CSPI03G47100 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G47100
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Allyl alcohol dehydrogenase-like protein
Location	Chr3: 40165539 .. 40165838 (-)
RNA-Seq Expression	CSPI03G47100
Synteny	CSPI03G47100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCCTCTCGTGGTGGAAAGGCCAATCTCCGCCATCCGACTCCACTTCCAAGCCCCCGCAGCCTCCTCCCAAGAACCTCTCTCAGCCTGCCGAAGTCCCCGGTCTGAATGGCGCCCTCCAAGTCCCCCGACTAGATACCTCTGTCACCATCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACTCTCACCGGTTACTGCCCTGTCTCAGACGAATTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCAAGCGACTCCAATGCGCCTCTTTTTCGTGTCGTCTTCTGA

mRNA sequence

ATGGGTCTCCTCTCGTGGTGGAAAGGCCAATCTCCGCCATCCGACTCCACTTCCAAGCCCCCGCAGCCTCCTCCCAAGAACCTCTCTCAGCCTGCCGAAGTCCCCGGTCTGAATGGCGCCCTCCAAGTCCCCCGACTAGATACCTCTGTCACCATCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACTCTCACCGGTTACTGCCCTGTCTCAGACGAATTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCAAGCGACTCCAATGCGCCTCTTTTTCGTGTCGTCTTCTGA

Coding sequence (CDS)

ATGGGTCTCCTCTCGTGGTGGAAAGGCCAATCTCCGCCATCCGACTCCACTTCCAAGCCCCCGCAGCCTCCTCCCAAGAACCTCTCTCAGCCTGCCGAAGTCCCCGGTCTGAATGGCGCCCTCCAAGTCCCCCGACTAGATACCTCTGTCACCATCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACTCTCACCGGTTACTGCCCTGTCTCAGACGAATTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCAAGCGACTCCAATGCGCCTCTTTTTCGTGTCGTCTTCTGA

Protein sequence

MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSSSSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF*

Homology

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BLAST of CSPI03G47100 vs. ExPASy TrEMBL
Match: A0A0A0LF75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910650 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS
Sbjct: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF
Sbjct: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 99

[Close]

BLAST of CSPI03G47100 vs. ExPASy TrEMBL
Match: A0A5D3E692 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004090 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-43
Identity = 85/99 (85.86%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKGQSPPSDSTSKPPQPP KNLSQPAEVPGLNGAL+VPR   SVT+FEFGSV++
Sbjct: 1   MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSDKVTL GYCPVSD+FEPCRWEI+PAS S+APLFR+VF
Sbjct: 61  SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]

BLAST of CSPI03G47100 vs. ExPASy TrEMBL
Match: A0A1S3CQC7 (uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-43
Identity = 85/99 (85.86%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKGQSPPSDSTSKPPQPP KNLSQPAEVPGLNGAL+VPR   SVT+FEFGSV++
Sbjct: 1   MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSDKVTL GYCPVSD+FEPCRWEI+PAS S+APLFR+VF
Sbjct: 61  SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]

BLAST of CSPI03G47100 vs. ExPASy TrEMBL
Match: A0A6J1GLN4 (uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC111455443 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.1e-38
Identity = 80/99 (80.81%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKG S PS+S SK PQPPPKN+SQPAEVPGLNGA++VPR   +VT+FEFGSVS+
Sbjct: 1   MGLLSWWKGGSAPSESNSK-PQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSA 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSD VTLTGYCPVSD+ EPCRWEILPAS S+APLFRVVF
Sbjct: 61  SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CSPI03G47100 vs. ExPASy TrEMBL
Match: A0A6J1I4S4 (uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37
Identity = 79/99 (79.80%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKG S PS+S SK  QPPPKN+SQPAEVPGLNGA++VPR   +VT+FEFGSVS+
Sbjct: 1   MGLLSWWKGGSAPSESNSK-SQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSA 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSD VTLTGYCPVSD+ EPCRWEILPAS S+APLFRVVF
Sbjct: 61  SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CSPI03G47100 vs. NCBI nr
Match: XP_011652671.1 (uncharacterized protein LOC101203507 [Cucumis sativus] >KGN60428.1 hypothetical protein Csa_001035 [Cucumis sativus])

HSP 1 Score: 207.6 bits (527), Expect = 5.0e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS
Sbjct: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF
Sbjct: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 99

[Close]

BLAST of CSPI03G47100 vs. NCBI nr
Match: XP_008465928.1 (PREDICTED: uncharacterized protein LOC103503504 [Cucumis melo] >KAA0038533.1 uncharacterized protein E6C27_scaffold92G00590 [Cucumis melo var. makuwa] >TYK31130.1 uncharacterized protein E5676_scaffold455G004090 [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 5.9e-43
Identity = 85/99 (85.86%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKGQSPPSDSTSKPPQPP KNLSQPAEVPGLNGAL+VPR   SVT+FEFGSV++
Sbjct: 1   MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSDKVTL GYCPVSD+FEPCRWEI+PAS S+APLFR+VF
Sbjct: 61  SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]

BLAST of CSPI03G47100 vs. NCBI nr
Match: XP_038886991.1 (uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 uncharacterized protein LOC120077159 [Benincasa hispida])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKGQSPPSDS SKPP PP KN+SQPAEVPGLNGA++VPR   +VT+FEFGSVSS
Sbjct: 1   MGLLSWWKGQSPPSDSNSKPP-PPQKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSS 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSDKVTL GYCPVSD+ EPCRWEILPAS S+APLFRVVF
Sbjct: 61  SSDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CSPI03G47100 vs. NCBI nr
Match: XP_022952897.1 (uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothetical protein SDJN02_26421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167.9 bits (424), Expect = 4.4e-38
Identity = 80/99 (80.81%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKG S PS+S SK PQPPPKN+SQPAEVPGLNGA++VPR   +VT+FEFGSVS+
Sbjct: 1   MGLLSWWKGGSAPSESNSK-PQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSA 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSD VTLTGYCPVSD+ EPCRWEILPAS S+APLFRVVF
Sbjct: 61  SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CSPI03G47100 vs. NCBI nr
Match: XP_023554244.1 (uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 1.7e-37
Identity = 79/99 (79.80%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60
           MGLLSWWKG S PS+S SK PQPPPKN+SQP EVPGLNGA++VPR   +VT+FEFGSVS+
Sbjct: 1   MGLLSWWKGGSAPSESNSK-PQPPPKNVSQPPEVPGLNGAVEVPRPAATVTVFEFGSVSA 60

Query: 61  SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           SSD VTLTGYCPVSD+ EPCRWEILPAS S+APLFRVVF
Sbjct: 61  SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CSPI03G47100 vs. TAIR 10
Match: AT3G59840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 3.1e-26
Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1   MGLLSWWKGQSPPSDS-TSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVS 60
           MG+LSW+ G   PS S TSKP          PA  PG+NGA++VPR D + T+FEFGSV+
Sbjct: 1   MGILSWFTGSPKPSQSETSKPEMIQMPKSETPA--PGMNGAIEVPRPDRA-TVFEFGSVA 60

Query: 61  SSSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFRVVF 100
           ++ D+VTL GYCPVSD+ EPCRWEILPA   +AP FRVVF
Sbjct: 61  ATGDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFRVVF 97

The following BLAST results are available for this feature:

BLAST of CSPI03G47100 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G47100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF75	2.4e-50	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910650 PE=4 SV=1	[more]
A0A5D3E692	2.8e-43	85.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CQC7	2.8e-43	85.86	uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=...	[more]
A0A6J1GLN4	2.1e-38	80.81	uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC1114554...	[more]
A0A6J1I4S4	1.8e-37	79.80	uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658...	[more]

BLAST of CSPI03G47100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652671.1	5.0e-50	100.00	uncharacterized protein LOC101203507 [Cucumis sativus] >KGN60428.1 hypothetical ...	[more]
XP_008465928.1	5.9e-43	85.86	PREDICTED: uncharacterized protein LOC103503504 [Cucumis melo] >KAA0038533.1 unc...	[more]
XP_038886991.1	1.0e-39	83.84	uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 unchara...	[more]
XP_022952897.1	4.4e-38	80.81	uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothet...	[more]
XP_023554244.1	1.7e-37	79.80	uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI03G47100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59840.1	3.1e-26	59.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G47100.1	CSPI03G47100.1	mRNA