CSPI03G47420 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G47420
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	IIIB transcription factor
Location	Chr3: 40471979 .. 40475234 (-)
RNA-Seq Expression	CSPI03G47420
Synteny	CSPI03G47420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAAATCTCTCACGAGAAGGGGGAAAACACACACAGCCTCTCCGCAGTACTTCGTTCTTTCCAAATTGATTAATGACTTCTTCTGGTATGTCACAGACCCATCTGCTGTTCTTGTGAAATTCACTTTCTTAGTGGGTTGTGAATTTCCTTAGCGTTATTCGATTCTACTTGACTTTGCAGGGAGATCAGCTTGAGGGATTTGGATGGACAAGCTTTTGCAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCTGGCTATGAAGAGCGGCGGATTCGATCGCTAAGGTTTGACCTTGATAAGCGTCTCAAACAGGTACTTTGGGGTTGGATCTTTTGCTTTTTGTTCTCATTATGCAGTTTTTGTCAATGGGTTTTAGTTTAGTTTCTACGCTTTGGGTTATTGCTCTATCGTGGTGGTTTTGGCTAAGGTTGGAGATGGTTATCATATACTGTGGATTCAATGAGGGAAGATGTAGATGTTTGTGCCGTTTTGTTCTGGGGAGTGGGAAATTTTACCTGTTTGAAGACTTTTTGATTTGAATGATTGGGTAACAGAGAGGAGTGAAATTTAGGTTGATATTTTTCAGTTGTGAAAACTTAGTCCACCGCTACTGACAGGAAAGTGTATCTTGATTTCATTATGTAGAGGTGGTGTTTCAAAGCTTCGGCCTTTAGGTCGAGAATATAATACCTAGAGTTCAGCTATGTTCCGGTTGACACGGGGGTGGAGATTTAAGTTCAGTTTCCTGTCTCAAGTTCCATTTTTGGGATTCAATTGCCCCTGATGAGAGTTCGTTGTGTGACCTATTTGTTATAGAATTTGAAATTTTGTACTTTTCTTGGAAAAGAAAACAAGGCTTTTGATTGATAAAACAAATAAAGAGACTAATTATCAGATTACATTGGAAGAAAGAAAGAAAAAACTAATATAACCAAATACAACCAACAATAGCATCTGAAAAGTGAGAGACAGCCTTTGGCATTTTGTACTGAGTTTAAAGTATGAGGATGTATATTTGTTGCTTCGATCAATGTTTTTCTCTGGTCACTTTCTTTGCCATTAGGTTAACTTATCCTGTCTTCTTGGTAAAGTCACGAATATGAATTTCTTTGTAAATGCAACTCATTACATTAGCCATTTAAAAATTAAATTAGTCCTACATTAGTAAGGAATGGTTTTGCACTTGACTTGACCTTTTCTTTTCTTCATCTCTCTCCCTCTTTTAGTTAATTGGAGAAATGGGTTTCAAGGGGTTATCTTTTGCATCGTTTGTTCAGAGCAGGAGACAAATTACTTATGGTAGGGTTTAGGGACAACTTAACACGTATGGTTTGGATAGAAAAAGTGAAATGGATTGACATGGGATTTTGGAATCTTCACAGAGCAATAGAGAAGCTCTGTTGTCCAGAATAAATAATCCGACTCATTGATTTTGTTAAATTCTTTCAAAGACGGCTGCTGAGTTATTCAAAATTTTATTTGATCAAAGTTTCGTTATCAATAATGTGGATTTTTAAGTTTTCATGTGTAAGACGCTATATTTATCGGTGTGTTTGTTAGCATTAAGTTGAAAAATGTGTGGATGATATACTTTGTTCTTTTTGTTTGAAAAATTTTAGGTTAGCACATGCCTTGCATTAGACCAAAAAAAGGAACTATTAAGTACTCATGATAGTGGATGTTCAAAATATTCAACGTGTTGCCAACATATTTTATATATTATAATGGTGTTTTACCCCTTGCCAGGCGGAGGAAAGAAAATCTGCCATAAGAAAGTTGCCAGAACAGACTATCTTAGGTGAAGTTCGTCGTATGGTTGAGGAGATGCAAAATCTAAATAAAAAGTTAGAGGAAACAGTAAGTTTTTATTCTTTCAGTTCTATTCCATAGATATTTCCGTTTTTCAATAAAAAAGAAAATGCCACTTTCTGCTACCCTAATATTCATTTTTTGTTATGTTGGATTACATATTGTAGATGTTTCTTTCCGATTTTCAACTTCACAAGAAGGATTATGCTTCTTGTTTTATAAGAATATACTAGAAAGATAGCAGTGCATTTGTGCACACACACATCTAATCATTAAATTGCTTCCAATATTTATAATCTATCACCGTCTCCCTTGCAAGGTTAATTTAAGAGTCGAGACTAAACTCTTGTTTTATTATGTCCAAACTTATTTGCGTCTTTGGCTTGGCATGTAACCTCATATTTCATTTCACCATTCCATTGGTATTGTTCTGTCAATTGGTTATCACCACTTATCGGTGATCAAGTAAGTTCTAGGAATTTATGCATAGACGAGAAATACAGATTGACAGATCTACCTTTGGTTTCTATGAGATATGGGGATTAATGTCTTCAAGTGCTCACTTAAGCTATTTATAGATTGTTTGGTGAATCATGCTACATGTTTAGTGTTTTGCGAGCATGAATGGTAATGCATCCAGGAGTCATGTGGGATAGAATTCGTCAATCCAAGAGGTGTCACATTGGTAAAGGAATGTATGTTAATGGGGTGAGAGAGATCGGTCCATCGAGAGGCGCTATCATCCTTCTTATTTTCTTTTTCTTTAGAAGAAGCTATATACAGCAGTAGTTCCTATGACAAAAACTTTCTACTATTTCAACTATAATGAATGAACGCCTGCTCACAACTCTACTTTGAGATTAAGAAAACTGAGAATATATGCAGGAAACTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTGATGAAAATACAACTTGAAGGAGAAGAGAGAAATATGAGGGACATGGTTAAAGTTATGCAGCAACAGGCTTTACTTGAAAAAGTTGAGGCAGGTAAGGTTACAAGTCGTAATCTTCAAACTGAAAAAAATCAACAAACTCAAAACCTTGCATCTGACACAACCCCTCAAAAAACTTAGCTGAGGTAATAATAGTTCTACGAGAAGTTAGTGATGATTTGATTAGATTAATAAGTCTGTTACTGTGCAATTTTGTTGCCACCATTTGTCTTAAAACTACACCTCTCAAGAGTTGTTGTGATTATAAAGCCCCTTAGATTTACTTACAGAGGCATTATTCATTACTTCTAGTTTATTATATGAATAGTTTTTCTTACCCAATTCAGATGTATGGATTTGTGATTGCCAACCTCAAGTTTGAAACTGAGTTTTGGCACTCCGACCGAAACCGGTTACCAATTACACCCTTGGTTAAATTGATCGAATAAGTTTCATTTTTCAA

mRNA sequence

AGTAAATCTCTCACGAGAAGGGGGAAAACACACACAGCCTCTCCGCAGTACTTCGTTCTTTCCAAATTGATTAATGACTTCTTCTGGGAGATCAGCTTGAGGGATTTGGATGGACAAGCTTTTGCAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCTGGCTATGAAGAGCGGCGGATTCGATCGCTAAGGTTTGACCTTGATAAGCGTCTCAAACAGGCGGAGGAAAGAAAATCTGCCATAAGAAAGTTGCCAGAACAGACTATCTTAGGTGAAGTTCGTCGTATGGTTGAGGAGATGCAAAATCTAAATAAAAAGTTAGAGGAAACAGAAACTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTGATGAAAATACAACTTGAAGGAGAAGAGAGAAATATGAGGGACATGGTTAAAGTTATGCAGCAACAGGCTTTACTTGAAAAAGTTGAGGCAGGTAAGGTTACAAGTCGTAATCTTCAAACTGAAAAAAATCAACAAACTCAAAACCTTGCATCTGACACAACCCCTCAAAAAACTTAGCTGAGGTAATAATAGTTCTACGAGAAGTTAGTGATGATTTGATTAGATTAATAAGTCTGTTACTGTGCAATTTTGTTGCCACCATTTGTCTTAAAACTACACCTCTCAAGAGTTGTTGTGATTATAAAGCCCCTTAGATTTACTTACAGAGGCATTATTCATTACTTCTAGTTTATTATATGAATAGTTTTTCTTACCCAATTCAGATGTATGGATTTGTGATTGCCAACCTCAAGTTTGAAACTGAGTTTTGGCACTCCGACCGAAACCGGTTACCAATTACACCCTTGGTTAAATTGATCGAATAAGTTTCATTTTTCAA

Coding sequence (CDS)

ATGGACAAGCTTTTGCAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCTGGCTATGAAGAGCGGCGGATTCGATCGCTAAGGTTTGACCTTGATAAGCGTCTCAAACAGGCGGAGGAAAGAAAATCTGCCATAAGAAAGTTGCCAGAACAGACTATCTTAGGTGAAGTTCGTCGTATGGTTGAGGAGATGCAAAATCTAAATAAAAAGTTAGAGGAAACAGAAACTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTGATGAAAATACAACTTGAAGGAGAAGAGAGAAATATGAGGGACATGGTTAAAGTTATGCAGCAACAGGCTTTACTTGAAAAAGTTGAGGCAGGTAAGGTTACAAGTCGTAATCTTCAAACTGAAAAAAATCAACAAACTCAAAACCTTGCATCTGACACAACCCCTCAAAAAACTTAG

Protein sequence

MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT*

Homology

[Close]

BLAST of CSPI03G47420 vs. ExPASy TrEMBL
Match: A0A0A0LKE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912930 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR
Sbjct: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE
Sbjct: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 153
           K EAGKVTSRNLQTEKNQQTQNLASDTTPQKT
Sbjct: 121 KAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 152

[Close]

BLAST of CSPI03G47420 vs. ExPASy TrEMBL
Match: A0A1S3CPZ1 (uncharacterized protein LOC103503473 OS=Cucumis melo OX=3656 GN=LOC103503473 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 132/152 (86.84%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDKLLQFGRRALFY+RVLSGYEERRIRS R  LDKRLKQAEERK+AIRK+PEQ ILGEVR
Sbjct: 1   MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQ LNK LEETE+AIEEYFKPIDKEAE LMKIQLEGEER+M+DMVKVMQQQAL +
Sbjct: 61  RMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLEGEERSMKDMVKVMQQQALFK 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 153
           + EAGKVT+  LQTEKNQQTQNLASDTTPQKT
Sbjct: 121 QAEAGKVTN-TLQTEKNQQTQNLASDTTPQKT 151

[Close]

BLAST of CSPI03G47420 vs. ExPASy TrEMBL
Match: A0A6J1BQI2 (uncharacterized protein LOC111004517 OS=Momordica charantia OX=3673 GN=LOC111004517 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.6e-59
Identity = 127/152 (83.55%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEE+K+A+RK+PEQ ILGEVR
Sbjct: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLEGEER M+DMVKVMQQQAL E
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLEGEERKMKDMVKVMQQQALFE 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 153
           K EAGKVT+  LQT+KNQ  QNLASD TPQKT
Sbjct: 121 KAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT 152

[Close]

BLAST of CSPI03G47420 vs. ExPASy TrEMBL
Match: A0A6J1K1F5 (uncharacterized protein LOC111491540 OS=Cucurbita maxima OX=3661 GN=LOC111491540 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50
Identity = 114/142 (80.28%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDK+L+ GRRALFYV+VLSGYEERRIRS R +L+KRLK+AEERK+AIRK+PEQ ILGEVR
Sbjct: 1   MDKVLELGRRALFYVKVLSGYEERRIRSFRLELEKRLKKAEERKAAIRKIPEQAILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKE ETLM++QLEGEER M++MVKVMQQQALLE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEVETLMRVQLEGEERTMKNMVKVMQQQALLE 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQN 143
           K EA KV S  LQT+KNQQ Q+
Sbjct: 121 KTEADKVGS-TLQTDKNQQNQD 141

[Close]

BLAST of CSPI03G47420 vs. ExPASy TrEMBL
Match: A0A6J1H1D7 (uncharacterized protein LOC111459545 OS=Cucurbita moschata OX=3662 GN=LOC111459545 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 6.3e-50
Identity = 113/142 (79.58%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDK+L+FGRRALFYV+VLSGYEERRIRSLR +L+KRLK+AEERK+AIR++PEQ ILGEVR
Sbjct: 1   MDKVLEFGRRALFYVKVLSGYEERRIRSLRLELEKRLKKAEERKAAIRQIPEQAILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKE E LM++QLEGEER M++MVKV+QQQALLE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEVEALMRVQLEGEERTMKNMVKVIQQQALLE 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQN 143
           K EA KV S  LQT+KNQQ Q+
Sbjct: 121 KTEADKVGS-TLQTDKNQQNQD 141

[Close]

BLAST of CSPI03G47420 vs. NCBI nr
Match: XP_004148363.1 (uncharacterized protein LOC101210706 [Cucumis sativus] >XP_031737645.1 uncharacterized protein LOC101210706 [Cucumis sativus] >KGN60461.1 hypothetical protein Csa_002633 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 3.0e-70
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR
Sbjct: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE
Sbjct: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 153
           K EAGKVTSRNLQTEKNQQTQNLASDTTPQKT
Sbjct: 121 KAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 152

[Close]

BLAST of CSPI03G47420 vs. NCBI nr
Match: XP_038886906.1 (uncharacterized protein LOC120077104 [Benincasa hispida] >XP_038886907.1 uncharacterized protein LOC120077104 [Benincasa hispida])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 134/152 (88.16%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEERK+AIRK+PEQ ILGEVR
Sbjct: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMKIQLEGEER M+DMVKVMQQQAL E
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLEGEERTMKDMVKVMQQQALFE 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 153
           K EAGKVTS  LQT+KNQQTQNLASDTTPQKT
Sbjct: 121 KAEAGKVTS-TLQTDKNQQTQNLASDTTPQKT 151

[Close]

BLAST of CSPI03G47420 vs. NCBI nr
Match: XP_008465889.1 (PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59
Identity = 132/152 (86.84%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDKLLQFGRRALFY+RVLSGYEERRIRS R  LDKRLKQAEERK+AIRK+PEQ ILGEVR
Sbjct: 1   MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQ LNK LEETE+AIEEYFKPIDKEAE LMKIQLEGEER+M+DMVKVMQQQAL +
Sbjct: 61  RMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLEGEERSMKDMVKVMQQQALFK 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 153
           + EAGKVT+  LQTEKNQQTQNLASDTTPQKT
Sbjct: 121 QAEAGKVTN-TLQTEKNQQTQNLASDTTPQKT 151

[Close]

BLAST of CSPI03G47420 vs. NCBI nr
Match: XP_022131261.1 (uncharacterized protein LOC111004517 [Momordica charantia] >XP_022131262.1 uncharacterized protein LOC111004517 [Momordica charantia])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 127/152 (83.55%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEE+K+A+RK+PEQ ILGEVR
Sbjct: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLEGEER M+DMVKVMQQQAL E
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLEGEERKMKDMVKVMQQQALFE 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 153
           K EAGKVT+  LQT+KNQ  QNLASD TPQKT
Sbjct: 121 KAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT 152

[Close]

BLAST of CSPI03G47420 vs. NCBI nr
Match: XP_022996261.1 (uncharacterized protein LOC111491540 [Cucurbita maxima] >XP_022996262.1 uncharacterized protein LOC111491540 [Cucurbita maxima])

HSP 1 Score: 208.0 bits (528), Expect = 5.8e-50
Identity = 114/142 (80.28%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           MDK+L+ GRRALFYV+VLSGYEERRIRS R +L+KRLK+AEERK+AIRK+PEQ ILGEVR
Sbjct: 1   MDKVLELGRRALFYVKVLSGYEERRIRSFRLELEKRLKKAEERKAAIRKIPEQAILGEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKE ETLM++QLEGEER M++MVKVMQQQALLE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEVETLMRVQLEGEERTMKNMVKVMQQQALLE 120

Query: 121 KVEAGKVTSRNLQTEKNQQTQN 143
           K EA KV S  LQT+KNQQ Q+
Sbjct: 121 KTEADKVGS-TLQTDKNQQNQD 141

[Close]

BLAST of CSPI03G47420 vs. TAIR 10
Match: AT4G17010.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36
Identity = 86/160 (53.75%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60
           M+KLL++GR+A+FYVRVLSGYEERRIRS R  L+KR++QA +RK  I +LPEQ +L EVR
Sbjct: 1   MNKLLEYGRKAMFYVRVLSGYEERRIRSYRLQLEKRIQQANQRKVEINRLPEQIVLSEVR 60

Query: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120
           RMVEEMQNLNK++E TE  IE+YFKPIDK A T+M+IQLEGE++ M  M+   QQ+A+ +
Sbjct: 61  RMVEEMQNLNKQIENTEAQIEDYFKPIDKHASTIMEIQLEGEKKTMGTMMNATQQEAIRK 120

Query: 121 KVEAGKVT----SRNLQTEKN-----QQTQNLASDTTPQK 152
             EA K+     + N+ T+ N     Q +++ A++ +  K
Sbjct: 121 IEEAEKLARARGNANVTTDANMGDKIQDSESSANEKSQAK 160

The following BLAST results are available for this feature:

BLAST of CSPI03G47420 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G47420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKE0	1.4e-70	99.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912930 PE=4 SV=1	[more]
A0A1S3CPZ1	1.1e-59	86.84	uncharacterized protein LOC103503473 OS=Cucumis melo OX=3656 GN=LOC103503473 PE=...	[more]
A0A6J1BQI2	9.6e-59	83.55	uncharacterized protein LOC111004517 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1K1F5	2.8e-50	80.28	uncharacterized protein LOC111491540 OS=Cucurbita maxima OX=3661 GN=LOC111491540...	[more]
A0A6J1H1D7	6.3e-50	79.58	uncharacterized protein LOC111459545 OS=Cucurbita moschata OX=3662 GN=LOC1114595...	[more]

BLAST of CSPI03G47420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148363.1	3.0e-70	99.34	uncharacterized protein LOC101210706 [Cucumis sativus] >XP_031737645.1 uncharact...	[more]
XP_038886906.1	1.6e-60	88.16	uncharacterized protein LOC120077104 [Benincasa hispida] >XP_038886907.1 unchara...	[more]
XP_008465889.1	2.4e-59	86.84	PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo]	[more]
XP_022131261.1	2.0e-58	83.55	uncharacterized protein LOC111004517 [Momordica charantia] >XP_022131262.1 uncha...	[more]
XP_022996261.1	5.8e-50	80.28	uncharacterized protein LOC111491540 [Cucurbita maxima] >XP_022996262.1 uncharac...	[more]

BLAST of CSPI03G47420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17010.1	1.3e-36	53.75	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..152
None	No IPR available	PANTHER	PTHR35749	OSJNBA0084A10.10 PROTEIN	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G47420.1	CSPI03G47420.1	mRNA