAAATCATGCCTTACACTATTCATATTGCTCGGAC GCGGTGGCCGTTAAAAGAGAGAGATAATAGAGCAAAATGGCAGCGACGGCGACGGCGACTGGAGTATTGAAGATCGGCGTTCCGGCACCAGCTCCAGCTCCGCCTCCGTTGAAGGCAAAATCAGGAAGGCATCCAACGAATTTTGCAAGCCTCACAATGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCGTTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCGACGACGACAACGACGCCGGCGGTTTCATCAATCAGGAGGATGTGGAATTTTTGTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGACACAAAGCTAACGATCCACTGTCGTTTTTACAAGATGATGAAAGGATTTTAACCATCCAAAAATTTGTAAAAGAAAAAAAAGTTAGAACTTGTAAAAGCACTAGAAATTGAAAACAGATGAAACACTTCATATTTTTGTGTTGCTCGATAATCTTCATTGTATAAGTTGACATTAAGAATAGAAATCATGCCTTACACTATTCATATTGCTCGGAC ATGGCAGCGACGGCGACGGCGACTGGAGTATTGAAGATCGGCGTTCCGGCACCAGCTCCAGCTCCGCCTCCGTTGAAGGCAAAATCAGGAAGGCATCCAACGAATTTTGCAAGCCTCACAATGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCGTTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCGACGACGACAACGACGCCGGCGGTTTCATCAATCAGGAGGATGTGGAATTTTTGTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGACACAAAGCTAA MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS* Homology
BLAST of CSPI04G02000 vs. ExPASy TrEMBL
Match: A0A0A0KWZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006440 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 4.6e-71 Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of CSPI04G02000 vs. ExPASy TrEMBL
Match: A0A1S4E0N1 (uncharacterized protein LOC103494660 OS=Cucumis melo OX=3656 GN=LOC103494660 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 127/143 (88.81%), Postives = 131/143 (91.61%), Query Frame = 0
BLAST of CSPI04G02000 vs. ExPASy TrEMBL
Match: A0A6J1DKQ3 (uncharacterized protein LOC111020963 OS=Momordica charantia OX=3673 GN=LOC111020963 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 1.0e-41 Identity = 103/149 (69.13%), Postives = 112/149 (75.17%), Query Frame = 0
BLAST of CSPI04G02000 vs. ExPASy TrEMBL
Match: A0A6J1GTV4 (uncharacterized protein LOC111457518 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457518 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 6.5e-41 Identity = 99/143 (69.23%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of CSPI04G02000 vs. ExPASy TrEMBL
Match: A0A6J1GU58 (uncharacterized protein LOC111457518 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457518 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 8.0e-39 Identity = 96/143 (67.13%), Postives = 108/143 (75.52%), Query Frame = 0
BLAST of CSPI04G02000 vs. NCBI nr
Match: XP_004152177.2 (uncharacterized protein LOC101209077 isoform X1 [Cucumis sativus] >KGN52937.1 hypothetical protein Csa_014893 [Cucumis sativus]) HSP 1 Score: 276.9 bits (707), Expect = 9.6e-71 Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of CSPI04G02000 vs. NCBI nr
Match: XP_008454177.1 (PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo] >XP_016901530.1 PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]) HSP 1 Score: 245.4 bits (625), Expect = 3.1e-61 Identity = 127/143 (88.81%), Postives = 131/143 (91.61%), Query Frame = 0
BLAST of CSPI04G02000 vs. NCBI nr
Match: XP_038902938.1 (uncharacterized protein LOC120089511 [Benincasa hispida]) HSP 1 Score: 218.0 bits (554), Expect = 5.3e-53 Identity = 113/143 (79.02%), Postives = 121/143 (84.62%), Query Frame = 0
BLAST of CSPI04G02000 vs. NCBI nr
Match: XP_022153461.1 (uncharacterized protein LOC111020963 [Momordica charantia]) HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41 Identity = 103/149 (69.13%), Postives = 112/149 (75.17%), Query Frame = 0
BLAST of CSPI04G02000 vs. NCBI nr
Match: XP_022955512.1 (uncharacterized protein LOC111457518 isoform X1 [Cucurbita moschata] >KAG7018380.1 hypothetical protein SDJN02_20248 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40 Identity = 99/143 (69.23%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of CSPI04G02000 vs. TAIR 10
Match: AT3G15900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11 Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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