CSPI04G01480 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G01480
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 829480 .. 831635 (+)
RNA-Seq ExpressionCSPI04G01480
SyntenyCSPI04G01480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAACAAATATTTATTCATTGTATTTTAAAAGGAGTTTGTTGTACAGTCCTGGAACCCCCCACTCCTGGTGTTACACCAGAACGAGTAAAAACTTTGGTCTATTGGGTAAGAAGTGTTAAAAGAAACGGCTAGTATATTAGCACAAAACTATGGCAAGTCAAGAAAACATAAAGTTGCTCTGGCCTTATGAGAAACCGAATCATAAATAAATTACAAAAAGCCCGTACTTGGATGATTGGTGCAATTTAATCTTTCTTCAGTCACTTTCATGCTCTGTCTCTTCATTTTTTAACATCGACTGAGCCTCGCGACGTTTTCCACCACTCATCAGGTTGGCAAGCTCTTGTATGGAGCAAGAAGTGCTTCGTTTCATCTTGTCACCAAGTATCGCAACCTGATCCTTGAACCCTATCCCCAGAAGTCGGTCCCTCAACAACTCAACAGTAGCGATATATGGAGGTATTCCCTCATCAATCATCATTTCAAAGTACTTACATGCTTCTTCTAACTTCCATTTTTTCTTGCAGAAACCATGAATCATGACAGCATAAGTTGAAACAGAAGGGTAAAATCCTCTCTTTCCCATACTCTCCCACACTTCATTGGCTCTGTCAAATCTTCCCACCCTTACTAGCAATTTCAGAACCATATTGTAAGTATGTTTATCTGGAACACATTTGTCCCTATCCATTCTCTTTACCAAGTTAAGAGCACTATTGACCTCGCTATGATCACAATGATAAGCTTGGATTGCATTGTAGGACCATGTATCTGGAGTAACTCCTCTTTCAATCATTTCGTCCAAAATTTGGTAAGCTTCTTCCACGTTTTGATCTTTACAAAGCTTCTTGATAACACAATTATAAGTAAACACATTAGGAAGAAGGTTTTTCCTCTTCGTTCTTTCTAAGACCCTATAAACCGTATGCAAATCATTTTCTTGACAACTTGAGCGGATGAAAATTGAATACGTATCAGCATCTGGGTCAACTCCATTTGAATCCATCTCCAGAAACATCTTGTACGCTTCATCCCTTTTCCCACCTTTGCACAGAGCTTCCAAGAGACTATTGTAAGCAAGCACATCAATCAAACAACCTCGTTCCCGCATTTCATCAAACACCTTCTGGGCATTGTTTGAATCACCCACAACGCCCCAACCCCTAGTCAAAATGCTGTAAGTTTTCACACTCGGATTAAACACACTCTTAACTTTATCAAAAAACTGTTGAGCATGAGCCACATGTTTCCTCTTGCATAGAGTATACAAGAGCTTATCAAGATCATCAACACCAGCCCTAATCCCAAACTCCCCCATTCGATTGAAAGCTCGAATGGCATCTTGAGGCAAATCAGCCCTGCTATAAGCTGTGAAAACATGCCAGAAAAGTTCATGGGTAATCACAGAGGACCGAGTCTCCCTTATTTCTATAAGAAAATCCCACAAAATAGCGAATTGTCCACTGCTTCCCAAGATGTCAACGACAATATGATAGCTGTCGTCGCTGGGTTCAAAACCCGGAATTCGTTTAGCCCAGAGGAAGAACCTGTGAGCGGAGAAAGCAATATTCTTGCACCTTTTGAGAACCTGCTCGACGAGGTCAGTGGATACATTGGAGGAGAAGGAGGAGAGGCCGACTTCCAAGTCATGGTGAGGATTTCTACGGTCGCTGAGGATGCGAGATATCTCACTGACGAGAAATGGAAGTGTTGGGTCTGATCCTGCACGTGCTTCTGTAGCGAAAGAAGTGAATGAGCGTTGGTGAGCGAAACGATTGGTTCTTAAGAGAGAGGAGAAGAGTGAAATAGAGATGCGGAATTTGGAGGAACAGGCTCTAATGGCCATTACAGAGATTGGTTACAAAGAACAGTGGTCAACATTCTTCTTGAAATTTGGAATTTGAAGGAGAAGGCTCTTCGAATGAGTGAAAGAGAGTGCGAGAGCATGTTCTGGGTGTCTCCTAGGAAGAAGTAAAATAACCATTGATCAAAATCAAGACGTAAGTCGTGTTCTTGAGAAAAATAGCTATAGCTTCCAAATTACAAACTGGAAAACGGAGAAGCGGCTACCGATTCAATAATGAAGAAGTGGCTTTTGACAAATTGAAACACACCCAGATGAGAAATCCGGTGAAAGTATGAACCAACAGGAGG

mRNA sequence

CGAAACAAATATTTATTCATTGTATTTTAAAAGGAGTTTGTTGTACAGTCCTGGAACCCCCCACTCCTGGTGTTACACCAGAACGAGTAAAAACTTTGGTCTATTGGGTAAGAAGTGTTAAAAGAAACGGCTAGTATATTAGCACAAAACTATGGCAAGTCAAGAAAACATAAAGTTGCTCTGGCCTTATGAGAAACCGAATCATAAATAAATTACAAAAAGCCCGTACTTGGATGATTGGTGCAATTTAATCTTTCTTCAGTCACTTTCATGCTCTGTCTCTTCATTTTTTAACATCGACTGAGCCTCGCGACGTTTTCCACCACTCATCAGGTTGGCAAGCTCTTGTATGGAGCAAGAAGTGCTTCGTTTCATCTTGTCACCAAGTATCGCAACCTGATCCTTGAACCCTATCCCCAGAAGTCGGTCCCTCAACAACTCAACAGTAGCGATATATGGAGGTATTCCCTCATCAATCATCATTTCAAAGTACTTACATGCTTCTTCTAACTTCCATTTTTTCTTGCAGAAACCATGAATCATGACAGCATAAGTTGAAACAGAAGGGTAAAATCCTCTCTTTCCCATACTCTCCCACACTTCATTGGCTCTGTCAAATCTTCCCACCCTTACTAGCAATTTCAGAACCATATTGTAAGTATGTTTATCTGGAACACATTTGTCCCTATCCATTCTCTTTACCAAGTTAAGAGCACTATTGACCTCGCTATGATCACAATGATAAGCTTGGATTGCATTGTAGGACCATGTATCTGGAGTAACTCCTCTTTCAATCATTTCGTCCAAAATTTGGTAAGCTTCTTCCACGTTTTGATCTTTACAAAGCTTCTTGATAACACAATTATAAGTAAACACATTAGGAAGAAGGTTTTTCCTCTTCGTTCTTTCTAAGACCCTATAAACCGTATGCAAATCATTTTCTTGACAACTTGAGCGGATGAAAATTGAATACGTATCAGCATCTGGGTCAACTCCATTTGAATCCATCTCCAGAAACATCTTGTACGCTTCATCCCTTTTCCCACCTTTGCACAGAGCTTCCAAGAGACTATTGTAAGCAAGCACATCAATCAAACAACCTCGTTCCCGCATTTCATCAAACACCTTCTGGGCATTGTTTGAATCACCCACAACGCCCCAACCCCTAGTCAAAATGCTGTAAGTTTTCACACTCGGATTAAACACACTCTTAACTTTATCAAAAAACTGTTGAGCATGAGCCACATGTTTCCTCTTGCATAGAGTATACAAGAGCTTATCAAGATCATCAACACCAGCCCTAATCCCAAACTCCCCCATTCGATTGAAAGCTCGAATGGCATCTTGAGGCAAATCAGCCCTGCTATAAGCTGTGAAAACATGCCAGAAAAGTTCATGGGTAATCACAGAGGACCGAGTCTCCCTTATTTCTATAAGAAAATCCCACAAAATAGCGAATTGTCCACTGCTTCCCAAGATGTCAACGACAATATGATAGCTGTCGTCGCTGGGTTCAAAACCCGGAATTCGTTTAGCCCAGAGGAAGAACCTGTGAGCGGAGAAAGCAATATTCTTGCACCTTTTGAGAACCTGCTCGACGAGGTCAGTGGATACATTGGAGGAGAAGGAGGAGAGGCCGACTTCCAAGTCATGGTGAGGATTTCTACGGTCGCTGAGGATGCGAGATATCTCACTGACGAGAAATGGAAGTGTTGGGTCTGATCCTGCACGTGCTTCTGTAGCGAAAGAAGTGAATGAGCGTTGGTGAGCGAAACGATTGGTTCTTAAGAGAGAGGAGAAGAGTGAAATAGAGATGCGGAATTTGGAGGAACAGGCTCTAATGGCCATTACAGAGATTGGTTACAAAGAACAGTGGTCAACATTCTTCTTGAAATTTGGAATTTGAAGGAGAAGGCTCTTCGAATGAGTGAAAGAGAGTGCGAGAGCATGTTCTGGGTGTCTCCTAGGAAGAAGTAAAATAACCATTGATCAAAATCAAGACGTAAGTCGTGTTCTTGAGAAAAATAGCTATAGCTTCCAAATTACAAACTGGAAAACGGAGAAGCGGCTACCGATTCAATAATGAAGAAGTGGCTTTTGACAAATTGAAACACACCCAGATGAGAAATCCGGTGAAAGTATGAACCAACAGGAGG

Coding sequence (CDS)

ATGCCAGAAAAGTTCATGGGTAATCACAGAGGACCGAGTCTCCCTTATTTCTATAAGAAAATCCCACAAAATAGCGAATTGTCCACTGCTTCCCAAGATGTCAACGACAATATGATAGCTGTCGTCGCTGGGTTCAAAACCCGGAATTCGTTTAGCCCAGAGGAAGAACCTGTGAGCGGAGAAAGCAATATTCTTGCACCTTTTGAGAACCTGCTCGACGAGGTCAGTGGATACATTGGAGGAGAAGGAGGAGAGGCCGACTTCCAAGTCATGGTGAGGATTTCTACGGTCGCTGAGGATGCGAGATATCTCACTGACGAGAAATGGAAGTGTTGGGTCTGA

Protein sequence

MPEKFMGNHRGPSLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSGESNILAPFENLLDEVSGYIGGEGGEADFQVMVRISTVAEDARYLTDEKWKCWV*
Homology
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BLAST of CSPI04G01480 vs. ExPASy TrEMBL
Match: A0A0A0KWS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004915 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 5.5e-59
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MPEKFMGNHRGPSLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSG 60
           MPEKFMGNHRGPSLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSG
Sbjct: 1   MPEKFMGNHRGPSLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSG 60

Query: 61  ESNILAPFENLLDEVSGYIGGEGGEADFQVMVRISTVAEDARYLTDEKWKCWV 114
           ESNILAPFENLLDEVSGYIGGEGGEADFQVMVRISTVAEDARYLTDEKWKCWV
Sbjct: 61  ESNILAPFENLLDEVSGYIGGEGGEADFQVMVRISTVAEDARYLTDEKWKCWV 113

The following BLAST results are available for this feature:
BLAST of CSPI04G01480 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G01480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWS35.5e-59100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004915 PE=4 SV=1[more]
BLAST of CSPI04G01480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI04G01480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G01480.1CSPI04G01480.1mRNA