CSPI04G01130 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCTTCAATTTTAATCTCTTCACAGCATCACATTCCTTCTTCAACAATGTCCAATAACACTAGATTCTTTCATGTCCGCAAAGCTTGGAAAATCATCCTACGCCAATGGAAATTGCACTCCCACCGCCGCGCTTTTCCGGTGGATTTCCGCCCCTTGCGCCGGTTCATCAAGCGAATCCTTCACCCAACTCCAACCCCTCTTCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTCCATCTGAAATTCCACAGCCGTCGTGCCCCGTCTGCGTCGGCGGCTCTGTTCCTCATCCCCCGGTTCTCCTGCATAAACCCCAAGGTTGAGTTTGAGAGATACGAGGATTGTGAATGGGAGAGGCGGAATTATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGATCGATTTGAAGGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTATCGTATTTGCGGTTCGATGAGTTTTCTGATGGTGAAGAGTAA CTTTCTTCAATTTTAATCTCTTCACAGCATCACATTCCTTCTTCAACAATGTCCAATAACACTAGATTCTTTCATGTCCGCAAAGCTTGGAAAATCATCCTACGCCAATGGAAATTGCACTCCCACCGCCGCGCTTTTCCGGTGGATTTCCGCCCCTTGCGCCGGTTCATCAAGCGAATCCTTCACCCAACTCCAACCCCTCTTCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTCCATCTGAAATTCCACAGCCGTCGTGCCCCGTCTGCGTCGGCGGCTCTGTTCCTCATCCCCCGGTTCTCCTGCATAAACCCCAAGGTTGAGTTTGAGAGATACGAGGATTGTGAATGGGAGAGGCGGAATTATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGATCGATTTGAAGGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTATCGTATTTGCGGTTCGATGAGTTTTCTGATGGTGAAGAGTAA ATGTCCAATAACACTAGATTCTTTCATGTCCGCAAAGCTTGGAAAATCATCCTACGCCAATGGAAATTGCACTCCCACCGCCGCGCTTTTCCGGTGGATTTCCGCCCCTTGCGCCGGTTCATCAAGCGAATCCTTCACCCAACTCCAACCCCTCTTCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTCCATCTGAAATTCCACAGCCGTCGTGCCCCGTCTGCGTCGGCGGCTCTGTTCCTCATCCCCCGGTTCTCCTGCATAAACCCCAAGGTTGAGTTTGAGAGATACGAGGATTGTGAATGGGAGAGGCGGAATTATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGATCGATTTGAAGGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTATCGTATTTGCGGTTCGATGAGTTTTCTGATGGTGAAGAGTAA MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE* Homology
BLAST of CSPI04G01130 vs. ExPASy TrEMBL
Match: A0A0A0KYA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002580 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83 Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of CSPI04G01130 vs. ExPASy TrEMBL
Match: A0A5D3E0E5 (Neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001360 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 5.2e-58 Identity = 132/167 (79.04%), Postives = 139/167 (83.23%), Query Frame = 0
BLAST of CSPI04G01130 vs. ExPASy TrEMBL
Match: A0A1S3BZI3 (neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo OX=3656 GN=LOC103494743 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 5.2e-58 Identity = 132/167 (79.04%), Postives = 139/167 (83.23%), Query Frame = 0
BLAST of CSPI04G01130 vs. ExPASy TrEMBL
Match: A0A6J1F231 (uncharacterized protein LOC111441455 OS=Cucurbita moschata OX=3662 GN=LOC111441455 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28 Identity = 85/165 (51.52%), Postives = 101/165 (61.21%), Query Frame = 0
BLAST of CSPI04G01130 vs. ExPASy TrEMBL
Match: A0A444XGX3 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g095848 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.9e-13 Identity = 59/156 (37.82%), Postives = 95/156 (60.90%), Query Frame = 0
BLAST of CSPI04G01130 vs. NCBI nr
Match: XP_011652950.1 (uncharacterized protein LOC105435158 [Cucumis sativus] >KGN52841.1 hypothetical protein Csa_014810 [Cucumis sativus]) HSP 1 Score: 318.9 bits (816), Expect = 2.5e-83 Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of CSPI04G01130 vs. NCBI nr
Match: XP_008454304.1 (PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo] >KAA0044406.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa] >TYK29533.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57 Identity = 132/167 (79.04%), Postives = 139/167 (83.23%), Query Frame = 0
BLAST of CSPI04G01130 vs. NCBI nr
Match: XP_038906165.1 (uncharacterized protein LOC120092045 [Benincasa hispida]) HSP 1 Score: 205.3 bits (521), Expect = 4.1e-49 Identity = 123/182 (67.58%), Postives = 136/182 (74.73%), Query Frame = 0
BLAST of CSPI04G01130 vs. NCBI nr
Match: XP_022934217.1 (uncharacterized protein LOC111441455 [Cucurbita moschata]) HSP 1 Score: 136.3 bits (342), Expect = 2.3e-28 Identity = 85/165 (51.52%), Postives = 101/165 (61.21%), Query Frame = 0
BLAST of CSPI04G01130 vs. NCBI nr
Match: KAG6581289.1 (hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018012.1 hypothetical protein SDJN02_19878, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.3 bits (342), Expect = 2.3e-28 Identity = 85/165 (51.52%), Postives = 101/165 (61.21%), Query Frame = 0
BLAST of CSPI04G01130 vs. TAIR 10
Match: AT4G02170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 5.2e-10 Identity = 43/110 (39.09%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of CSPI04G01130 vs. TAIR 10
Match: AT5G38700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 9.9e-09 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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