CSPI04G01420 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAATTCATTTAACTGTATTTGAAAAATCTAAAGAAATGTTATAAAATAAATTAGTATTAAAAATGGTATCAAACACAGTTTGGAAAGAAAAAAAAAAGGAATCTTTTGTTTGGAAAGTTCTGCCTTGAATCCACGTTTGTTTTTATCATCTCTTTTCCGGTGGAAAAAAGAAAAATGAACGATCTATATTTTACAGGGATCTTCACCAAAATTCGGATAAATGCTGTCTGGAAGCACGAGAGTCTGTCGAAGTGGACAAGTTACTAAATTTATGTGAGAATGGATGCTGTTGTTCTAACAACAAAGATTCCTTCCACTTCCACTTGCTTCAACTCCCACTTCCCCATCCATTTCTGAACGATTTCTTTTCCCAAAACCCTCAAATCCAAGAGGTTGTTTGTATTTTCCTCTTTTTCTTGCCACTATCTATCTTTCTTCTTTATCTCTTGGTCTTTGTTGCTTTGATCTTGAGAGAAAGATAATGGGGTTTTGTTTTAGGGATTGATATTCTGTTTTTCCCTCATTTTGAATGCCAGAGAGGGGGTTCTCCTGTTTTGTTTGCTGATATTGCAGGTAATTTCATTATTCAATTGACCCAATAACGAGTTTGTTGTTCTTGTGATGGGAAATTCTTGACTGGGTTTCTTATTGTCGAAACCGATGCTTTTTAGGATTGACAATGACTTTCCAGCTTTTAAGCACTCAATCTTGTATATCTGCTTATGTAAATACTCGTAGAATTCAGCTACAATGGAGGTTGAATCCTGTTCAGGCTTTGCCACCATCAACTCTATTGCACACTGATGAAAGTGAACATTTTCCAGAATCTAAAAAGACTTCTGGGTTCAGCTCAGTATTGAAAACGAATAAAGATTCAACTGGTATTTTGCTAAGTCAATCAAATACAGTGGGTATATTAGGAGGATCTTCTGTGAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGACAATCTCAATCTGGTCTCCCTTTTGTTCTTTGCTCTGATCCAACTCTTAGTAACGAGCTCCAAGTGTTTGATAAAAGTTCTCACCCAGTTCTCAACTACAAGAGTGAGGATTTAGGATTGGACTCTGAGTTAGTAGTGGAGAGTTTGAAGAGTAAGAGAACTTTTCTCGAGAATTCAGGTGCTCGTTGCATTGTAATGCCTTGCCACATCTCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCACATGGCTGATTGTGTTGCTAGAGAGCTCAAGGAAGCAAAGTTGAAGCCACTCGAAGCTGGGAGTCCCTTACGGATTGGAGTTCTTGCAACCAATGCAATTTTAAGGGCAGGGTATTATCAGGAGAAACTGCAGAATGAAGTAGGCATCTCTTCATTGTTTTTGAACTTTATACTTCATAGCTTGAAGATGTTATTCCAGTTTTTGAGTCATTTTAACCATAAGGGAATCATCCTTGAATATATATTTATATATACAGGGATTTGAGGTGGTACTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAAGACATAGAAGGGGCAAGGAATTTACTGAGAATTGCACTTCAAGTTCTTCTGGTGAGGGCTGTCAACTCTGTCATCCTTGCCTCTGATGATATAAAGGATATTTTGCCCTTGAACGATCCCCTTCTTAGGAGATGCATTGACCCAATGGACGCATTAGCAAGGTCCACTATCAATTGGGCACAATGTGCTGAATAAGGTATTTGGTCCTAATCCTCTTCCTGTTACACTTTTCAAGATCTCAATTTGTTGTAAATTTGTTTATCCTCAGAACTTTGCACAAAAGAAATTATCAGGAAATATGTTTAAAGTTAGCATTGTTTTAAATTGTCGAGTTATGAATAATGTACGAGATAGTTAGAATTGCTTGATCATCCCATATGACCTCTCTCGCATTTCATAGCAGAAGGAAAACCATTAATCATGTAGAATTAGAAATATGGAAATTATATGAATACTGGTATACTGATGTTCTTCTCCTTGTTAGTTTCAGCCTGCAATTTACTTCTCATTTAGGTAATTACTATTCGTTTATGAAAAGGTTATGACCCTATATACAGTTAAGAAGGACTTTTTGGCTCTTCCACTTTTCTCAATCTTATTCTCTTATTGGTTTCCTCATAAAGGAACTCTCTCCGGGCCTTCAGGTTTACCTTGGCAACTGGCTCTTTTATGTCGGGTTTCTTTTGACAATAAGGTGATATGGTAATCACATTTTTCATTTAGACATCACGAGTCCATGGAAAAGATGGGAACCAAGCTCATCAAGTGATGTAAATAGATCGGTGGGGAAAAAGTGTTTGATGATGATGCTGATACTAGTCTTAGTAGATGCATGTACTGTTTCT AAATAATTCATTTAACTGTATTTGAAAAATCTAAAGAAATGTTATAAAATAAATTAGTATTAAAAATGGTATCAAACACAGTTTGGAAAGAAAAAAAAAAGGAATCTTTTGTTTGGAAAGTTCTGCCTTGAATCCACGTTTGTTTTTATCATCTCTTTTCCGGTGGAAAAAAGAAAAATGAACGATCTATATTTTACAGGGATCTTCACCAAAATTCGGATAAATGCTGTCTGGAAGCACGAGAGTCTGTCGAAGTGGACAAGTTACTAAATTTATGTGAGAATGGATGCTGTTGTTCTAACAACAAAGATTCCTTCCACTTCCACTTGCTTCAACTCCCACTTCCCCATCCATTTCTGAACGATTTCTTTTCCCAAAACCCTCAAATCCAAGAGGTTGTTTGTATTTTCCTCTTTTTCTTGCCACTATCTATCTTTCTTCTTTATCTCTTGGTCTTTGTTGCTTTGATCTTGAGAGAAAGATAATGGGGTTTTGTTTTAGGGATTGATATTCTGTTTTTCCCTCATTTTGAATGCCAGAGAGGGGGTTCTCCTGTTTTGTTTGCTGATATTGCAGGTAATTTCATTATTCAATTGACCCAATAACGAGTTTGTTGTTCTTGTGATGGGAAATTCTTGACTGGGTTTCTTATTGTCGAAACCGATGCTTTTTAGGATTGACAATGACTTTCCAGCTTTTAAGCACTCAATCTTGTATATCTGCTTATGTAAATACTCGTAGAATTCAGCTACAATGGAGGTTGAATCCTGTTCAGGCTTTGCCACCATCAACTCTATTGCACACTGATGAAAGTGAACATTTTCCAGAATCTAAAAAGACTTCTGGGTTCAGCTCAGTATTGAAAACGAATAAAGATTCAACTGGTATTTTGCTAAGTCAATCAAATACAGTGGGTATATTAGGAGGATCTTCTGTGAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGACAATCTCAATCTGGTCTCCCTTTTGTTCTTTGCTCTGATCCAACTCTTAGTAACGAGCTCCAAGTGTTTGATAAAAGTTCTCACCCAGTTCTCAACTACAAGAGTGAGGATTTAGGATTGGACTCTGAGTTAGTAGTGGAGAGTTTGAAGAGTAAGAGAACTTTTCTCGAGAATTCAGGTGCTCGTTGCATTGTAATGCCTTGCCACATCTCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCACATGGCTGATTGTGTTGCTAGAGAGCTCAAGGAAGCAAAGTTGAAGCCACTCGAAGCTGGGAGTCCCTTACGGATTGGAGTTCTTGCAACCAATGCAATTTTAAGGGCAGGGTATTATCAGGAGAAACTGCAGAATGAAGGATTTGAGGTGGTACTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAAGACATAGAAGGGGCAAGGAATTTACTGAGAATTGCACTTCAAGTTCTTCTGGTGAGGGCTGTCAACTCTGTCATCCTTGCCTCTGATGATATAAAGGATATTTTGCCCTTGAACGATCCCCTTCTTAGGAGATGCATTGACCCAATGGACGCATTAGCAAGGTCCACTATCAATTGGGCACAATGTGCTGAATAAGGAACTCTCTCCGGGCCTTCAGGTTTACCTTGGCAACTGGCTCTTTTATGTCGGGTTTCTTTTGACAATAAGGTGATATGGTAATCACATTTTTCATTTAGACATCACGAGTCCATGGAAAAGATGGGAACCAAGCTCATCAAGTGATGTAAATAGATCGGTGGGGAAAAAGTGTTTGATGATGATGCTGATACTAGTCTTAGTAGATGCATGTACTGTTTCT ATGACTTTCCAGCTTTTAAGCACTCAATCTTGTATATCTGCTTATGTAAATACTCGTAGAATTCAGCTACAATGGAGGTTGAATCCTGTTCAGGCTTTGCCACCATCAACTCTATTGCACACTGATGAAAGTGAACATTTTCCAGAATCTAAAAAGACTTCTGGGTTCAGCTCAGTATTGAAAACGAATAAAGATTCAACTGGTATTTTGCTAAGTCAATCAAATACAGTGGGTATATTAGGAGGATCTTCTGTGAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGACAATCTCAATCTGGTCTCCCTTTTGTTCTTTGCTCTGATCCAACTCTTAGTAACGAGCTCCAAGTGTTTGATAAAAGTTCTCACCCAGTTCTCAACTACAAGAGTGAGGATTTAGGATTGGACTCTGAGTTAGTAGTGGAGAGTTTGAAGAGTAAGAGAACTTTTCTCGAGAATTCAGGTGCTCGTTGCATTGTAATGCCTTGCCACATCTCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCACATGGCTGATTGTGTTGCTAGAGAGCTCAAGGAAGCAAAGTTGAAGCCACTCGAAGCTGGGAGTCCCTTACGGATTGGAGTTCTTGCAACCAATGCAATTTTAAGGGCAGGGTATTATCAGGAGAAACTGCAGAATGAAGGATTTGAGGTGGTACTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAAGACATAGAAGGGGCAAGGAATTTACTGAGAATTGCACTTCAAGTTCTTCTGGTGAGGGCTGTCAACTCTGTCATCCTTGCCTCTGATGATATAAAGGATATTTTGCCCTTGAACGATCCCCTTCTTAGGAGATGCATTGACCCAATGGACGCATTAGCAAGGTCCACTATCAATTGGGCACAATGTGCTGAATAA MTFQLLSTQSCISAYVNTRRIQLQWRLNPVQALPPSTLLHTDESEHFPESKKTSGFSSVLKTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGQSQSGLPFVLCSDPTLSNELQVFDKSSHPVLNYKSEDLGLDSELVVESLKSKRTFLENSGARCIVMPCHISHLWYEDVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILRAGYYQEKLQNEGFEVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDILPLNDPLLRRCIDPMDALARSTINWAQCAE* Homology
BLAST of CSPI04G01420 vs. ExPASy Swiss-Prot
Match: P29079 (Aspartate racemase OS=Enterococcus faecium OX=1352 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.7e-09 Identity = 46/177 (25.99%), Postives = 82/177 (46.33%), Query Frame = 0
BLAST of CSPI04G01420 vs. ExPASy Swiss-Prot
Match: H8L901 (Aspartate racemase OS=Enterococcus faecium (strain Aus0004) OX=1155766 GN=EFAU004_01689 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.7e-09 Identity = 46/177 (25.99%), Postives = 82/177 (46.33%), Query Frame = 0
BLAST of CSPI04G01420 vs. ExPASy Swiss-Prot
Match: P32968 (Uncharacterized protein in pnlA 3'region (Fragment) OS=Pectobacterium carotovorum subsp. carotovorum OX=555 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.2e-08 Identity = 40/147 (27.21%), Postives = 67/147 (45.58%), Query Frame = 0
BLAST of CSPI04G01420 vs. ExPASy Swiss-Prot
Match: P32960 (Broad specificity amino-acid racemase RacX OS=Bacillus subtilis (strain 168) OX=224308 GN=racX PE=1 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 5.1e-06 Identity = 53/245 (21.63%), Postives = 105/245 (42.86%), Query Frame = 0
BLAST of CSPI04G01420 vs. ExPASy TrEMBL
Match: A0A0A0KVD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004850 PE=3 SV=1) HSP 1 Score: 641.0 bits (1652), Expect = 2.8e-180 Identity = 323/327 (98.78%), Postives = 326/327 (99.69%), Query Frame = 0
BLAST of CSPI04G01420 vs. ExPASy TrEMBL
Match: A0A1S4E0P1 (probable amino-acid racemase OS=Cucumis melo OX=3656 GN=LOC103494713 PE=3 SV=1) HSP 1 Score: 637.9 bits (1644), Expect = 2.4e-179 Identity = 321/327 (98.17%), Postives = 325/327 (99.39%), Query Frame = 0
BLAST of CSPI04G01420 vs. ExPASy TrEMBL
Match: A0A5A7TNI1 (Putative amino-acid racemase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001620 PE=3 SV=1) HSP 1 Score: 616.7 bits (1589), Expect = 5.6e-173 Identity = 314/322 (97.52%), Postives = 318/322 (98.76%), Query Frame = 0
BLAST of CSPI04G01420 vs. ExPASy TrEMBL
Match: A0A6J1IUZ5 (uncharacterized protein LOC111479549 OS=Cucurbita maxima OX=3661 GN=LOC111479549 PE=3 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.3e-164 Identity = 300/328 (91.46%), Postives = 314/328 (95.73%), Query Frame = 0
BLAST of CSPI04G01420 vs. ExPASy TrEMBL
Match: A0A6J1GXT9 (uncharacterized protein LOC111457829 OS=Cucurbita moschata OX=3662 GN=LOC111457829 PE=3 SV=1) HSP 1 Score: 588.2 bits (1515), Expect = 2.1e-164 Identity = 300/328 (91.46%), Postives = 313/328 (95.43%), Query Frame = 0
BLAST of CSPI04G01420 vs. NCBI nr
Match: XP_004152211.1 (uncharacterized protein LOC101217164 [Cucumis sativus] >XP_011652967.1 uncharacterized protein LOC101217164 [Cucumis sativus] >KGN52874.1 hypothetical protein Csa_015086 [Cucumis sativus]) HSP 1 Score: 641.0 bits (1652), Expect = 5.8e-180 Identity = 323/327 (98.78%), Postives = 326/327 (99.69%), Query Frame = 0
BLAST of CSPI04G01420 vs. NCBI nr
Match: XP_008454251.1 (PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_008454252.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901533.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901534.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901535.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901536.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901537.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901538.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901539.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901540.1 PREDICTED: probable amino-acid racemase [Cucumis melo]) HSP 1 Score: 637.9 bits (1644), Expect = 4.9e-179 Identity = 321/327 (98.17%), Postives = 325/327 (99.39%), Query Frame = 0
BLAST of CSPI04G01420 vs. NCBI nr
Match: KAA0044428.1 (putative amino-acid racemase [Cucumis melo var. makuwa] >TYK29556.1 putative amino-acid racemase [Cucumis melo var. makuwa]) HSP 1 Score: 616.7 bits (1589), Expect = 1.2e-172 Identity = 314/322 (97.52%), Postives = 318/322 (98.76%), Query Frame = 0
BLAST of CSPI04G01420 vs. NCBI nr
Match: XP_038892083.1 (broad specificity amino-acid racemase RacX [Benincasa hispida]) HSP 1 Score: 608.6 bits (1568), Expect = 3.2e-170 Identity = 310/328 (94.51%), Postives = 320/328 (97.56%), Query Frame = 0
BLAST of CSPI04G01420 vs. NCBI nr
Match: XP_023528030.1 (uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528032.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528033.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528034.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >KAG7018350.1 hypothetical protein SDJN02_20218 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 592.4 bits (1526), Expect = 2.3e-165 Identity = 302/328 (92.07%), Postives = 314/328 (95.73%), Query Frame = 0
BLAST of CSPI04G01420 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family ) HSP 1 Score: 362.8 bits (930), Expect = 2.8e-100 Identity = 180/308 (58.44%), Postives = 243/308 (78.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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