CSPI04G01460 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G01460
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr4: 821184 .. 824053 (-)
RNA-Seq Expression	CSPI04G01460
Synteny	CSPI04G01460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCAATTTGCATTAACAAAACCTAAACCCCAAAAACCTCCACCAGAAAACGGAGCCCACAACCAATATCCCACTCTCTCCAATTTCAACCCTTTCCTCCGCTTCCAGCCCTTTCCTTAGTTCTTCCATTCTTCAGACTCCAATCTCACTTCTTTCTCTGAATCGCCTTTCTTTTCAACTAATCTTATTATTGTCTCTGTTATTTATTTTCTGGATTATTGCACCGCCGTTCTTCACGTTATCGCTGTTTATGCTCACATTGCTGTTCTTCGAGTTTGTTTTTATCTGATTTCGCTTCTGGGTGTGTTTCAATTTGTTAAAAAATCACTGCTTCGTTCTTGGATTAGCAGCTGCTTCTTAGTTTTTCAGTTTGTAATTGGGGGCACTGCCTATTTTTCTCAAGGACATGACTTAGATCTTGGTTTTGATGGATGGGTATGTTTCTTCTTCCTGAGGAGACGCCTAGAACATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTCCATCTACAGACACCACTGCGGCTGTATTGAATCACGTTCAGAACTCAAAATCTCTCGAGGAACCTGCCCTTGTGAAGCTTAAAGCAGAACGAGACCCCGAAAAGCTGTTCCATCTCTTTAAAGCAAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTCGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAACATCAGAAGACACTTCCACAGGGACGCCGTGAAGGATTCATTATAAGGATCATAATGCTATATGGTAAGGCTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGGTGCCTTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGAGCCGTGATTTAGGAGCCCTTGAGGCATTTTTAAGTGAAGCTCCTGAAAAATTCGATATTGAGTTGGATATTATTTCTGTTAACATTCTTGTTAAGGCGTTTTGTGATTTCGGTTTTTTAAATAGAGCTTATCTTCTCATGTTAGAGATGGAAAAACTGGGAATAAAACCAGATGTGGTTACCTATACGACATTAATTTCGGCTTCTTACAAGGATAGACAATCTGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTACTACTTTCAATGTGAGAATTCAACATTTGATTGAGAGGAGAAGAGCGTGGGATGCTAATAAATTGATGAAAATGATGAGGAACATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGTCAAGCCGGGTTGCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGTTATAAACCGAATGTCAAAATTTATCAAACCATGATTCATTATCTGTGCAAAAGTGAGGATTTTAATCTTGCACACACAATATGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAGGGCCTCAACAAGATGGGAGAGGCTGGTAAGGCTCAATTGATCCTAGCATTGGCAAGGAAAAGGGTACCTCCTTTCTCTAAAAATCAGTTGGAAGCTTTGAATACCACACTGGCCAATAGCTGAAAAGAGATTTGTAGAATGGTGCTAGATAAAATGTAACAGAAAGCTCAAAAGGAACTCATATTCTTTCTTTTACTTCTATTTGTAAAGTATAAAGCTAATTGGACACTGATTTTTCATGGGGTTACATTTTCAAAAGGTTTCTCTTTCTCTCAGTAATTCAATAAAGTCTGTCTCAAGATGAGAGTTCTGAATGGAACAGCTGACATTTACCATGCCCTCTGTGAGTTACTGTCCAAATCTCTCTCTAGTCTCTACTTGGGCAACACAAATGCATTCCTAAGTACACAGCATTCTATCTACGATACAATTTGTTACTATTCCAACTATTTGTACACATATTTTTACACGTTCTTATTTCTTTTCATTCATTGTCTTTTGGAATTCAATTTGATTTTTAATATTTACCCCAAGAGGCCATTTGTAGGGCTTATGTAATGCATTATACAGCCAAAAAAAAAAGATCCCAAGGGTCATTTGATCATAGTTTTGTTGATGAAGTGCAATAGTGCATATAAGTATTTTATCAATGCGTTTGTTAGGGTAACACTCAGCACATGTAATTTGTTATAGTTTTATTCTTTTGTTAGAAGGTGGATTCTTTGTTGTTACCCTGTTTATGGTATCGCATAGATTTTGCTGCTGTGTTATAAAATCAGGCATGCATGGACTTCTTTTGTGATGGCTTTCTAAGTTCTAATAATCTTTGGTCATTTCGGCATCGGTGCTCTCAATGCAATGGCAATGGGCATAAGGGCAAAACCTTTCCTATTGGATATTTTTTAATGTTGTATAGGTAATTTCAAATTTTGTTTGTTATCATTCCTGAACATCATTTCCAAGCATATGTATATGTATGTATAACAACTCCTTTTGTAGAATTAAAACATCGGTCAGAAAGCATTAGATCATACTTTGCAATGACCTATTCAGACATAGGTGTTGAATTCTTTTAGTATGAATCATTTGTGCTTATTTTGCTCTTACCCTTGCTTTGAATTCATACCTGTTGGAAAAGCAGCAAAGCTTGATTGTAACACGACACAAGTTTTATTATGACACTTCAATCTGGTATATAGACAAGAAACTTAATCTGCAAGACGAAGAAAACAAAAGTAGATTGTCAGAAATAATGTGAAATACATGTATATGCACTGTATATGTTGATTATAAATTTAGTGCCCTTTTACTTCTAGAAACCAAT

mRNA sequence

TGGCAATTTGCATTAACAAAACCTAAACCCCAAAAACCTCCACCAGAAAACGGAGCCCACAACCAATATCCCACTCTCTCCAATTTCAACCCTTTCCTCCGCTTCCAGCCCTTTCCTTAGTTCTTCCATTCTTCAGACTCCAATCTCACTTCTTTCTCTGAATCGCCTTTCTTTTCAACTAATCTTATTATTGTCTCTGTTATTTATTTTCTGGATTATTGCACCGCCGTTCTTCACGTTATCGCTGTTTATGCTCACATTGCTGTTCTTCGAGTTTGTTTTTATCTGATTTCGCTTCTGGGTGTGTTTCAATTTGTTAAAAAATCACTGCTTCGTTCTTGGATTAGCAGCTGCTTCTTAGTTTTTCAGTTTGTAATTGGGGGCACTGCCTATTTTTCTCAAGGACATGACTTAGATCTTGGTTTTGATGGATGGGTATGTTTCTTCTTCCTGAGGAGACGCCTAGAACATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTCCATCTACAGACACCACTGCGGCTGTATTGAATCACGTTCAGAACTCAAAATCTCTCGAGGAACCTGCCCTTGTGAAGCTTAAAGCAGAACGAGACCCCGAAAAGCTGTTCCATCTCTTTAAAGCAAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTCGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAACATCAGAAGACACTTCCACAGGGACGCCGTGAAGGATTCATTATAAGGATCATAATGCTATATGGTAAGGCTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGGTGCCTTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGAGCCGTGATTTAGGAGCCCTTGAGGCATTTTTAAGTGAAGCTCCTGAAAAATTCGATATTGAGTTGGATATTATTTCTGTTAACATTCTTGTTAAGGCGTTTTGTGATTTCGGTTTTTTAAATAGAGCTTATCTTCTCATGTTAGAGATGGAAAAACTGGGAATAAAACCAGATGTGGTTACCTATACGACATTAATTTCGGCTTCTTACAAGGATAGACAATCTGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTACTACTTTCAATGTGAGAATTCAACATTTGATTGAGAGGAGAAGAGCGTGGGATGCTAATAAATTGATGAAAATGATGAGGAACATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGTCAAGCCGGGTTGCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGTTATAAACCGAATGTCAAAATTTATCAAACCATGATTCATTATCTGTGCAAAAGTGAGGATTTTAATCTTGCACACACAATATGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAGGGCCTCAACAAGATGGGAGAGGCTGGTAAGGCTCAATTGATCCTAGCATTGGCAAGGAAAAGGGTACCTCCTTTCTCTAAAAATCAGTTGGAAGCTTTGAATACCACACTGGCCAATAGCTGAAAAGAGATTTGTAGAATGGTGCTAGATAAAATGTAACAGAAAGCTCAAAAGGAACTCATATTCTTTCTTTTACTTCTATTTGTAAAGTATAAAGCTAATTGGACACTGATTTTTCATGGGGTTACATTTTCAAAAGGTTTCTCTTTCTCTCAGTAATTCAATAAAGTCTGTCTCAAGATGAGAGTTCTGAATGGAACAGCTGACATTTACCATGCCCTCTGTGAGTTACTGTCCAAATCTCTCTCTAGTCTCTACTTGGGCAACACAAATGCATTCCTAAGTACACAGCATTCTATCTACGATACAATTTGTTACTATTCCAACTATTTGTACACATATTTTTACACGTTCTTATTTCTTTTCATTCATTGTCTTTTGGAATTCAATTTGATTTTTAATATTTACCCCAAGAGGCCATTTGTAGGGCTTATGTAATGCATTATACAGCCAAAAAAAAAAGATCCCAAGGGTCATTTGATCATAGTTTTGTTGATGAAGTGCAATAGTGCATATAAGTATTTTATCAATGCGTTTGTTAGGGTAACACTCAGCACATGTAATTTGTTATAGTTTTATTCTTTTGTTAGAAGGTGGATTCTTTGTTGTTACCCTGTTTATGGTATCGCATAGATTTTGCTGCTGTGTTATAAAATCAGGCATGCATGGACTTCTTTTGTGATGGCTTTCTAAGTTCTAATAATCTTTGGTCATTTCGGCATCGGTGCTCTCAATGCAATGGCAATGGGCATAAGGGCAAAACCTTTCCTATTGGATATTTTTTAATGTTGTATAGGTAATTTCAAATTTTGTTTGTTATCATTCCTGAACATCATTTCCAAGCATATGTATATGTATGTATAACAACTCCTTTTGTAGAATTAAAACATCGGTCAGAAAGCATTAGATCATACTTTGCAATGACCTATTCAGACATAGGTGTTGAATTCTTTTAGTATGAATCATTTGTGCTTATTTTGCTCTTACCCTTGCTTTGAATTCATACCTGTTGGAAAAGCAGCAAAGCTTGATTGTAACACGACACAAGTTTTATTATGACACTTCAATCTGGTATATAGACAAGAAACTTAATCTGCAAGACGAAGAAAACAAAAGTAGATTGTCAGAAATAATGTGAAATACATGTATATGCACTGTATATGTTGATTATAAATTTAGTGCCCTTTTACTTCTAGAAACCAAT

Coding sequence (CDS)

ATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTCCATCTACAGACACCACTGCGGCTGTATTGAATCACGTTCAGAACTCAAAATCTCTCGAGGAACCTGCCCTTGTGAAGCTTAAAGCAGAACGAGACCCCGAAAAGCTGTTCCATCTCTTTAAAGCAAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTCGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAACATCAGAAGACACTTCCACAGGGACGCCGTGAAGGATTCATTATAAGGATCATAATGCTATATGGTAAGGCTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGGTGCCTTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGAGCCGTGATTTAGGAGCCCTTGAGGCATTTTTAAGTGAAGCTCCTGAAAAATTCGATATTGAGTTGGATATTATTTCTGTTAACATTCTTGTTAAGGCGTTTTGTGATTTCGGTTTTTTAAATAGAGCTTATCTTCTCATGTTAGAGATGGAAAAACTGGGAATAAAACCAGATGTGGTTACCTATACGACATTAATTTCGGCTTCTTACAAGGATAGACAATCTGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTACTACTTTCAATGTGAGAATTCAACATTTGATTGAGAGGAGAAGAGCGTGGGATGCTAATAAATTGATGAAAATGATGAGGAACATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGTCAAGCCGGGTTGCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGTTATAAACCGAATGTCAAAATTTATCAAACCATGATTCATTATCTGTGCAAAAGTGAGGATTTTAATCTTGCACACACAATATGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAGGGCCTCAACAAGATGGGAGAGGCTGGTAAGGCTCAATTGATCCTAGCATTGGCAAGGAAAAGGGTACCTCCTTTCTCTAAAAATCAGTTGGAAGCTTTGAATACCACACTGGCCAATAGCTGA

Protein sequence

MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS*

Homology

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BLAST of CSPI04G01460 vs. ExPASy Swiss-Prot
Match: Q8GW57 (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 516.2 bits (1328), Expect = 3.4e-145
Identity = 258/400 (64.50%), Postives = 310/400 (77.50%), Query Frame = 0


Query: 1   MLSLRPIRRFCH----AATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHL 60
           MLSLR IRRFCH    AAT I    T +   N +Q  K LEEPALVKLK+ERDPEKL++L
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYG 120
           FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIMLYG
Sbjct: 61  FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDI 180
           KA M K ALDTF++M LYGC R+VKSFNA L+VL  + DL  +  FL +AP K+ I++D 
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180

Query: 181 ISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 240
           +S NI +K+FC+ G L+ AY+ M EMEK G+ PDVVTYTTLISA YK  +  I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 240

Query: 241 MVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGL 300
           MVL+GC PNLTTFNVRIQ L+ RRRAWDAN L+ +M  + + PD +TYN+VIKGF  A  
Sbjct: 241 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 300

Query: 301 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHS 360
            DMA+RVY+A+HG GYKPN+KIYQTMIHYLCK+ +F+LA+T+CKD M K W+PN+DT+  
Sbjct: 301 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 360

Query: 361 LLKGLNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTL 397
           LLKGL K G+  +A+ I+ L  +RVPPF   QL +L + L
Sbjct: 361 LLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397

[Close]

BLAST of CSPI04G01460 vs. ExPASy Swiss-Prot
Match: Q9M065 (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.1e-56
Identity = 129/397 (32.49%), Postives = 216/397 (54.41%), Query Frame = 0


Query: 2   LSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA       TTA     +  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAAA---DGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+A M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFD-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + S++   +     E P++++ I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185

Query: 182 NILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVL 241
            IL+K++CD G   +A  +M +M+  G++   + +TT++S+ YK  + E+++ LWN MV 
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245

Query: 242 RGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDM 301
           +GC  +   +NVRI    ++       +L++ M ++G+ PD ++YN ++  +C+ G+LD 
Sbjct: 246 KGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305

Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLK 361
           AK+VY  L G+   PN   ++T+I +LC S  +   + I K ++  +  P+ +T+  L+ 
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365

Query: 362 GLNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTL 397
           GL +  +   A+ ++   +K+ PP   N  + L   L
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEEL 393

[Close]

BLAST of CSPI04G01460 vs. ExPASy Swiss-Prot
Match: Q8LE47 (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 5.2e-53
Identity = 121/387 (31.27%), Postives = 215/387 (55.56%), Query Frame = 0


Query: 2   LSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANA 61
           L+  P  R   +A+ I S D+   +      SK   + AL  LK+E+DP+++  + +A +
Sbjct: 17  LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76

Query: 62  HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEM 121
                  +R AF   V  LA  + F  + +LL+   +  P  + E F    I+LY +A M
Sbjct: 77  LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136

Query: 122 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 181
           + H+L  F D+  +   RTVKS NA+L   + ++D    +    E P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196

Query: 182 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 241
            ++K FC+ G  + +Y ++ EME+ GIKP+  ++  +IS  Y + +S+    +  +M  R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256

Query: 242 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 301
           G    ++T+N+RIQ L +R+++ +A  L+  M + G+ P+ VTY+ +I GFC     + A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316

Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 361
           K+++  +   G KP+ + Y T+I+YLCK  DF  A ++CK++M KNW P+   + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376

Query: 362 LNKMGEAGKAQLILALARKRVPPFSKN 388
           L K  +  +A+ ++   +++   F++N
Sbjct: 377 LAKDSKVEEAKELIGQVKEK---FTRN 395

[Close]

BLAST of CSPI04G01460 vs. ExPASy Swiss-Prot
Match: Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.4e-52
Identity = 121/373 (32.44%), Postives = 195/373 (52.28%), Query Frame = 0


Query: 6   PIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV+       A ++  Q S +    +LV    ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVVSEPTAVTAAISPPQKSLT----SLV--NGERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAL 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII LYGKA M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKA 185
             F +M    C R+V SFNA+L     S+    +E   +E P K  I+ DI+S N L+KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPN 245
            C+   L  A  L+ E+E  G+KPD+VT+ TL+ +SY   Q E+   +W  MV +    +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255

Query: 246 LTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYS 305
           + T+N R+  L    ++ +   L   ++  G+ PD  ++N +I+G    G +D A+  Y 
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315

Query: 306 ALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMG 365
            +   GY+P+   +  ++  +CK+ DF  A  + K+  +K +     T+  L+  L K  
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375

Query: 366 EAGKAQLILALAR 379
           +  +A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382

[Close]

BLAST of CSPI04G01460 vs. ExPASy Swiss-Prot
Match: Q9SAB4 (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g11630 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-47
Identity = 104/372 (27.96%), Postives = 200/372 (53.76%), Query Frame = 0


Query: 17  IPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDT 76
           + S+ ++   L  + + +      L  LK+E +P+++  + ++ + +     +R  F   
Sbjct: 22  LKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVA 81

Query: 77  VSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEMIKHALDTFYDMHLYG 136
           V  LA  + F  +  LL+   +  P  + E F +R I+LYG+A M+  ++ TF ++  Y 
Sbjct: 82  VVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYE 141

Query: 137 CLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFLNRA 196
             RTVKS NA+L   + ++D         E P+ + IE D+ + N +++  C+ G  + +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201

Query: 197 YLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVRIQH 256
           Y ++ EME+  IKP   ++  +I   YK+ + +    +  +M   G    + T+N+ IQ 
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261

Query: 257 LIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPN 316
           L +R+++ +A  L+  + +  + P+ VTY+L+I GFC    LD A  ++  +  +GYKP+
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321

Query: 317 VKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAGKAQLILA 376
            + Y T+IH LCK  DF  A  +C+++M KNW P+   +  L+ GL    +  +A+ ++A
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA 381

Query: 377 LARKRVPPFSKN 388
           + +++   F++N
Sbjct: 382 VVKEK---FTRN 390

[Close]

BLAST of CSPI04G01460 vs. ExPASy TrEMBL
Match: A0A0A0KTI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004890 PE=4 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.3e-227
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 400
           LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS
Sbjct: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 399

[Close]

BLAST of CSPI04G01460 vs. ExPASy TrEMBL
Match: A0A5A7TM99 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001650 PE=4 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 6.1e-222
Identity = 387/399 (96.99%), Postives = 396/399 (99.25%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPST TTAAVLNHVQNSK+LEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTGTTAAVLNHVQNSKALEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFL+EAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLNEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           ILVKAFCDFGFLNRAYLLML+MEKLGIKPDVVTYTTLISASYKDR+SEISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLDMEKLGIKPDVVTYTTLISASYKDRRSEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNLTTFNVRIQHLIERRRAWDANKLMK+MR+IGIVPDEVTYNLVIKGFCQAGLLDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKVMRSIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCKS DFNLAHTICKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSGDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 400
           LNKMG+AGKAQLIL+LARKR+PPFSK QLEALNTTLANS
Sbjct: 361 LNKMGQAGKAQLILSLARKRIPPFSKTQLEALNTTLANS 399

[Close]

BLAST of CSPI04G01460 vs. ExPASy TrEMBL
Match: A0A1S4E048 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494891 PE=4 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 6.1e-222
Identity = 387/399 (96.99%), Postives = 396/399 (99.25%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPST TTAAVLNHVQNSK+LEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTGTTAAVLNHVQNSKALEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFL+EAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLNEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           ILVKAFCDFGFLNRAYLLML+MEKLGIKPDVVTYTTLISASYKDR+SEISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLDMEKLGIKPDVVTYTTLISASYKDRRSEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNLTTFNVRIQHLIERRRAWDANKLMK+MR+IGIVPDEVTYNLVIKGFCQAGLLDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKVMRSIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCKS DFNLAHTICKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSGDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 400
           LNKMG+AGKAQLIL+LARKR+PPFSK QLEALNTTLANS
Sbjct: 361 LNKMGQAGKAQLILSLARKRIPPFSKTQLEALNTTLANS 399

[Close]

BLAST of CSPI04G01460 vs. ExPASy TrEMBL
Match: A0A6J1INV5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479183 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 2.0e-204
Identity = 354/398 (88.94%), Postives = 379/398 (95.23%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI ST+T+ AVLNHVQNSK +EEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHA+DTFY+MHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL EAPEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLL+LEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNL +FNVRIQ+L++RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+S DFN+A+T+CKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLAN 399
           LNKMG+ GKAQLIL+LARKRVPPFS  QLEALNTT+AN
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTMAN 398

[Close]

BLAST of CSPI04G01460 vs. ExPASy TrEMBL
Match: A0A6J1GVU5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111457895 PE=4 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 2.9e-203
Identity = 351/398 (88.19%), Postives = 377/398 (94.72%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAAT+I S++T AAVLNHVQNSK +EEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATIIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHA+DTFY+MHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL EAPEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYL +LEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNL +FNVRIQ+L++RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+S DFN+A+T+CKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLAN 399
           LNKMG+ GKAQLIL+LARKRVPPFS  QLEALNT +AN
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTIMAN 398

[Close]

BLAST of CSPI04G01460 vs. NCBI nr
Match: XP_004152207.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucumis sativus] >XP_031740338.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucumis sativus] >KGN52878.1 hypothetical protein Csa_014756 [Cucumis sativus])

HSP 1 Score: 798.5 bits (2061), Expect = 2.6e-227
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 400
           LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS
Sbjct: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 399

[Close]

BLAST of CSPI04G01460 vs. NCBI nr
Match: XP_016901584.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucumis melo] >KAA0044432.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK29559.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 779.6 bits (2012), Expect = 1.3e-221
Identity = 387/399 (96.99%), Postives = 396/399 (99.25%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIPST TTAAVLNHVQNSK+LEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTGTTAAVLNHVQNSKALEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFL+EAPEKFDIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLNEAPEKFDIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           ILVKAFCDFGFLNRAYLLML+MEKLGIKPDVVTYTTLISASYKDR+SEISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLDMEKLGIKPDVVTYTTLISASYKDRRSEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNLTTFNVRIQHLIERRRAWDANKLMK+MR+IGIVPDEVTYNLVIKGFCQAGLLDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKVMRSIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCKS DFNLAHTICKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSGDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 400
           LNKMG+AGKAQLIL+LARKR+PPFSK QLEALNTTLANS
Sbjct: 361 LNKMGQAGKAQLILSLARKRIPPFSKTQLEALNTTLANS 399

[Close]

BLAST of CSPI04G01460 vs. NCBI nr
Match: XP_038901360.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901371.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901381.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901390.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida])

HSP 1 Score: 723.0 bits (1865), Expect = 1.4e-204
Identity = 358/399 (89.72%), Postives = 377/399 (94.49%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAAT   STDT AAVLNHVQNSK LEEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAAT---STDTAAAVLNHVQNSKPLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHALDTFYDMHLYGC RTVKSFNAVLKVLMK+RDLGALEAFLSEAPEKF+IELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLSEAPEKFNIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLLM+EMEK+GI+PDVVTYTTLISA YKD + EISNGLWNLMVLR
Sbjct: 181 IVVKAFCDLGILNRAYLLMVEMEKVGIRPDVVTYTTLISAFYKDNRCEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GC PN+ +FNVRIQ+LI+RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCFPNVASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHG+GYKPNVKIYQTM+HYLC+S DFNLA+T+CKD MNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGNGYKPNVKIYQTMLHYLCRSGDFNLAYTMCKDTMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 400
           LNKMG+ G+AQ IL LARKRVPPFS  QLEALNTTLANS
Sbjct: 361 LNKMGQPGRAQFILTLARKRVPPFSTAQLEALNTTLANS 396

[Close]

BLAST of CSPI04G01460 vs. NCBI nr
Match: XP_023527765.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527766.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527767.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527768.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527769.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527770.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 721.8 bits (1862), Expect = 3.1e-204
Identity = 354/398 (88.94%), Postives = 378/398 (94.97%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI S++T AAVLNHVQNSK +EEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHA+DTFY+MHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL EAPEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYL +LEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNL +FNVRIQ+L++RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+S DFN+A+T+CKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLAN 399
           LNKMG+ GKAQLIL+LARKRVPPFS  QLEALNTT+AN
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTMAN 398

[Close]

BLAST of CSPI04G01460 vs. NCBI nr
Match: XP_022979497.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979498.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979499.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979500.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979501.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979502.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 721.5 bits (1861), Expect = 4.1e-204
Identity = 354/398 (88.94%), Postives = 379/398 (95.23%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI ST+T+ AVLNHVQNSK +EEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180
           IKHA+DTFY+MHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL EAPEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLL+LEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300
           GCLPNL +FNVRIQ+L++RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+S DFN+A+T+CKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLAN 399
           LNKMG+ GKAQLIL+LARKRVPPFS  QLEALNTT+AN
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTMAN 398

[Close]

BLAST of CSPI04G01460 vs. TAIR 10
Match: AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 516.2 bits (1328), Expect = 2.4e-146
Identity = 258/400 (64.50%), Postives = 310/400 (77.50%), Query Frame = 0


Query: 1   MLSLRPIRRFCH----AATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHL 60
           MLSLR IRRFCH    AAT I    T +   N +Q  K LEEPALVKLK+ERDPEKL++L
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYG 120
           FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIMLYG
Sbjct: 61  FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDI 180
           KA M K ALDTF++M LYGC R+VKSFNA L+VL  + DL  +  FL +AP K+ I++D 
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180

Query: 181 ISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNL 240
           +S NI +K+FC+ G L+ AY+ M EMEK G+ PDVVTYTTLISA YK  +  I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 240

Query: 241 MVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGL 300
           MVL+GC PNLTTFNVRIQ L+ RRRAWDAN L+ +M  + + PD +TYN+VIKGF  A  
Sbjct: 241 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 300

Query: 301 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHS 360
            DMA+RVY+A+HG GYKPN+KIYQTMIHYLCK+ +F+LA+T+CKD M K W+PN+DT+  
Sbjct: 301 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 360

Query: 361 LLKGLNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTL 397
           LLKGL K G+  +A+ I+ L  +RVPPF   QL +L + L
Sbjct: 361 LLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397

[Close]

BLAST of CSPI04G01460 vs. TAIR 10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 219.9 bits (559), Expect = 3.6e-57
Identity = 129/397 (32.49%), Postives = 216/397 (54.41%), Query Frame = 0


Query: 2   LSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA       TTA     +  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAAA---DGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+A M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFD-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + S++   +     E P++++ I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185

Query: 182 NILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVL 241
            IL+K++CD G   +A  +M +M+  G++   + +TT++S+ YK  + E+++ LWN MV 
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245

Query: 242 RGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDM 301
           +GC  +   +NVRI    ++       +L++ M ++G+ PD ++YN ++  +C+ G+LD 
Sbjct: 246 KGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305

Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLK 361
           AK+VY  L G+   PN   ++T+I +LC S  +   + I K ++  +  P+ +T+  L+ 
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365

Query: 362 GLNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTL 397
           GL +  +   A+ ++   +K+ PP   N  + L   L
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEEL 393

[Close]

BLAST of CSPI04G01460 vs. TAIR 10
Match: AT1G61870.1 (pentatricopeptide repeat 336 )

HSP 1 Score: 209.9 bits (533), Expect = 3.7e-54
Identity = 121/387 (31.27%), Postives = 215/387 (55.56%), Query Frame = 0


Query: 2   LSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANA 61
           L+  P  R   +A+ I S D+   +      SK   + AL  LK+E+DP+++  + +A +
Sbjct: 17  LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76

Query: 62  HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEM 121
                  +R AF   V  LA  + F  + +LL+   +  P  + E F    I+LY +A M
Sbjct: 77  LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136

Query: 122 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 181
           + H+L  F D+  +   RTVKS NA+L   + ++D    +    E P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196

Query: 182 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 241
            ++K FC+ G  + +Y ++ EME+ GIKP+  ++  +IS  Y + +S+    +  +M  R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256

Query: 242 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 301
           G    ++T+N+RIQ L +R+++ +A  L+  M + G+ P+ VTY+ +I GFC     + A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316

Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 361
           K+++  +   G KP+ + Y T+I+YLCK  DF  A ++CK++M KNW P+   + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376

Query: 362 LNKMGEAGKAQLILALARKRVPPFSKN 388
           L K  +  +A+ ++   +++   F++N
Sbjct: 377 LAKDSKVEEAKELIGQVKEK---FTRN 395

[Close]

BLAST of CSPI04G01460 vs. TAIR 10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 206.8 bits (525), Expect = 3.2e-53
Identity = 121/373 (32.44%), Postives = 195/373 (52.28%), Query Frame = 0


Query: 6   PIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV+       A ++  Q S +    +LV    ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVVSEPTAVTAAISPPQKSLT----SLV--NGERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAL 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII LYGKA M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKA 185
             F +M    C R+V SFNA+L     S+    +E   +E P K  I+ DI+S N L+KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPN 245
            C+   L  A  L+ E+E  G+KPD+VT+ TL+ +SY   Q E+   +W  MV +    +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255

Query: 246 LTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYS 305
           + T+N R+  L    ++ +   L   ++  G+ PD  ++N +I+G    G +D A+  Y 
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315

Query: 306 ALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMG 365
            +   GY+P+   +  ++  +CK+ DF  A  + K+  +K +     T+  L+  L K  
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375

Query: 366 EAGKAQLILALAR 379
           +  +A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382

[Close]

BLAST of CSPI04G01460 vs. TAIR 10
Match: AT1G11630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-48
Identity = 104/372 (27.96%), Postives = 200/372 (53.76%), Query Frame = 0


Query: 17  IPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDT 76
           + S+ ++   L  + + +      L  LK+E +P+++  + ++ + +     +R  F   
Sbjct: 22  LKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVA 81

Query: 77  VSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEMIKHALDTFYDMHLYG 136
           V  LA  + F  +  LL+   +  P  + E F +R I+LYG+A M+  ++ TF ++  Y 
Sbjct: 82  VVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYE 141

Query: 137 CLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFLNRA 196
             RTVKS NA+L   + ++D         E P+ + IE D+ + N +++  C+ G  + +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201

Query: 197 YLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVRIQH 256
           Y ++ EME+  IKP   ++  +I   YK+ + +    +  +M   G    + T+N+ IQ 
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261

Query: 257 LIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPN 316
           L +R+++ +A  L+  + +  + P+ VTY+L+I GFC    LD A  ++  +  +GYKP+
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321

Query: 317 VKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAGKAQLILA 376
            + Y T+IH LCK  DF  A  +C+++M KNW P+   +  L+ GL    +  +A+ ++A
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA 381

Query: 377 LARKRVPPFSKN 388
           + +++   F++N
Sbjct: 382 VVKEK---FTRN 390

The following BLAST results are available for this feature:

BLAST of CSPI04G01460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW57	3.4e-145	64.50	Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop...	[more]
Q9M065	5.1e-56	32.49	Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop...	[more]
Q8LE47	5.2e-53	31.27	Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop...	[more]
Q9LG23	4.4e-52	32.44	Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop...	[more]
Q9SAB4	1.5e-47	27.96	Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidop...	[more]

BLAST of CSPI04G01460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTI5	1.3e-227	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004890 PE=4 SV=1	[more]
A0A5A7TM99	6.1e-222	96.99	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4E048	6.1e-222	96.99	pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Cucumis ...	[more]
A0A6J1INV5	2.0e-204	88.94	pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc...	[more]
A0A6J1GVU5	2.9e-203	88.19	pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc...	[more]

BLAST of CSPI04G01460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152207.1	2.6e-227	100.00	pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucumis sa...	[more]
XP_016901584.1	1.3e-221	96.99	PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ...	[more]
XP_038901360.1	1.4e-204	89.72	pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa ...	[more]
XP_023527765.1	3.1e-204	88.94	pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita ...	[more]
XP_022979497.1	4.1e-204	88.94	pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur...	[more]

BLAST of CSPI04G01460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80150.1	2.4e-146	64.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G36680.1	3.6e-57	32.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G61870.1	3.7e-54	31.27	pentatricopeptide repeat 336	[more]
AT1G55890.1	3.2e-53	32.44	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11630.1	1.0e-48	27.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 111..136 e-value: 0.35 score: 11.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 282..316 e-value: 2.7E-7 score: 28.3 coord: 178..211 e-value: 7.9E-4 score: 17.4 coord: 318..350 e-value: 4.7E-4 score: 18.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 198..253 e-value: 9.6E-10 score: 38.4
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 276..303 e-value: 3.8E-9 score: 36.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 10.435215
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 210..244 score: 9.032168
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..279 score: 8.560833
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 280..314 score: 12.320559
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 104..230 e-value: 4.0E-21 score: 77.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 231..399 e-value: 1.6E-29 score: 105.3
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 1..392
None	No IPR available	PANTHER	PTHR46128:SF6	OS08G0499800 PROTEIN	coord: 1..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G01460.1	CSPI04G01460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding