CSPI04G01920 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G01920
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Calcineurin subunit B
Location	Chr4: 1108869 .. 1109504 (-)
RNA-Seq Expression	CSPI04G01920
Synteny	CSPI04G01920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGTTTTATTTTTCCAATACTATCGACCCTAAAATTTATTATCATCCTCTTTACATCCTGTTATTCTCCATATGGCACCGATTCCTAAGTATAAATTCCTCTCCCTTTCCCTCTCTCTCTCCGAAGCCCAAAAGATTCAAATTTTTTACAGTACAAGTGAGAAAACTCTTCTTGTGTTTCAAAAAACTCACACAACAACCGAGAGAACTTGCAAACTGGCCTCAGAAGTTGATGAAACTGACTTTTTTCTAACGCAGCTACAATGGCAGAACACCAAAAACGCTCTCATGGACATGGAACTGAAGCAGATGGTTCGAGTCATGAGATGGTTTTGAGAACATTTGATCGAAATGGGGTTGCGAAAAACTCATCGAAAGATGGTTCCACGTCGAGTGTGAAAGCTTGTGAAGTTGAAAAGATCGGTAGAAGATTGAGCATTCTTGAAGAAGATACAAGAGCTATGAAGAAAGCTTTGTTCGACAGTTTGGAGGAAAGGAGAAATCTTGTGTATGAGATAAACCAGCAATTTCAGATCATAAACAAAAGCCATGCGTTATATAACGAGGTAGCTGCTGCTTTGATGGCTTCTCTTGAAGATCATGATGAGACACTCCATTCCCCTAAGGTAAAATGA

mRNA sequence

AAGAGTTTTATTTTTCCAATACTATCGACCCTAAAATTTATTATCATCCTCTTTACATCCTGTTATTCTCCATATGGCACCGATTCCTAAGTATAAATTCCTCTCCCTTTCCCTCTCTCTCTCCGAAGCCCAAAAGATTCAAATTTTTTACAGTACAAGTGAGAAAACTCTTCTTGTGTTTCAAAAAACTCACACAACAACCGAGAGAACTTGCAAACTGGCCTCAGAAGTTGATGAAACTGACTTTTTTCTAACGCAGCTACAATGGCAGAACACCAAAAACGCTCTCATGGACATGGAACTGAAGCAGATGGTTCGAGTCATGAGATGGTTTTGAGAACATTTGATCGAAATGGGGTTGCGAAAAACTCATCGAAAGATGGTTCCACGTCGAGTGTGAAAGCTTGTGAAGTTGAAAAGATCGGTAGAAGATTGAGCATTCTTGAAGAAGATACAAGAGCTATGAAGAAAGCTTTGTTCGACAGTTTGGAGGAAAGGAGAAATCTTGTGTATGAGATAAACCAGCAATTTCAGATCATAAACAAAAGCCATGCGTTATATAACGAGGTAGCTGCTGCTTTGATGGCTTCTCTTGAAGATCATGATGAGACACTCCATTCCCCTAAGGTAAAATGA

Coding sequence (CDS)

ATGGCAGAACACCAAAAACGCTCTCATGGACATGGAACTGAAGCAGATGGTTCGAGTCATGAGATGGTTTTGAGAACATTTGATCGAAATGGGGTTGCGAAAAACTCATCGAAAGATGGTTCCACGTCGAGTGTGAAAGCTTGTGAAGTTGAAAAGATCGGTAGAAGATTGAGCATTCTTGAAGAAGATACAAGAGCTATGAAGAAAGCTTTGTTCGACAGTTTGGAGGAAAGGAGAAATCTTGTGTATGAGATAAACCAGCAATTTCAGATCATAAACAAAAGCCATGCGTTATATAACGAGGTAGCTGCTGCTTTGATGGCTTCTCTTGAAGATCATGATGAGACACTCCATTCCCCTAAGGTAAAATGA

Protein sequence

MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSILEEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSPKVK*

Homology

[Close]

BLAST of CSPI04G01920 vs. ExPASy TrEMBL
Match: A0A0A0KVL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006360 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.2e-60
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60
           MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL
Sbjct: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60

Query: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120
           EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP
Sbjct: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120

Query: 121 KVK 124
           KVK
Sbjct: 121 KVK 123

[Close]

BLAST of CSPI04G01920 vs. ExPASy TrEMBL
Match: A0A5A7TMN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002060 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 112/123 (91.06%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60
           MAEHQKRSHGH TEADGSSHEMVLRTFDRNGVAK SSK GS S VKACEVE+IGRRL+IL
Sbjct: 1   MAEHQKRSHGHATEADGSSHEMVLRTFDRNGVAKYSSKSGSRSRVKACEVEQIGRRLTIL 60

Query: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120
           EEDTRAMKKALFDSLEER+NLVYEINQQFQIINKSH L NEV AALMASLEDHDETLHSP
Sbjct: 61  EEDTRAMKKALFDSLEERKNLVYEINQQFQIINKSHELCNEV-AALMASLEDHDETLHSP 120

Query: 121 KVK 124
           KVK
Sbjct: 121 KVK 122

[Close]

BLAST of CSPI04G01920 vs. ExPASy TrEMBL
Match: A0A5D3E0H5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002060 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.3e-50
Identity = 111/123 (90.24%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60
           MAEHQKRSH H TEADGSSHEMVLRTFDRNGVAK SSK GS S VKACEVE+IGRRL+IL
Sbjct: 1   MAEHQKRSHWHATEADGSSHEMVLRTFDRNGVAKYSSKSGSRSRVKACEVEQIGRRLTIL 60

Query: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120
           EEDTRAMKKALFDSLEER+NLVYEINQQFQIINKSH L NEV AALMASLEDHDETLHSP
Sbjct: 61  EEDTRAMKKALFDSLEERKNLVYEINQQFQIINKSHELCNEV-AALMASLEDHDETLHSP 120

Query: 121 KVK 124
           KVK
Sbjct: 121 KVK 122

[Close]

BLAST of CSPI04G01920 vs. ExPASy TrEMBL
Match: A0A6J1DKS8 (uncharacterized protein LOC111020982 OS=Momordica charantia OX=3673 GN=LOC111020982 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 95/122 (77.87%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60
           MAEHQ+  H H  EADGS HEMVLR FD+NGVAK  SKD   S VKACEVEKI RRL+IL
Sbjct: 1   MAEHQEFPHSHRMEADGSRHEMVLRAFDQNGVAKKPSKDTPGSRVKACEVEKISRRLNIL 60

Query: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120
           EEDTR MKKALFDSLEE RNLVYEINQQFQ INKSH L NEVA+  MA LEDHDETL+SP
Sbjct: 61  EEDTRDMKKALFDSLEESRNLVYEINQQFQSINKSHQLCNEVASGFMAPLEDHDETLNSP 120

Query: 121 KV 123
           KV
Sbjct: 121 KV 122

[Close]

BLAST of CSPI04G01920 vs. ExPASy TrEMBL
Match: A0A1S4DZN5 (uncharacterized protein LOC103494669 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494669 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 22  MVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSILEEDTRAMKKALFDSLEERRNL 81
           MVLRTFDRNGVAK SSK GS S VKACEVE+IGRRL+ILEEDTRAMKKALFDSLEER+NL
Sbjct: 1   MVLRTFDRNGVAKYSSKSGSRSRVKACEVEQIGRRLTILEEDTRAMKKALFDSLEERKNL 60

Query: 82  VYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSPK 122
           VYEINQQFQIINKSH L NEV AALMASLEDHDETLHSPK
Sbjct: 61  VYEINQQFQIINKSHELCNEV-AALMASLEDHDETLHSPK 99

[Close]

BLAST of CSPI04G01920 vs. NCBI nr
Match: KAE8649065.1 (hypothetical protein Csa_014725 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60
           MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL
Sbjct: 208 MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 267

Query: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120
           EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP
Sbjct: 268 EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 327

Query: 121 K 122
           K
Sbjct: 328 K 328

[Close]

BLAST of CSPI04G01920 vs. NCBI nr
Match: XP_011652992.1 (uncharacterized protein LOC105435163 isoform X1 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60
           MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL
Sbjct: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60

Query: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120
           EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP
Sbjct: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120

Query: 121 K 122
           K
Sbjct: 121 K 121

[Close]

BLAST of CSPI04G01920 vs. NCBI nr
Match: KAA0044470.1 (hypothetical protein E6C27_scaffold46G002060 [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 3.3e-51
Identity = 112/123 (91.06%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60
           MAEHQKRSHGH TEADGSSHEMVLRTFDRNGVAK SSK GS S VKACEVE+IGRRL+IL
Sbjct: 1   MAEHQKRSHGHATEADGSSHEMVLRTFDRNGVAKYSSKSGSRSRVKACEVEQIGRRLTIL 60

Query: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120
           EEDTRAMKKALFDSLEER+NLVYEINQQFQIINKSH L NEV AALMASLEDHDETLHSP
Sbjct: 61  EEDTRAMKKALFDSLEERKNLVYEINQQFQIINKSHELCNEV-AALMASLEDHDETLHSP 120

Query: 121 KVK 124
           KVK
Sbjct: 121 KVK 122

[Close]

BLAST of CSPI04G01920 vs. NCBI nr
Match: TYK29597.1 (hypothetical protein E5676_scaffold655G002060 [Cucumis melo var. makuwa])

HSP 1 Score: 208.8 bits (530), Expect = 2.8e-50
Identity = 111/123 (90.24%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 1   MAEHQKRSHGHGTEADGSSHEMVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSIL 60
           MAEHQKRSH H TEADGSSHEMVLRTFDRNGVAK SSK GS S VKACEVE+IGRRL+IL
Sbjct: 1   MAEHQKRSHWHATEADGSSHEMVLRTFDRNGVAKYSSKSGSRSRVKACEVEQIGRRLTIL 60

Query: 61  EEDTRAMKKALFDSLEERRNLVYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSP 120
           EEDTRAMKKALFDSLEER+NLVYEINQQFQIINKSH L NEV AALMASLEDHDETLHSP
Sbjct: 61  EEDTRAMKKALFDSLEERKNLVYEINQQFQIINKSHELCNEV-AALMASLEDHDETLHSP 120

Query: 121 KVK 124
           KVK
Sbjct: 121 KVK 122

[Close]

BLAST of CSPI04G01920 vs. NCBI nr
Match: XP_011652993.1 (uncharacterized protein LOC105435163 isoform X2 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 7.0e-46
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 22  MVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSILEEDTRAMKKALFDSLEERRNL 81
           MVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSILEEDTRAMKKALFDSLEERRNL
Sbjct: 1   MVLRTFDRNGVAKNSSKDGSTSSVKACEVEKIGRRLSILEEDTRAMKKALFDSLEERRNL 60

Query: 82  VYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSPK 122
           VYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSPK
Sbjct: 61  VYEINQQFQIINKSHALYNEVAAALMASLEDHDETLHSPK 100

The following BLAST results are available for this feature:

BLAST of CSPI04G01920 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G01920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVL6	9.2e-60	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006360 PE=4 SV=1	[more]
A0A5A7TMN9	1.6e-51	91.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E0H5	1.3e-50	90.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DKS8	1.1e-41	77.87	uncharacterized protein LOC111020982 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A1S4DZN5	1.2e-38	90.00	uncharacterized protein LOC103494669 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CSPI04G01920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649065.1	2.1e-58	100.00	hypothetical protein Csa_014725 [Cucumis sativus]	[more]
XP_011652992.1	2.1e-58	100.00	uncharacterized protein LOC105435163 isoform X1 [Cucumis sativus]	[more]
KAA0044470.1	3.3e-51	91.06	hypothetical protein E6C27_scaffold46G002060 [Cucumis melo var. makuwa]	[more]
TYK29597.1	2.8e-50	90.24	hypothetical protein E5676_scaffold655G002060 [Cucumis melo var. makuwa]	[more]
XP_011652993.1	7.0e-46	100.00	uncharacterized protein LOC105435163 isoform X2 [Cucumis sativus]	[more]

BLAST of CSPI04G01920 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G01920.1	CSPI04G01920.1	mRNA