CSPI04G00970 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCCCTACTCCCATCTCTCCCTCCAAAAAAAATTTGATAGTAATAATAAGAGGAGAAAAAAAGAAAAAAAAAACATTAGGCCATGAAATTTTTTTCAGCCATTTTGTTGGTCCTCTGCCTTTGCATGGCACCTCGGCGCCTGGACGCGGCCGGGGCTGCACAAGAGGAGGGACTAGGCATGATACAGAAAATGTGTGCACAAACTAACTACAAAGACCTTTGCATCACCTCCCTGACTTCTGACCCCAACAGCTTCCCTGCCGACAAGATGGGGCTAGCCTTGGTTGCCCTCCGCCTTGCCTCCTCCAATGCCTCCGACATATCGGAGAGCATCAAGGTGATGCTCAACGAAACGAGCCAAAATAATGAGCCTACAGTACAACAAGCTCTGTTTGATTGCCTTGATGAGTATCTAGAAGCATCTCAACAACTTGACGACTCCATTGCTGCAATTATCGCCAAGGCCTATGGCGACGTGCAGGAATGGGTGCGTGTGGCAGTCACCAATGTGCGCACGTGTGAGAGCTCATTCCCGACGAAGCCGTCTGTGCTGACACCAAGGAACGAGGAGTTTATTAAGCTATGTGACATTGCACTATCCATCACCAAGATTGCAGAAACCAATTAACTATATAAATTTATAGTTTTTTTTTTCTACCTTTTTCATGGAAGATTGGAGCAAAATGGCTGGTTTTGGCTATTCTTTATATGGTGAAGCTTTTTCATTATGTGTTTCTTTTTTCTGTTTGAGATATAGTTCCTCTGTTTAGGATGAGGAGTTGCTAATTGGTGTATTATTATTGTTTCAATGGGGAGGGAGATAATGAAGTTGGACACAAACACAAAACTCTTTTTTAAAAGGTTTTGTGGATAATGGCCGTCTCTATTTTTTTTCATATATTTGAACTTTTGTCTAATTTTATATATTAAAATTGCATTTATATGCCATG ACCCCTACTCCCATCTCTCCCTCCAAAAAAAATTTGATAGTAATAATAAGAGGAGAAAAAAAGAAAAAAAAAACATTAGGCCATGAAATTTTTTTCAGCCATTTTGTTGGTCCTCTGCCTTTGCATGGCACCTCGGCGCCTGGACGCGGCCGGGGCTGCACAAGAGGAGGGACTAGGCATGATACAGAAAATGTGTGCACAAACTAACTACAAAGACCTTTGCATCACCTCCCTGACTTCTGACCCCAACAGCTTCCCTGCCGACAAGATGGGGCTAGCCTTGGTTGCCCTCCGCCTTGCCTCCTCCAATGCCTCCGACATATCGGAGAGCATCAAGGTGATGCTCAACGAAACGAGCCAAAATAATGAGCCTACAGTACAACAAGCTCTGTTTGATTGCCTTGATGAGTATCTAGAAGCATCTCAACAACTTGACGACTCCATTGCTGCAATTATCGCCAAGGCCTATGGCGACGTGCAGGAATGGGTGCGTGTGGCAGTCACCAATGTGCGCACGTGTGAGAGCTCATTCCCGACGAAGCCGTCTGTGCTGACACCAAGGAACGAGGAGTTTATTAAGCTATGTGACATTGCACTATCCATCACCAAGATTGCAGAAACCAATTAACTATATAAATTTATAGTTTTTTTTTTCTACCTTTTTCATGGAAGATTGGAGCAAAATGGCTGGTTTTGGCTATTCTTTATATGGTGAAGCTTTTTCATTATGTGTTTCTTTTTTCTGTTTGAGATATAGTTCCTCTGTTTAGGATGAGGAGTTGCTAATTGGTGTATTATTATTGTTTCAATGGGGAGGGAGATAATGAAGTTGGACACAAACACAAAACTCTTTTTTAAAAGGTTTTGTGGATAATGGCCGTCTCTATTTTTTTTCATATATTTGAACTTTTGTCTAATTTTATATATTAAAATTGCATTTATATGCCATG ATGAAATTTTTTTCAGCCATTTTGTTGGTCCTCTGCCTTTGCATGGCACCTCGGCGCCTGGACGCGGCCGGGGCTGCACAAGAGGAGGGACTAGGCATGATACAGAAAATGTGTGCACAAACTAACTACAAAGACCTTTGCATCACCTCCCTGACTTCTGACCCCAACAGCTTCCCTGCCGACAAGATGGGGCTAGCCTTGGTTGCCCTCCGCCTTGCCTCCTCCAATGCCTCCGACATATCGGAGAGCATCAAGGTGATGCTCAACGAAACGAGCCAAAATAATGAGCCTACAGTACAACAAGCTCTGTTTGATTGCCTTGATGAGTATCTAGAAGCATCTCAACAACTTGACGACTCCATTGCTGCAATTATCGCCAAGGCCTATGGCGACGTGCAGGAATGGGTGCGTGTGGCAGTCACCAATGTGCGCACGTGTGAGAGCTCATTCCCGACGAAGCCGTCTGTGCTGACACCAAGGAACGAGGAGTTTATTAAGCTATGTGACATTGCACTATCCATCACCAAGATTGCAGAAACCAATTAA MKFFSAILLVLCLCMAPRRLDAAGAAQEEGLGMIQKMCAQTNYKDLCITSLTSDPNSFPADKMGLALVALRLASSNASDISESIKVMLNETSQNNEPTVQQALFDCLDEYLEASQQLDDSIAAIIAKAYGDVQEWVRVAVTNVRTCESSFPTKPSVLTPRNEEFIKLCDIALSITKIAETN* Homology
BLAST of CSPI04G00970 vs. ExPASy Swiss-Prot
Match: Q0J8J8 (Pectinesterase inhibitor 28 OS=Oryza sativa subsp. japonica OX=39947 GN=PMEI28 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 6.1e-09 Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of CSPI04G00970 vs. ExPASy TrEMBL
Match: A0A0A0KY96 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001930 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 9.3e-93 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CSPI04G00970 vs. ExPASy TrEMBL
Match: A0A5D3E196 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001210 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.4e-71 Identity = 142/167 (85.03%), Postives = 154/167 (92.22%), Query Frame = 0
BLAST of CSPI04G00970 vs. ExPASy TrEMBL
Match: A0A6J1F7F2 (pectinesterase inhibitor-like OS=Cucurbita moschata OX=3662 GN=LOC111441544 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 5.3e-56 Identity = 118/180 (65.56%), Postives = 150/180 (83.33%), Query Frame = 0
BLAST of CSPI04G00970 vs. ExPASy TrEMBL
Match: A0A6J1J9E7 (pectinesterase inhibitor-like OS=Cucurbita maxima OX=3661 GN=LOC111482494 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 3.5e-55 Identity = 116/180 (64.44%), Postives = 150/180 (83.33%), Query Frame = 0
BLAST of CSPI04G00970 vs. ExPASy TrEMBL
Match: A0A6J1DPW6 (pectinesterase inhibitor-like OS=Momordica charantia OX=3673 GN=LOC111022446 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 4.0e-51 Identity = 114/178 (64.04%), Postives = 137/178 (76.97%), Query Frame = 0
BLAST of CSPI04G00970 vs. NCBI nr
Match: XP_004152360.2 (cell wall / vacuolar inhibitor of fructosidase 2 [Cucumis sativus] >KGN52826.1 hypothetical protein Csa_015223 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CSPI04G00970 vs. NCBI nr
Match: KAA0044390.1 (putative invertase inhibitor [Cucumis melo var. makuwa] >TYK29518.1 putative invertase inhibitor [Cucumis melo var. makuwa]) HSP 1 Score: 277.7 bits (709), Expect = 7.1e-71 Identity = 142/167 (85.03%), Postives = 154/167 (92.22%), Query Frame = 0
BLAST of CSPI04G00970 vs. NCBI nr
Match: XP_038906317.1 (cell wall / vacuolar inhibitor of fructosidase 2-like [Benincasa hispida]) HSP 1 Score: 261.9 bits (668), Expect = 4.0e-66 Identity = 135/180 (75.00%), Postives = 156/180 (86.67%), Query Frame = 0
BLAST of CSPI04G00970 vs. NCBI nr
Match: XP_022934353.1 (pectinesterase inhibitor-like [Cucurbita moschata]) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55 Identity = 118/180 (65.56%), Postives = 150/180 (83.33%), Query Frame = 0
BLAST of CSPI04G00970 vs. NCBI nr
Match: KAG6581280.1 (Pectinesterase inhibitor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018002.1 Pectinesterase inhibitor, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 225.7 bits (574), Expect = 3.2e-55 Identity = 118/180 (65.56%), Postives = 149/180 (82.78%), Query Frame = 0
BLAST of CSPI04G00970 vs. TAIR 10
Match: AT1G55770.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 98.2 bits (243), Expect = 7.2e-21 Identity = 56/151 (37.09%), Postives = 93/151 (61.59%), Query Frame = 0
BLAST of CSPI04G00970 vs. TAIR 10
Match: AT4G02250.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 89.4 bits (220), Expect = 3.3e-18 Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 0
BLAST of CSPI04G00970 vs. TAIR 10
Match: AT3G17152.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 4.2e-05 Identity = 37/149 (24.83%), Postives = 71/149 (47.65%), Query Frame = 0
BLAST of CSPI04G00970 vs. TAIR 10
Match: AT5G46930.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 4.2e-05 Identity = 34/121 (28.10%), Postives = 62/121 (51.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|