CSPI03G47750 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G47750
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein CDI
Location	Chr3: 40679934 .. 40682021 (+)
RNA-Seq Expression	CSPI03G47750
Synteny	CSPI03G47750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCAGTGAACACGTGCTCCTTGCTGGCTGCCTATACGATCTCCCCTCGAATCCCCTGACTTCCATCGCAAGGAGCGTACCCGCTCATTCCTCTCACTCTCTTATCACCGTGTTCTTCTCTCTCGCACACAGTTTTAAACGCTCCCTCCCTACATTTCGTGGGCCAAGATTTCCCTCTCGCATCTACAAATATCAAAACTATTGACGAATCCTTTTGACTGTTTTCTTTTTCTTCATCATTTACATTTGCCTCCTGCTTGGTAAACTTTCTGTCTGGATTTCAATCAGATCTGATGCATTTTCCCTTCATTGTCTTTCATTTCTCCTGTTCCTCTTCTTGGACATTCCTTACGATTCGGATCCTTCTTGATTATCATATATCACGTTTCTGTTTGTTTTGATTCAGCTTTCGCAAATGTGTTTCTGTTCTTTCTGATTTCATTTTTTTTTATCACTACTGGGTCTTTTATTACTGCTTCTTTCATTGCCCTAATTAAATCTCTCTGTCCCTCTCTTTCGGTCTGCACGCTTGAGGAGGATAACCGTTTCTCTGGCGGATTTTGTTTTCTTCTTTAATTGTGCTGAGCAATGATATTAGACCTGCAGTCTTGTGTTGGAAACCTGCCGTGTCGTTTATTCAGAATTGATATTGATATTTTCATTTTCTGAACCGGAAATTCGGATTTTGTTTTCTTCTTTAAAATTTTTAAGTTCACTGTTGAATTTCTATAACCTTTATCATCTGGTATCTGAAATCTACTCGACTTGCTCTGATTTTAGCATTGAAGATTTAGTGCCCACCAAAGCCACTGATTCCAATGGGTTCTTCCAATGGAGAGAATCGTCCTGCTGTTGGAGATGAGCAACCATTTAGGATCTTTGTGGGCTATGATGTTCGTGAAGATCTTGCGTATCAGGTCTGTCGCCATTCCATCTTGAAGCGATCTTCAATCCCTGTTGAGATCATACCAATCAAGCAAGCAGATCTGAGAAAGAATGGTGTCTATTGGCGTGAGAGAGGACAAACTGAAAGCACAGAATTCTCGTTTTCACGGTTCTTAACTCCTTATTTGGCAAATTTTAAAGGATGGGCAATGTTTGTGGATTGTGATTTCCTGTATCTAGCTGATATTAAGGAACTGAGGGGCTTAATTGACAATAAGTTTGCAGTTATGTGTGTCCACCATGATTATACTCCAAAAGAAACTACAAAAATGGATGGTGCAGTTCAAACTGTTTACCCAAGGAAAAATTGGTCTTCAATGGTTTTGTACAATTGTGGGCATCCAAAGAACAAAGTGTTGACACCTGAGATTGTCAACACTCAAACTGGTGCATTTCTTCATAGATTTCAATGGCTTGAGGATAATGAAATTGGGTCAGTCCCATTTGTTTGGAACTTTCTTGAAGGCCATAACAAGAGTGTGGAAGGTGATTTAACCACTCTCCCTAAAGCAATTCATTACACTCGTGGTGGACCATGGTTTGAAGCTTGGAAGAATTGTGAATTTGCAGATCTCTGGCTGAAAGAAATGGAGGAGTATAATAAGGAGGCTGAGAAGAAATCTGAAGAATAGAAATCAAACATGAAAGTAAGTTCTCAAGGTTTAATTGTGGAACTGAATGTTTTTGGATATTTGCTTATAATTCTTTAGATTGGTTATGATTGGTTGAATGGTATATCAGATAGTATGGAGGCCTGGAAAAATGGTGGTTTGATGATTTGTAGTAGTATTGTTACTGGGATTGTAGGAACATCACGATCCTGTAGTACTATTTTACTGTTGTTCTAGATATGTGCTTACTAATTCAGGGGTGAATTTCCTAAACATTCGTAAAGTATTGGTTCGAATCTCCTCCCTTATTTTTTATTGTGTAATATTGTATAAGAAATCAAGAATCTGCTTTCCAATTTATCTTGTAATATTGTACAAGAAAAAAAATTATGTCCGGAATGTCAGGTTCTTAGCTTGTATGCCCAAAATTTAATGATTGAGAAGGTATTTGAGAAGGTATTTGTTTCTTTGTTTCATATTTCTATTTACAAGGATGAGGCAAATTATTGAATTATAGAAGATACAAAATTAG

mRNA sequence

GAGCAGTGAACACGTGCTCCTTGCTGGCTGCCTATACGATCTCCCCTCGAATCCCCTGACTTCCATCGCAAGGAGCGTACCCGCTCATTCCTCTCACTCTCTTATCACCGTGTTCTTCTCTCTCGCACACAGTTTTAAACGCTCCCTCCCTACATTTCGTGGGCCAAGATTTCCCTCTCGCATCTACAAATATCAAAACTATTGACGAATCCTTTTGACTGTTTTCTTTTTCTTCATCATTTACATTTGCCTCCTGCTTGCATTGAAGATTTAGTGCCCACCAAAGCCACTGATTCCAATGGGTTCTTCCAATGGAGAGAATCGTCCTGCTGTTGGAGATGAGCAACCATTTAGGATCTTTGTGGGCTATGATGTTCGTGAAGATCTTGCGTATCAGGTCTGTCGCCATTCCATCTTGAAGCGATCTTCAATCCCTGTTGAGATCATACCAATCAAGCAAGCAGATCTGAGAAAGAATGGTGTCTATTGGCGTGAGAGAGGACAAACTGAAAGCACAGAATTCTCGTTTTCACGGTTCTTAACTCCTTATTTGGCAAATTTTAAAGGATGGGCAATGTTTGTGGATTGTGATTTCCTGTATCTAGCTGATATTAAGGAACTGAGGGGCTTAATTGACAATAAGTTTGCAGTTATGTGTGTCCACCATGATTATACTCCAAAAGAAACTACAAAAATGGATGGTGCAGTTCAAACTGTTTACCCAAGGAAAAATTGGTCTTCAATGGTTTTGTACAATTGTGGGCATCCAAAGAACAAAGTGTTGACACCTGAGATTGTCAACACTCAAACTGGTGCATTTCTTCATAGATTTCAATGGCTTGAGGATAATGAAATTGGGTCAGTCCCATTTGTTTGGAACTTTCTTGAAGGCCATAACAAGAGTGTGGAAGGTGATTTAACCACTCTCCCTAAAGCAATTCATTACACTCGTGGTGGACCATGGTTTGAAGCTTGGAAGAATTGTGAATTTGCAGATCTCTGGCTGAAAGAAATGGAGGAGTATAATAAGGAGGCTGAGAAGAAATCTGAAGAATAGAAATCAAACATGAAAGTAAGTTCTCAAGGTTTAATTGTGGAACTGAATGTTTTTGGATATTTGCTTATAATTCTTTAGATTGGTTATGATTGGTTGAATGGTATATCAGATAGTATGGAGGCCTGGAAAAATGGTGGTTTGATGATTTGTAGTAGTATTGTTACTGGGATTGTAGGAACATCACGATCCTGTAGTACTATTTTACTGTTGTTCTAGATATGTGCTTACTAATTCAGGGGTGAATTTCCTAAACATTCGTAAAGTATTGGTTCGAATCTCCTCCCTTATTTTTTATTGTGTAATATTGTATAAGAAATCAAGAATCTGCTTTCCAATTTATCTTGTAATATTGTACAAGAAAAAAAATTATGTCCGGAATGTCAGGTTCTTAGCTTGTATGCCCAAAATTTAATGATTGAGAAGGTATTTGAGAAGGTATTTGTTTCTTTGTTTCATATTTCTATTTACAAGGATGAGGCAAATTATTGAATTATAGAAGATACAAAATTAG

Coding sequence (CDS)

ATGGGTTCTTCCAATGGAGAGAATCGTCCTGCTGTTGGAGATGAGCAACCATTTAGGATCTTTGTGGGCTATGATGTTCGTGAAGATCTTGCGTATCAGGTCTGTCGCCATTCCATCTTGAAGCGATCTTCAATCCCTGTTGAGATCATACCAATCAAGCAAGCAGATCTGAGAAAGAATGGTGTCTATTGGCGTGAGAGAGGACAAACTGAAAGCACAGAATTCTCGTTTTCACGGTTCTTAACTCCTTATTTGGCAAATTTTAAAGGATGGGCAATGTTTGTGGATTGTGATTTCCTGTATCTAGCTGATATTAAGGAACTGAGGGGCTTAATTGACAATAAGTTTGCAGTTATGTGTGTCCACCATGATTATACTCCAAAAGAAACTACAAAAATGGATGGTGCAGTTCAAACTGTTTACCCAAGGAAAAATTGGTCTTCAATGGTTTTGTACAATTGTGGGCATCCAAAGAACAAAGTGTTGACACCTGAGATTGTCAACACTCAAACTGGTGCATTTCTTCATAGATTTCAATGGCTTGAGGATAATGAAATTGGGTCAGTCCCATTTGTTTGGAACTTTCTTGAAGGCCATAACAAGAGTGTGGAAGGTGATTTAACCACTCTCCCTAAAGCAATTCATTACACTCGTGGTGGACCATGGTTTGAAGCTTGGAAGAATTGTGAATTTGCAGATCTCTGGCTGAAAGAAATGGAGGAGTATAATAAGGAGGCTGAGAAGAAATCTGAAGAATAG

Protein sequence

MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKNGVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVMCVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQWLEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEMEEYNKEAEKKSEE*

Homology

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BLAST of CSPI03G47750 vs. ExPASy Swiss-Prot
Match: Q9XIP8 (Protein CDI OS=Arabidopsis thaliana OX=3702 GN=CDI PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 5.2e-123
Identity = 197/238 (82.77%), Postives = 220/238 (92.44%), Query Frame = 0


Query: 14  DEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKNGVYWRERGQTEST 73
           +++PFRIFVGYD REDLAYQVC HSI KRSSIPVEI PI Q+DLRK G+YWRERGQ EST
Sbjct: 19  EKKPFRIFVGYDPREDLAYQVCHHSITKRSSIPVEITPIIQSDLRKKGLYWRERGQLEST 78

Query: 74  EFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVMCVHHDYTPKETTKM 133
           EFSFSRFLTP+L++++GWAMFVDCDFLYLADIKEL  LID+K+A+MCV HDYTPKETTKM
Sbjct: 79  EFSFSRFLTPHLSDYQGWAMFVDCDFLYLADIKELTDLIDDKYAIMCVQHDYTPKETTKM 138

Query: 134 DGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQWLEDNEIGSVPFVW 193
           DGAVQTVYPRKNWSSMVLYNCGHPKNK L+PEIVNTQTGAFLHRFQWLED EIGS+PFVW
Sbjct: 139 DGAVQTVYPRKNWSSMVLYNCGHPKNKTLSPEIVNTQTGAFLHRFQWLEDEEIGSIPFVW 198

Query: 194 NFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEMEEYNKEAEKKSE 252
           NFLEGHN+ VE D TT PKA+HYTRGGPWF+AWK+CEFADLWL EMEEYNKE +K+++
Sbjct: 199 NFLEGHNRVVEKDPTTQPKAVHYTRGGPWFDAWKDCEFADLWLNEMEEYNKENKKEAD 256

[Close]

BLAST of CSPI03G47750 vs. ExPASy TrEMBL
Match: A0A0A0LKJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915190 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 8.8e-150
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN 60
           MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN
Sbjct: 1   MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN 60

Query: 61  GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVMC 120
           GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELR LIDNKFAVMC
Sbjct: 61  GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRDLIDNKFAVMC 120

Query: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180
           VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW
Sbjct: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180

Query: 181 LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME 240
           LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME
Sbjct: 181 LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME 240

Query: 241 EYNKEAEKKSEE 253
           EYNKEAEKKSEE
Sbjct: 241 EYNKEAEKKSEE 252

[Close]

BLAST of CSPI03G47750 vs. ExPASy TrEMBL
Match: A0A5D3BW54 (Protein CDI OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6571G00050 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 5.5e-144
Identity = 242/252 (96.03%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN 60
           MGSSNGEN PAVGDEQPFRIFVGYDVREDLA++VCRHSILKRSSIPVEIIPIKQADLRKN
Sbjct: 1   MGSSNGENHPAVGDEQPFRIFVGYDVREDLAFEVCRHSILKRSSIPVEIIPIKQADLRKN 60

Query: 61  GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVMC 120
           GVYWRERGQTESTEFSFSRFLTPYLAN+KGWAMFVDCDFLYLADIKELR LIDNKFAVMC
Sbjct: 61  GVYWRERGQTESTEFSFSRFLTPYLANYKGWAMFVDCDFLYLADIKELRDLIDNKFAVMC 120

Query: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180
           VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW
Sbjct: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180

Query: 181 LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME 240
           LEDNEIGSVPFVWNFLEGHNK VEGDLTTLPKAIHYTRGGPWFEAWKNCEF DLW+KEME
Sbjct: 181 LEDNEIGSVPFVWNFLEGHNKIVEGDLTTLPKAIHYTRGGPWFEAWKNCEFGDLWVKEME 240

Query: 241 EYNKEAEKKSEE 253
           EY K+AEKKSEE
Sbjct: 241 EY-KKAEKKSEE 251

[Close]

BLAST of CSPI03G47750 vs. ExPASy TrEMBL
Match: A0A1S3CPV2 (protein CDI OS=Cucumis melo OX=3656 GN=LOC103503445 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 5.5e-144
Identity = 242/252 (96.03%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN 60
           MGSSNGEN PAVGDEQPFRIFVGYDVREDLA++VCRHSILKRSSIPVEIIPIKQADLRKN
Sbjct: 1   MGSSNGENHPAVGDEQPFRIFVGYDVREDLAFEVCRHSILKRSSIPVEIIPIKQADLRKN 60

Query: 61  GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVMC 120
           GVYWRERGQTESTEFSFSRFLTPYLAN+KGWAMFVDCDFLYLADIKELR LIDNKFAVMC
Sbjct: 61  GVYWRERGQTESTEFSFSRFLTPYLANYKGWAMFVDCDFLYLADIKELRDLIDNKFAVMC 120

Query: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180
           VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW
Sbjct: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180

Query: 181 LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME 240
           LEDNEIGSVPFVWNFLEGHNK VEGDLTTLPKAIHYTRGGPWFEAWKNCEF DLW+KEME
Sbjct: 181 LEDNEIGSVPFVWNFLEGHNKIVEGDLTTLPKAIHYTRGGPWFEAWKNCEFGDLWVKEME 240

Query: 241 EYNKEAEKKSEE 253
           EY K+AEKKSEE
Sbjct: 241 EY-KKAEKKSEE 251

[Close]

BLAST of CSPI03G47750 vs. ExPASy TrEMBL
Match: A0A6J1EY80 (protein CDI-like OS=Cucurbita moschata OX=3662 GN=LOC111439568 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.4e-139
Identity = 235/253 (92.89%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MGSSNGENRPAVGD-EQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRK 60
           MGS N EN PAVG+ EQPF+IFVGYDVREDLAY+VCRHSILKRSSIPVEIIPIKQADLR 
Sbjct: 1   MGSCNEENLPAVGEVEQPFKIFVGYDVREDLAYEVCRHSILKRSSIPVEIIPIKQADLRT 60

Query: 61  NGVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVM 120
           NGVYWRERGQ ESTEFSFSRFLTPYLAN++GWAMFVDCDFLYLADIKELR LIDNKFAVM
Sbjct: 61  NGVYWRERGQLESTEFSFSRFLTPYLANYEGWAMFVDCDFLYLADIKELRDLIDNKFAVM 120

Query: 121 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQ 180
           CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNK+LTPE VNTQTGAFLHRFQ
Sbjct: 121 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKLLTPETVNTQTGAFLHRFQ 180

Query: 181 WLEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240
           WLED+EIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM
Sbjct: 181 WLEDDEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240

Query: 241 EEYNKEAEKKSEE 253
           EEY KEA KKS E
Sbjct: 241 EEYQKEAVKKSAE 253

[Close]

BLAST of CSPI03G47750 vs. ExPASy TrEMBL
Match: A0A6J1H454 (protein CDI-like OS=Cucurbita moschata OX=3662 GN=LOC111459824 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.0e-138
Identity = 233/253 (92.09%), Postives = 241/253 (95.26%), Query Frame = 0


Query: 1   MGSSNGENRPAV-GDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRK 60
           MGS NGE   AV G EQPFRIFVGYDV EDLAY+VCRHSILKRSSIPVEIIPIKQADLRK
Sbjct: 1   MGSCNGETHSAVEGLEQPFRIFVGYDVSEDLAYEVCRHSILKRSSIPVEIIPIKQADLRK 60

Query: 61  NGVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVM 120
           NGVYWRERGQ ESTEFSFSRFLTPYLAN+KGWAMFVDCDFLYLADIKELR LIDNK+A+M
Sbjct: 61  NGVYWRERGQLESTEFSFSRFLTPYLANYKGWAMFVDCDFLYLADIKELRDLIDNKYAIM 120

Query: 121 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQ 180
           CVHHDY PKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPE VNTQTGAFLHRFQ
Sbjct: 121 CVHHDYAPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEAVNTQTGAFLHRFQ 180

Query: 181 WLEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240
           WLED+EIGS+PFVWNFLEGHNKSVEGDL+TLPKAIHYTRGGPWFEAWKNCEFADLWLKEM
Sbjct: 181 WLEDDEIGSIPFVWNFLEGHNKSVEGDLSTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240

Query: 241 EEYNKEAEKKSEE 253
           EEY KEA+KKSEE
Sbjct: 241 EEYQKEAKKKSEE 253

[Close]

BLAST of CSPI03G47750 vs. NCBI nr
Match: XP_004148344.1 (protein CDI [Cucumis sativus])

HSP 1 Score: 539.3 bits (1388), Expect = 1.8e-149
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN 60
           MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN
Sbjct: 1   MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN 60

Query: 61  GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVMC 120
           GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELR LIDNKFAVMC
Sbjct: 61  GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRDLIDNKFAVMC 120

Query: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180
           VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW
Sbjct: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180

Query: 181 LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME 240
           LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME
Sbjct: 181 LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME 240

Query: 241 EYNKEAEKKSEE 253
           EYNKEAEKKSEE
Sbjct: 241 EYNKEAEKKSEE 252

[Close]

BLAST of CSPI03G47750 vs. NCBI nr
Match: XP_008465853.1 (PREDICTED: protein CDI [Cucumis melo] >KAA0038481.1 protein CDI [Cucumis melo var. makuwa] >TYK03330.1 protein CDI [Cucumis melo var. makuwa])

HSP 1 Score: 520.0 bits (1338), Expect = 1.1e-143
Identity = 242/252 (96.03%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MGSSNGENRPAVGDEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKN 60
           MGSSNGEN PAVGDEQPFRIFVGYDVREDLA++VCRHSILKRSSIPVEIIPIKQADLRKN
Sbjct: 1   MGSSNGENHPAVGDEQPFRIFVGYDVREDLAFEVCRHSILKRSSIPVEIIPIKQADLRKN 60

Query: 61  GVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVMC 120
           GVYWRERGQTESTEFSFSRFLTPYLAN+KGWAMFVDCDFLYLADIKELR LIDNKFAVMC
Sbjct: 61  GVYWRERGQTESTEFSFSRFLTPYLANYKGWAMFVDCDFLYLADIKELRDLIDNKFAVMC 120

Query: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180
           VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW
Sbjct: 121 VHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQW 180

Query: 181 LEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEME 240
           LEDNEIGSVPFVWNFLEGHNK VEGDLTTLPKAIHYTRGGPWFEAWKNCEF DLW+KEME
Sbjct: 181 LEDNEIGSVPFVWNFLEGHNKIVEGDLTTLPKAIHYTRGGPWFEAWKNCEFGDLWVKEME 240

Query: 241 EYNKEAEKKSEE 253
           EY K+AEKKSEE
Sbjct: 241 EY-KKAEKKSEE 251

[Close]

BLAST of CSPI03G47750 vs. NCBI nr
Match: XP_038886869.1 (protein CDI [Benincasa hispida] >XP_038886870.1 protein CDI [Benincasa hispida])

HSP 1 Score: 510.4 bits (1313), Expect = 9.0e-141
Identity = 240/253 (94.86%), Postives = 247/253 (97.63%), Query Frame = 0


Query: 1   MGSSNGENRPAVGD-EQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRK 60
           MGS NGEN PAVGD EQPFRIFVGYDVREDLAY+VCR+SI+KRSSIPVEIIPIKQADLRK
Sbjct: 1   MGSCNGENHPAVGDVEQPFRIFVGYDVREDLAYEVCRYSIMKRSSIPVEIIPIKQADLRK 60

Query: 61  NGVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVM 120
           +GVYWRERGQ ESTEFSFSRFLTPYLAN+KGWAMFVDCDFLYLADIKELR LIDNKFAVM
Sbjct: 61  DGVYWRERGQFESTEFSFSRFLTPYLANYKGWAMFVDCDFLYLADIKELRDLIDNKFAVM 120

Query: 121 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQ 180
           CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQ
Sbjct: 121 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQ 180

Query: 181 WLEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240
           WLED+EIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM
Sbjct: 181 WLEDDEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240

Query: 241 EEYNKEAEKKSEE 253
           EEY KEA+KKSEE
Sbjct: 241 EEY-KEAKKKSEE 252

[Close]

BLAST of CSPI03G47750 vs. NCBI nr
Match: KAG7011466.1 (Protein CDI, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503.4 bits (1295), Expect = 1.1e-138
Identity = 235/253 (92.89%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MGSSNGENRPAVGD-EQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRK 60
           MGS N EN PAVG+ EQPF+IFVGYDVREDLAY+VCRHSILKRSSIPVEIIPIKQADLR 
Sbjct: 66  MGSCNEENLPAVGEVEQPFKIFVGYDVREDLAYEVCRHSILKRSSIPVEIIPIKQADLRT 125

Query: 61  NGVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVM 120
           NGVYWRERGQ ESTEFSFSRFLTPYLAN++GWAMFVDCDFLYLADIKELR LIDNKFAVM
Sbjct: 126 NGVYWRERGQLESTEFSFSRFLTPYLANYEGWAMFVDCDFLYLADIKELRDLIDNKFAVM 185

Query: 121 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQ 180
           CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNK+LTPE VNTQTGAFLHRFQ
Sbjct: 186 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKLLTPETVNTQTGAFLHRFQ 245

Query: 181 WLEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240
           WLED+EIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM
Sbjct: 246 WLEDDEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 305

Query: 241 EEYNKEAEKKSEE 253
           EEY KEA KKS E
Sbjct: 306 EEYQKEAVKKSAE 318

[Close]

BLAST of CSPI03G47750 vs. NCBI nr
Match: XP_022932955.1 (protein CDI-like [Cucurbita moschata] >XP_022932956.1 protein CDI-like [Cucurbita moschata] >XP_022932957.1 protein CDI-like [Cucurbita moschata])

HSP 1 Score: 503.4 bits (1295), Expect = 1.1e-138
Identity = 235/253 (92.89%), Postives = 242/253 (95.65%), Query Frame = 0


Query: 1   MGSSNGENRPAVGD-EQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRK 60
           MGS N EN PAVG+ EQPF+IFVGYDVREDLAY+VCRHSILKRSSIPVEIIPIKQADLR 
Sbjct: 1   MGSCNEENLPAVGEVEQPFKIFVGYDVREDLAYEVCRHSILKRSSIPVEIIPIKQADLRT 60

Query: 61  NGVYWRERGQTESTEFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVM 120
           NGVYWRERGQ ESTEFSFSRFLTPYLAN++GWAMFVDCDFLYLADIKELR LIDNKFAVM
Sbjct: 61  NGVYWRERGQLESTEFSFSRFLTPYLANYEGWAMFVDCDFLYLADIKELRDLIDNKFAVM 120

Query: 121 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQ 180
           CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNK+LTPE VNTQTGAFLHRFQ
Sbjct: 121 CVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKLLTPETVNTQTGAFLHRFQ 180

Query: 181 WLEDNEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240
           WLED+EIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM
Sbjct: 181 WLEDDEIGSVPFVWNFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEM 240

Query: 241 EEYNKEAEKKSEE 253
           EEY KEA KKS E
Sbjct: 241 EEYQKEAVKKSAE 253

[Close]

BLAST of CSPI03G47750 vs. TAIR 10
Match: AT1G64980.1 (Nucleotide-diphospho-sugar transferases superfamily protein )

HSP 1 Score: 441.8 bits (1135), Expect = 3.7e-124
Identity = 197/238 (82.77%), Postives = 220/238 (92.44%), Query Frame = 0


Query: 14  DEQPFRIFVGYDVREDLAYQVCRHSILKRSSIPVEIIPIKQADLRKNGVYWRERGQTEST 73
           +++PFRIFVGYD REDLAYQVC HSI KRSSIPVEI PI Q+DLRK G+YWRERGQ EST
Sbjct: 19  EKKPFRIFVGYDPREDLAYQVCHHSITKRSSIPVEITPIIQSDLRKKGLYWRERGQLEST 78

Query: 74  EFSFSRFLTPYLANFKGWAMFVDCDFLYLADIKELRGLIDNKFAVMCVHHDYTPKETTKM 133
           EFSFSRFLTP+L++++GWAMFVDCDFLYLADIKEL  LID+K+A+MCV HDYTPKETTKM
Sbjct: 79  EFSFSRFLTPHLSDYQGWAMFVDCDFLYLADIKELTDLIDDKYAIMCVQHDYTPKETTKM 138

Query: 134 DGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEIVNTQTGAFLHRFQWLEDNEIGSVPFVW 193
           DGAVQTVYPRKNWSSMVLYNCGHPKNK L+PEIVNTQTGAFLHRFQWLED EIGS+PFVW
Sbjct: 139 DGAVQTVYPRKNWSSMVLYNCGHPKNKTLSPEIVNTQTGAFLHRFQWLEDEEIGSIPFVW 198

Query: 194 NFLEGHNKSVEGDLTTLPKAIHYTRGGPWFEAWKNCEFADLWLKEMEEYNKEAEKKSE 252
           NFLEGHN+ VE D TT PKA+HYTRGGPWF+AWK+CEFADLWL EMEEYNKE +K+++
Sbjct: 199 NFLEGHNRVVEKDPTTQPKAVHYTRGGPWFDAWKDCEFADLWLNEMEEYNKENKKEAD 256

The following BLAST results are available for this feature:

BLAST of CSPI03G47750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIP8	5.2e-123	82.77	Protein CDI OS=Arabidopsis thaliana OX=3702 GN=CDI PE=2 SV=1	[more]

BLAST of CSPI03G47750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKJ4	8.8e-150	99.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915190 PE=4 SV=1	[more]
A0A5D3BW54	5.5e-144	96.03	Protein CDI OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6571G00050 P...	[more]
A0A1S3CPV2	5.5e-144	96.03	protein CDI OS=Cucumis melo OX=3656 GN=LOC103503445 PE=4 SV=1	[more]
A0A6J1EY80	5.4e-139	92.89	protein CDI-like OS=Cucurbita moschata OX=3662 GN=LOC111439568 PE=4 SV=1	[more]
A0A6J1H454	2.0e-138	92.09	protein CDI-like OS=Cucurbita moschata OX=3662 GN=LOC111459824 PE=4 SV=1	[more]

BLAST of CSPI03G47750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148344.1	1.8e-149	99.60	protein CDI [Cucumis sativus]	[more]
XP_008465853.1	1.1e-143	96.03	PREDICTED: protein CDI [Cucumis melo] >KAA0038481.1 protein CDI [Cucumis melo va...	[more]
XP_038886869.1	9.0e-141	94.86	protein CDI [Benincasa hispida] >XP_038886870.1 protein CDI [Benincasa hispida]	[more]
KAG7011466.1	1.1e-138	92.89	Protein CDI, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022932955.1	1.1e-138	92.89	protein CDI-like [Cucurbita moschata] >XP_022932956.1 protein CDI-like [Cucurbit...	[more]

BLAST of CSPI03G47750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64980.1	3.7e-124	82.77	Nucleotide-diphospho-sugar transferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 232..252
None	No IPR available	PANTHER	PTHR35105:SF5	SUBFAMILY NOT NAMED	coord: 13..251
None	No IPR available	PANTHER	PTHR35105	EXPRESSED PROTEIN	coord: 13..251
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	coord: 14..251 e-value: 4.1E-7 score: 31.4
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 20..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G47750.2	CSPI03G47750.2	mRNA
CSPI03G47750.1	CSPI03G47750.1	mRNA