CSPI04G00830 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G00830
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	mitochondrial zinc maintenance protein 1, mitochondrial
Location	Chr4: 441767 .. 443467 (+)
RNA-Seq Expression	CSPI04G00830
Synteny	CSPI04G00830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGTTTTGGTATTTTATTGAAACGACGTCGTGACCTTTTGGGGAGCTTCATTGTTTGTGAGGAAGCGCTGAAGCCCATTTCAAGAGGGATCTCATCATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAGATCCTTTGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCTGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGCCTGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCATCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTTACTTCTCGCGGCGGCTATGGTATTCTACTTCGTTCTTTTACATTTTCGGATTCATTTTCGGTTTCTTTAACAACTAATCAAACAATTGACCAATCGAATATTGAATTTGAAATGAACGCATGGCAGTCTACATGTTTGATAAAATGCTTCACCCAAAATTTTCCGCTTTTTATTTACTGAAAGCTAGTGGGTTCGTAGAAAAACGCTGATGCTGATACTATTATGTACTCTTCTGGAGTTACTTGGTTTTTAATTTTACTGGGCCGGTGTTTATGAAGACTTAGATTAGGAATCGAGTTGTTTCAAAAAGAAAGAAAAAAGATAAGGAATTGAGAATGTGTGAACCGTGTTCGTATCGTAGAACAGATTATAGAAACACGAGTTTTTGTGATCTAGATTTTTGTTTACTTAACTTCGATAGCAGTGTTCCTTTTCCTTTCTTGAGTTCAATAAAGAGTGAAGATTCAAACATCACACCTCAGATTTTCAATGCCTTAACCTATAGATACATTCTCAAGTTGGAGTGTTGACAGCAAACTCACAAATTGGGATAAAACAAACCCGTATTTGAAACAGAAGTTTGAGTTCTTAACTTCGAATTATACAAACCCATCCAACAAATCAAATACCTTTCAAGGTTCTAACTTTAGAACTCAAGGACACCGTTATACAACCTATAGAACAGATGATGTTCAACCTTTTAAGGTTCTAATTTAACGTGCCAAACTTCCTAAAAAATTTCCTTCTCAATCCTTGTAAATAAAATCTGAGAGCCAAACATTAATTTTTGTTATCGCTGCAGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTACTGAAGAGCTTCTACGCAAATCTAAATGATGAGGTGAGATGATAGATGCTGACTTCCAATTTGACGATTGTTTTAACTTTCAGCTATTTGTTCTTGCCCTCGGAGGATCTTGGAAAATTTTTCTGTTTCCTTTTGTTGGTTCATTTCATATCCATATTTATTTGTTCTCAGTTAAATGTACTTGGTTGGTATGGTTCTTGCATTGGGATAATGAAAGTCCCAACGTTATACCTTTTATTCCAATTTGATGGATCGAGAAAGTTGGACTCAAAAGTCAAAATTTGGCTTGCAACTCTTTTCAGTGAATGAAATTTTCGAGAATGATTTTATCAAGAAGACTGGCTTTAGCAGTAAGAGAAACAATCATCCTCATTGAAAATCACTTTGGAGGAAAAGTGGACAATTTTTTCATAAAGTAGTGATCGGCAGGTAACTTTTGTGCTATGCTATGCCATGCCAACAAGGGAGACTTCTTAGAAAATTGAAACTCACATTTGATATATTTTCTTTTTAGTATAACAAGTACTAGGATGG

mRNA sequence

AAGAGTTTTGGTATTTTATTGAAACGACGTCGTGACCTTTTGGGGAGCTTCATTGTTTGTGAGGAAGCGCTGAAGCCCATTTCAAGAGGGATCTCATCATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAGATCCTTTGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCTGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGCCTGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCATCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTTACTTCTCGCGGCGGCTATGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTACTGAAGAGCTTCTACGCAAATCTAAATGATGAGGTGAGATGATAGATGCTGACTTCCAATTTGACGATTGTTTTAACTTTCAGCTATTTGTTCTTGCCCTCGGAGGATCTTGGAAAATTTTTCTGTTTCCTTTTGTTGGTTCATTTCATATCCATATTTATTTGTTCTCAGTTAAATGTACTTGGTTGGTATGGTTCTTGCATTGGGATAATGAAAGTCCCAACGTTATACCTTTTATTCCAATTTGATGGATCGAGAAAGTTGGACTCAAAAGTCAAAATTTGGCTTGCAACTCTTTTCAGTGAATGAAATTTTCGAGAATGATTTTATCAAGAAGACTGGCTTTAGCAGTAAGAGAAACAATCATCCTCATTGAAAATCACTTTGGAGGAAAAGTGGACAATTTTTTCATAAAGTAGTGATCGGCAGGTAACTTTTGTGCTATGCTATGCCATGCCAACAAGGGAGACTTCTTAGAAAATTGAAACTCACATTTGATATATTTTCTTTTTAGTATAACAAGTACTAGGATGG

Coding sequence (CDS)

ATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAGATCCTTTGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCTGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGCCTGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCATCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTTACTTCTCGCGGCGGCTATGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTACTGAAGAGCTTCTACGCAAATCTAAATGA

Protein sequence

MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK*

Homology

[Close]

BLAST of CSPI04G00830 vs. ExPASy Swiss-Prot
Match: Q5A7N3 (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MZM1 PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 5.9e-04
Identity = 24/75 (32.00%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 5  VLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREASHFI 64
          VLSAYR+ LRATK +F  D  +L  +  ++++  +++ ++ ++PEI + +++  E + F+
Sbjct: 4  VLSAYRNALRATKVAFRQDLPILQAARVQLKQGIRDNSNLQAQPEIEEAVQKLNEVAKFL 63

Query: 65 SNMIVQAKLTSRGGY 80
             IVQ +    G Y
Sbjct: 64 IQNIVQGEKQQDGKY 78

[Close]

BLAST of CSPI04G00830 vs. ExPASy Swiss-Prot
Match: C4Y4R9 (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Clavispora lusitaniae (strain ATCC 42720) OX=306902 GN=MZM1 PE=3 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 1.0e-03
Identity = 24/72 (33.33%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 1  MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
          M    L AYR+ LRAT+ +F GD  +L  + ++IR     +R +  + E+ K + E  E 
Sbjct: 1  MSNPALQAYRTALRATRVAFNGDNFVLKSARAKIREGLLSNRDLADKMEVEKKVAELNEV 60

Query: 61 SHFISNMIVQAK 73
          + F+   IVQ +
Sbjct: 61 AQFLVKNIVQGE 72

[Close]

BLAST of CSPI04G00830 vs. ExPASy TrEMBL
Match: A0A0A0KY80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.6e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 104

[Close]

BLAST of CSPI04G00830 vs. ExPASy TrEMBL
Match: A0A1S3BYH1 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494771 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.1e-45
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYRSLLRATK+SFAGDTLMLTESASEIRRKFQESRHVTSE EIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMKPSKDHAGATLEVP+EELLRKSK
Sbjct: 61  SHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKSK 104

[Close]

BLAST of CSPI04G00830 vs. ExPASy TrEMBL
Match: A0A6J1GAU2 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452487 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.1e-43
Identity = 93/104 (89.42%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           +KGEVLSAYR+LLRATK+SFAGDTLML ESA+E+RRKF+ESRHVTS+PEIRKLLEEAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMKPSK+HAGATLEVP+EELLR+SK
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELLRRSK 105

[Close]

BLAST of CSPI04G00830 vs. ExPASy TrEMBL
Match: A0A6J1DPV6 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022436 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.7e-43
Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           M+GEVLSAYR+LLRAT +SFAGDTLMLTESA+E+RRKF+ESRHVTSE EIRKLLEEAREA
Sbjct: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVP+EELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]

BLAST of CSPI04G00830 vs. ExPASy TrEMBL
Match: A0A6J1KH11 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493140 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42
Identity = 92/104 (88.46%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           +KGEVLSAYR+LLRATK+SFAGDTLML ESA+E+RRKF+ESRHVTS+PEIRKLLEEAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMK SK+HAGATLEVP+EELLR+SK
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKASKEHAGATLEVPSEELLRRSK 105

[Close]

BLAST of CSPI04G00830 vs. NCBI nr
Match: XP_004152250.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52811.1 hypothetical protein Csa_014848 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 5.4e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 104

[Close]

BLAST of CSPI04G00830 vs. NCBI nr
Match: XP_008454342.1 (PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYRSLLRATK+SFAGDTLMLTESASEIRRKFQESRHVTSE EIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMKPSKDHAGATLEVP+EELLRKSK
Sbjct: 61  SHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKSK 104

[Close]

BLAST of CSPI04G00830 vs. NCBI nr
Match: XP_038905396.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 187.2 bits (474), Expect = 7.3e-44
Identity = 97/103 (94.17%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYR+LLRATK+SFAGDTLMLTESASE+RRKF+ESRHVTSE EIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRALLRATKKSFAGDTLMLTESASEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVP+EELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]

BLAST of CSPI04G00830 vs. NCBI nr
Match: XP_022949021.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP_023524456.1 mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 93/104 (89.42%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           +KGEVLSAYR+LLRATK+SFAGDTLML ESA+E+RRKF+ESRHVTS+PEIRKLLEEAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMKPSK+HAGATLEVP+EELLR+SK
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELLRRSK 105

[Close]

BLAST of CSPI04G00830 vs. NCBI nr
Match: XP_022155304.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia])

HSP 1 Score: 182.6 bits (462), Expect = 1.8e-42
Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           M+GEVLSAYR+LLRAT +SFAGDTLMLTESA+E+RRKF+ESRHVTSE EIRKLLEEAREA
Sbjct: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVP+EELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]

BLAST of CSPI04G00830 vs. TAIR 10
Match: AT3G62810.1 (complex 1 family protein / LVR family protein )

HSP 1 Score: 137.9 bits (346), Expect = 4.7e-33
Identity = 72/100 (72.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 3   GEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREASH 62
           GE L AYR+LLRATK+SFAGDT ML  SASEIR+KF+E+R V S  +I +LLEEAREA+ 
Sbjct: 4   GEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREATQ 63

Query: 63  FISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRK 103
           FIS MIVQAKL  RGGYEMK S++HAGATLE+P+EE+LRK
Sbjct: 64  FISTMIVQAKLNERGGYEMKASQEHAGATLELPSEEMLRK 103

The following BLAST results are available for this feature:

BLAST of CSPI04G00830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5A7N3	5.9e-04	32.00	Mitochondrial zinc maintenance protein 1, mitochondrial OS=Candida albicans (str...	[more]
C4Y4R9	1.0e-03	33.33	Mitochondrial zinc maintenance protein 1, mitochondrial OS=Clavispora lusitaniae...	[more]

BLAST of CSPI04G00830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY80	2.6e-47	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1	[more]
A0A1S3BYH1	7.1e-45	96.15	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 ...	[more]
A0A6J1GAU2	5.1e-43	89.42	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX...	[more]
A0A6J1DPV6	8.7e-43	91.26	mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia O...	[more]
A0A6J1KH11	4.3e-42	88.46	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3...	[more]

BLAST of CSPI04G00830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152250.1	5.4e-47	100.00	mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52...	[more]
XP_008454342.1	1.5e-44	96.15	PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo...	[more]
XP_038905396.1	7.3e-44	94.17	mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida]	[more]
XP_022949021.1	1.1e-42	89.42	mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP...	[more]
XP_022155304.1	1.8e-42	91.26	mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia]	[more]

BLAST of CSPI04G00830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62810.1	4.7e-33	72.00	complex 1 family protein / LVR family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 4..60 e-value: 7.1E-13 score: 48.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..104
None	No IPR available	PANTHER	PTHR46749	COMPLEX III ASSEMBLY FACTOR LYRM7	coord: 2..102
None	No IPR available	PANTHER	PTHR46749:SF2	BNAA09G40160D PROTEIN	coord: 2..102
None	No IPR available	CDD	cd20267	Complex1_LYR_LYRM7	coord: 5..76 e-value: 2.65585E-25 score: 88.3895

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G00830.2	CSPI04G00830.2	mRNA
CSPI04G00830.1	CSPI04G00830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004386	helicase activity