CSPI03G46560 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G46560
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	TPR_REGION domain-containing protein
Location	Chr3: 39778252 .. 39779590 (-)
RNA-Seq Expression	CSPI03G46560
Synteny	CSPI03G46560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACAATAACTCCGCCATTTCATAACCCTTCTCAACTTTTCAGCTATGAAGTCCGCTCTCCTCCGAACCGGCTCCGTTCCCCTCCTCTCTCCCACCACCACACCTTCCTCCTCCTTCTCCAACAACAAACAACCGTTGTATGGACTTTTCTCCTCCCACAACAGCTCCACTTCATCTCCCAGATCAATCTCTCTACATTATTGCACACGAAATCATTCTAATCATATCCGAAGAGCAGCATCTGAGAGCGACATCGTACGATCACTGCACCAGGTTTCCAATACGTCCGATCAATTTAGTGGACTCGCATCTCGGTCTCGATCTCGTTCTTCTTTTCCTTCCAAAATTCCAGAGGAGGAGTTTCTAAACGAGGATCATGATCAAATATTCGACGGTGATTCCATGGAGGAGGATAAAGTATTTCTCAATTCCCCAATCGGAATTAATGACCGTAGTAAGATCGGAGCGTATTACGAACATATGCTGAAATTAAATCCTAGCGACGCTTTATTACTAAGAAACTACGGAAAATTCCTACACGAGGTACGTAATCGAAAAAACTAGAAATGATCAAATAATTGAAACTCTGTTTGGATCTGAATAATCGTGAAACGTAATCGGATCTTAGATTTAAATATGTCGAAATTGATGGATGAAGGTAGCGAATGATTCAAAACGAGCGGAAGAATGTTACAGCAGAGCAATACTAGCAAGTCCAACAGACGGTGAATTACTGGCACTATACGGGAAATTAGTATGGGACACTCAAAGAGATAAACAAAGAGCTCAATATTACTTCGATCGCGCTGTTTATGCTTCTCCTAACGACTGGTAATTTTCCGAATCTCTGGATCTAGAAAAAAAAAAAAAACTTATCCCTAATCTTATAAACTGGATGGAAGGGTCTCTCGATCGTCTTCTGATTCAACAACAATAATAATGTATGAATTTGGTTTTGTGAAATAGTTTGGTGACAGGACATTACGCTCATTTCATGTGGGAAGTTGAAGAGGATGAGGCTGCTGCCTCGGCGGAGGATTCAGCGGCGGGTATGGTAAGGGCTTATTGATGGATGTTGAAGAAATTGGGTTTAGGAGAGAAAGAAGTAAGAAAGGGAGTGGGCATTTGATTATTTCAAGAGGGGAATTCTTTTCTCTATTTTAATTCTATACTTGAAAAGCTCTTTTACACATAGATATATTTTCATTTTTTCTTCTTTTGTTACGTTGTAAAAGTGTAAAAGTTATAAATTTTTTTGGGAAAGTTTAATATCGACGTTTACTTAACAATTCGATGCCTAATGTAAAAAGCAGTCCGAATAATAAAAATGGCTCACAT

mRNA sequence

CACACAATAACTCCGCCATTTCATAACCCTTCTCAACTTTTCAGCTATGAAGTCCGCTCTCCTCCGAACCGGCTCCGTTCCCCTCCTCTCTCCCACCACCACACCTTCCTCCTCCTTCTCCAACAACAAACAACCGTTGTATGGACTTTTCTCCTCCCACAACAGCTCCACTTCATCTCCCAGATCAATCTCTCTACATTATTGCACACGAAATCATTCTAATCATATCCGAAGAGCAGCATCTGAGAGCGACATCGTACGATCACTGCACCAGGTTTCCAATACGTCCGATCAATTTAGTGGACTCGCATCTCGGTCTCGATCTCGTTCTTCTTTTCCTTCCAAAATTCCAGAGGAGGAGTTTCTAAACGAGGATCATGATCAAATATTCGACGGTGATTCCATGGAGGAGGATAAAGTATTTCTCAATTCCCCAATCGGAATTAATGACCGTAGTAAGATCGGAGCGTATTACGAACATATGCTGAAATTAAATCCTAGCGACGCTTTATTACTAAGAAACTACGGAAAATTCCTACACGAGGTAGCGAATGATTCAAAACGAGCGGAAGAATGTTACAGCAGAGCAATACTAGCAAGTCCAACAGACGGTGAATTACTGGCACTATACGGGAAATTAGTATGGGACACTCAAAGAGATAAACAAAGAGCTCAATATTACTTCGATCGCGCTGTTTATGCTTCTCCTAACGACTGTTTGGTGACAGGACATTACGCTCATTTCATGTGGGAAGTTGAAGAGGATGAGGCTGCTGCCTCGGCGGAGGATTCAGCGGCGGGTATGGTAAGGGCTTATTGATGGATGTTGAAGAAATTGGGTTTAGGAGAGAAAGAAGTAAGAAAGGGAGTGGGCATTTGATTATTTCAAGAGGGGAATTCTTTTCTCTATTTTAATTCTATACTTGAAAAGCTCTTTTACACATAGATATATTTTCATTTTTTCTTCTTTTGTTACGTTGTAAAAGTGTAAAAGTTATAAATTTTTTTGGGAAAGTTTAATATCGACGTTTACTTAACAATTCGATGCCTAATGTAAAAAGCAGTCCGAATAATAAAAATGGCTCACAT

Coding sequence (CDS)

ATGAAGTCCGCTCTCCTCCGAACCGGCTCCGTTCCCCTCCTCTCTCCCACCACCACACCTTCCTCCTCCTTCTCCAACAACAAACAACCGTTGTATGGACTTTTCTCCTCCCACAACAGCTCCACTTCATCTCCCAGATCAATCTCTCTACATTATTGCACACGAAATCATTCTAATCATATCCGAAGAGCAGCATCTGAGAGCGACATCGTACGATCACTGCACCAGGTTTCCAATACGTCCGATCAATTTAGTGGACTCGCATCTCGGTCTCGATCTCGTTCTTCTTTTCCTTCCAAAATTCCAGAGGAGGAGTTTCTAAACGAGGATCATGATCAAATATTCGACGGTGATTCCATGGAGGAGGATAAAGTATTTCTCAATTCCCCAATCGGAATTAATGACCGTAGTAAGATCGGAGCGTATTACGAACATATGCTGAAATTAAATCCTAGCGACGCTTTATTACTAAGAAACTACGGAAAATTCCTACACGAGGTAGCGAATGATTCAAAACGAGCGGAAGAATGTTACAGCAGAGCAATACTAGCAAGTCCAACAGACGGTGAATTACTGGCACTATACGGGAAATTAGTATGGGACACTCAAAGAGATAAACAAAGAGCTCAATATTACTTCGATCGCGCTGTTTATGCTTCTCCTAACGACTGTTTGGTGACAGGACATTACGCTCATTTCATGTGGGAAGTTGAAGAGGATGAGGCTGCTGCCTCGGCGGAGGATTCAGCGGCGGGTATGGTAAGGGCTTATTGA

Protein sequence

MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNHIRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSMEEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSRAILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEEDEAAASAEDSAAGMVRAY*

Homology

[Close]

BLAST of CSPI03G46560 vs. ExPASy TrEMBL
Match: A0A0A0LH65 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G901150 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 8.4e-140
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60
           MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH
Sbjct: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60

Query: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120
           IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM
Sbjct: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120

Query: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180
           EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR
Sbjct: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180

Query: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240
           AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED
Sbjct: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240

Query: 241 EAAASAEDSAAGMVRAY 258
           EAAASAEDSAAGMVRAY
Sbjct: 241 EAAASAEDSAAGMVRAY 257

[Close]

BLAST of CSPI03G46560 vs. ExPASy TrEMBL
Match: A0A5D3E5U4 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004600 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 220/256 (85.94%), Postives = 232/256 (90.62%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60
           MKSALLRTGSVPLLSPTTT     SNNKQPLYG+ S HNSS SSPR ISLH CTRN+SN 
Sbjct: 1   MKSALLRTGSVPLLSPTTTA----SNNKQPLYGVLSCHNSSASSPR-ISLH-CTRNNSNR 60

Query: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120
           IRRAASESDIVRSLH+VSNTSDQFSGLASRS SR SFPSKIPEEEF++ED DQ FD DSM
Sbjct: 61  IRRAASESDIVRSLHEVSNTSDQFSGLASRSLSR-SFPSKIPEEEFIDED-DQ-FDSDSM 120

Query: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180
           EEDK +LN  +G+NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEV ND+KRAEECYSR
Sbjct: 121 EEDKEYLNYRVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVVNDTKRAEECYSR 180

Query: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240
           AILASPTDGELLALYGKLVWDT+RDKQRAQYYFDRAVYASPNDCLVTGHYAHFMW+VE+D
Sbjct: 181 AILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDD 240

Query: 241 EAAASAEDSAAGMVRA 257
           EAA  AEDS AGMV A
Sbjct: 241 EAAL-AEDSPAGMVTA 246

[Close]

BLAST of CSPI03G46560 vs. ExPASy TrEMBL
Match: A0A1S3CQ68 (uncharacterized protein LOC103503559 OS=Cucumis melo OX=3656 GN=LOC103503559 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 220/256 (85.94%), Postives = 232/256 (90.62%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60
           MKSALLRTGSVPLLSPTTT     SNNKQPLYG+ S HNSS SSPR ISLH CTRN+SN 
Sbjct: 1   MKSALLRTGSVPLLSPTTTA----SNNKQPLYGVLSCHNSSASSPR-ISLH-CTRNNSNR 60

Query: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120
           IRRAASESDIVRSLH+VSNTSDQFSGLASRS SR SFPSKIPEEEF++ED DQ FD DSM
Sbjct: 61  IRRAASESDIVRSLHEVSNTSDQFSGLASRSLSR-SFPSKIPEEEFIDED-DQ-FDSDSM 120

Query: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180
           EEDK +LN  +G+NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEV ND+KRAEECYSR
Sbjct: 121 EEDKEYLNYRVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVVNDTKRAEECYSR 180

Query: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240
           AILASPTDGELLALYGKLVWDT+RDKQRAQYYFDRAVYASPNDCLVTGHYAHFMW+VE+D
Sbjct: 181 AILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDD 240

Query: 241 EAAASAEDSAAGMVRA 257
           EAA  AEDS AGMV A
Sbjct: 241 EAAL-AEDSPAGMVTA 246

[Close]

BLAST of CSPI03G46560 vs. ExPASy TrEMBL
Match: A0A6J1EX26 (uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC111437316 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.2e-79
Identity = 172/276 (62.32%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRN---- 60
           MKSALLRT S+P++ P+ T SSSFSN + PL+G+F+ H SS SSP+ ISLH+   N    
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYR-PLHGVFTGHKSSVSSPK-ISLHFEMNNPRGR 60

Query: 61  HSNHIRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFD 120
           +S+ IRRA+SESDI RSLH+VSN  DQF G+ SRSR+RSS  S+IPEEEFLN+D    FD
Sbjct: 61  NSSGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSH-SEIPEEEFLNQDE---FD 120

Query: 121 GDSMEEDKVFLNSPIGI---------------NDRSKIGAYYEHMLKLNPSDALLLRNYG 180
            DSME+D   L+S IG                NDR+KIGAYYE +LKLNP+DALLLRNYG
Sbjct: 121 SDSMEDDSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYG 180

Query: 181 KFLHEVANDSKRAEECYSRAILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASP 240
           KFLHEV  D  R+EECYSRAILA+P+DGELLALYGKLVW++ +DKQRA+YYFDRAV ASP
Sbjct: 181 KFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASP 240

Query: 241 NDCLVTGHYAHFMWEVEEDEAAASAEDSAAGMVRAY 258
           NDCLV G+YA+F+W++E+DE   +AE   A MV A+
Sbjct: 241 NDCLVIGYYAYFLWQIEDDEEEEAAEVWPAAMVAAF 270

[Close]

BLAST of CSPI03G46560 vs. ExPASy TrEMBL
Match: A0A6J1K5B2 (uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 9.2e-78
Identity = 171/276 (61.96%), Postives = 207/276 (75.00%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRN---- 60
           MKSAL RT S+P++SP+ T SSSFSN + PL+G+F+ H SS SSP+ ISL +   N    
Sbjct: 1   MKSALFRTVSIPVISPSGTASSSFSNYR-PLHGVFTGHKSSVSSPK-ISLLFEMNNPRGR 60

Query: 61  HSNHIRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFD 120
           +S+ IRR +SESDI RSLH+VSN  DQF G+ SRSR+RSS  S+IPEEEFLN+D    FD
Sbjct: 61  NSSGIRRVSSESDISRSLHEVSNPYDQFGGVGSRSRTRSSH-SEIPEEEFLNQDE---FD 120

Query: 121 GDSMEEDKVFLNSPIGI---------------NDRSKIGAYYEHMLKLNPSDALLLRNYG 180
            DSMEED   L+S IG                NDR+KIGAYYE +LKLNP+DALLLRNYG
Sbjct: 121 SDSMEEDSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYG 180

Query: 181 KFLHEVANDSKRAEECYSRAILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASP 240
           KFLHEV  D  R+EECYSRAILA+P+DGELLALYGKLVW++ +DKQRA+YYFDRAV ASP
Sbjct: 181 KFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASP 240

Query: 241 NDCLVTGHYAHFMWEVEEDEAAASAEDSAAGMVRAY 258
           NDCLV G YA+F+W++E+DE   +AE   A MV A+
Sbjct: 241 NDCLVIGCYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270

[Close]

BLAST of CSPI03G46560 vs. NCBI nr
Match: XP_004136396.1 (uncharacterized protein LOC101218835 [Cucumis sativus] >KGN60369.1 hypothetical protein Csa_002556 [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 1.7e-139
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60
           MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH
Sbjct: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60

Query: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120
           IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM
Sbjct: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120

Query: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180
           EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR
Sbjct: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180

Query: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240
           AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED
Sbjct: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240

Query: 241 EAAASAEDSAAGMVRAY 258
           EAAASAEDSAAGMVRAY
Sbjct: 241 EAAASAEDSAAGMVRAY 257

[Close]

BLAST of CSPI03G46560 vs. NCBI nr
Match: XP_008465993.1 (PREDICTED: uncharacterized protein LOC103503559 [Cucumis melo] >KAA0038565.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa] >TYK31178.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 5.5e-109
Identity = 220/256 (85.94%), Postives = 232/256 (90.62%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60
           MKSALLRTGSVPLLSPTTT     SNNKQPLYG+ S HNSS SSPR ISLH CTRN+SN 
Sbjct: 1   MKSALLRTGSVPLLSPTTTA----SNNKQPLYGVLSCHNSSASSPR-ISLH-CTRNNSNR 60

Query: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120
           IRRAASESDIVRSLH+VSNTSDQFSGLASRS SR SFPSKIPEEEF++ED DQ FD DSM
Sbjct: 61  IRRAASESDIVRSLHEVSNTSDQFSGLASRSLSR-SFPSKIPEEEFIDED-DQ-FDSDSM 120

Query: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180
           EEDK +LN  +G+NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEV ND+KRAEECYSR
Sbjct: 121 EEDKEYLNYRVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVVNDTKRAEECYSR 180

Query: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240
           AILASPTDGELLALYGKLVWDT+RDKQRAQYYFDRAVYASPNDCLVTGHYAHFMW+VE+D
Sbjct: 181 AILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDD 240

Query: 241 EAAASAEDSAAGMVRA 257
           EAA  AEDS AGMV A
Sbjct: 241 EAAL-AEDSPAGMVTA 246

[Close]

BLAST of CSPI03G46560 vs. NCBI nr
Match: XP_038888361.1 (uncharacterized protein LOC120078207 [Benincasa hispida])

HSP 1 Score: 328.2 bits (840), Expect = 6.5e-86
Identity = 189/268 (70.52%), Postives = 214/268 (79.85%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRN---- 60
           MKSALLRTGSVP+LSP    S SFSNNK PLYG+FS + SS SSP+ ISLH+   +    
Sbjct: 1   MKSALLRTGSVPVLSPAAA-SFSFSNNK-PLYGVFSCYKSSVSSPK-ISLHFEINHRRGK 60

Query: 61  HSNHIRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRS-SFPSKIPEEEFLNEDHDQIF 120
           +S+ IRRAASESDI +SLH+V N  DQ SG+ SRSRSRS SFPS IPEEE LNED     
Sbjct: 61  NSSRIRRAASESDITQSLHEVLNPHDQSSGVRSRSRSRSRSFPSGIPEEELLNEDES--- 120

Query: 121 DGDSMEEDKVFLNSPI--GINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKR 180
           DGDSM++   F++     G NDRSKIGAYYE +LKLNPSDALLLRNYGKFLHEV  D+ R
Sbjct: 121 DGDSMKDGVDFVSDTFSNGSNDRSKIGAYYEELLKLNPSDALLLRNYGKFLHEVVKDTIR 180

Query: 181 AEECYSRAILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHF 240
           AEECYSRAILASPTDGELLALYGKLVWDTQRDK+RAQYYFDRAVYASP+DCLV GHYAHF
Sbjct: 181 AEECYSRAILASPTDGELLALYGKLVWDTQRDKRRAQYYFDRAVYASPSDCLVIGHYAHF 240

Query: 241 MWEVEEDEAAASAEDSA----AGMVRAY 258
           +W+VE+DEAAA+A  +A    A +V AY
Sbjct: 241 LWQVEDDEAAAAAAAAAEAPPAAVVSAY 262

[Close]

BLAST of CSPI03G46560 vs. NCBI nr
Match: XP_022930988.1 (uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothetical protein SDJN02_03004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.4 bits (781), Expect = 4.5e-79
Identity = 172/276 (62.32%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRN---- 60
           MKSALLRT S+P++ P+ T SSSFSN + PL+G+F+ H SS SSP+ ISLH+   N    
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYR-PLHGVFTGHKSSVSSPK-ISLHFEMNNPRGR 60

Query: 61  HSNHIRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFD 120
           +S+ IRRA+SESDI RSLH+VSN  DQF G+ SRSR+RSS  S+IPEEEFLN+D    FD
Sbjct: 61  NSSGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSH-SEIPEEEFLNQDE---FD 120

Query: 121 GDSMEEDKVFLNSPIGI---------------NDRSKIGAYYEHMLKLNPSDALLLRNYG 180
            DSME+D   L+S IG                NDR+KIGAYYE +LKLNP+DALLLRNYG
Sbjct: 121 SDSMEDDSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYG 180

Query: 181 KFLHEVANDSKRAEECYSRAILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASP 240
           KFLHEV  D  R+EECYSRAILA+P+DGELLALYGKLVW++ +DKQRA+YYFDRAV ASP
Sbjct: 181 KFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASP 240

Query: 241 NDCLVTGHYAHFMWEVEEDEAAASAEDSAAGMVRAY 258
           NDCLV G+YA+F+W++E+DE   +AE   A MV A+
Sbjct: 241 NDCLVIGYYAYFLWQIEDDEEEEAAEVWPAAMVAAF 270

[Close]

BLAST of CSPI03G46560 vs. NCBI nr
Match: XP_023532088.1 (uncharacterized protein LOC111794359 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.3 bits (778), Expect = 1.0e-78
Identity = 171/276 (61.96%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRN---- 60
           MKSALLRT S+P++ P+ T SSSFSN + PL+G+F+ H SS SSP+ ISLH+   N    
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYR-PLHGVFTGHKSSVSSPK-ISLHFEMNNPRGR 60

Query: 61  HSNHIRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFD 120
           +S+ IRRA+SESDI RSLH+VSN  DQF G+ SRSR+RSS  S+IPEEEFLN+D    FD
Sbjct: 61  NSSGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSH-SEIPEEEFLNQDE---FD 120

Query: 121 GDSMEEDKVFLNSPIGI---------------NDRSKIGAYYEHMLKLNPSDALLLRNYG 180
            DSME+D   L++ IG                NDR+KIGAYYE +LKLNP+DALLLRNYG
Sbjct: 121 SDSMEDDSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYG 180

Query: 181 KFLHEVANDSKRAEECYSRAILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASP 240
           KFLHEV  D  R+EECYSRAILA+P+DGELLALYGKLVW++ +DKQRA+YYFDRAV ASP
Sbjct: 181 KFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASP 240

Query: 241 NDCLVTGHYAHFMWEVEEDEAAASAEDSAAGMVRAY 258
           NDCLV G+YA+F+W++E+DE   +AE   A MV A+
Sbjct: 241 NDCLVIGYYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270

[Close]

BLAST of CSPI03G46560 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 4.4e-40
Identity = 108/277 (38.99%), Postives = 150/277 (54.15%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSN- 60
           MKS L+RTGS+P+L        S S    P+    S  + S+   R           +N 
Sbjct: 1   MKSLLMRTGSMPVLQNRLISGGS-SRKMTPISRTNSVESLSSYGERFAGGKISIEVKANV 60

Query: 61  HIRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDG-D 120
            +RR  SESD++RS   +     + S            P++IPE++   E+  +  DG  
Sbjct: 61  GMRRVLSESDVIRSERMLKRVGSKPS------------PARIPEDDEAGEEEIRFADGWG 120

Query: 121 SM------EEDKVFLNSPI----------------GINDRSKIGAYYEHMLKLNPSDALL 180
           SM       E+K F    +                G  D+SKIG YY  ML+ NP+++LL
Sbjct: 121 SMISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGDYYREMLRSNPNNSLL 180

Query: 181 LRNYGKFLHEVANDSKRAEECYSRAILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRA 240
           L NYGKFL+EV  D++ AEE Y RAIL +P DGE L++YG+L+W+T+RD++RAQ YFD+A
Sbjct: 181 LMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEKRAQGYFDQA 240

Query: 241 VYASPNDCLVTGHYAHFMWEVEEDEAAASAEDSAAGM 254
           V ASPNDC+V G YA FMWE E+D+     E+    M
Sbjct: 241 VNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEEEWM 264

[Close]

BLAST of CSPI03G46560 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.6e-24
Identity = 51/103 (49.51%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 139 IGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSRAILA-SPTDGELLALYGK 198
           +  YYE M++  P D LLL NY +FL EV  D ++AEE   RA+L+ S  DGELL++YG 
Sbjct: 110 VDGYYEEMIQRYPGDTLLLSNYARFLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGD 169

Query: 199 LVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 241
           L+W    D  RAQ Y+D+AV +SP+DC V   YA F+W+ EE+
Sbjct: 170 LIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASYARFLWDAEEE 212

[Close]

BLAST of CSPI03G46560 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-23
Identity = 53/111 (47.75%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 142 YYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSRAILASPTDGELLALYGKLVWD 201
           YY  M+  NP ++LL  NY KFL EV  D K+AEE   RAIL +  DG +L+LY  L+  
Sbjct: 168 YYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILH 227

Query: 202 TQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEEDEAAASAEDSAAG 253
             +D+QRA  Y+ +AV  SP DC V   YA F+W+V+EDE     ED A G
Sbjct: 228 NHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDE-----EDEALG 273

[Close]

BLAST of CSPI03G46560 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 8.3e-23
Identity = 85/268 (31.72%), Postives = 122/268 (45.52%), Query Frame = 0


Query: 5   LLRTGSVPLL-----------SPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYC 64
           LLR+ S PLL           SP  T  S     +     L +S +S   SP S+   + 
Sbjct: 2   LLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSV---HS 61

Query: 65  TRNHSNHIRRAASESDIVRSLHQVSNTSDQFSGLA-------------SRSRSRSSFPSK 124
           + + S  ++R AS+SD+          S   SG A              R+ S       
Sbjct: 62  SDDSSRRMKRTASDSDLRHLTSTKPPVSKFLSGGALMEDVDEGIGFGLIRTSSYDGISWA 121

Query: 125 IPEE-EFLNEDHDQIFDGDSMEEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRN 184
           + E+ E        +F G          +   G +D + +  +Y  M++ NP + + L N
Sbjct: 122 LDEDTEVAGGGGGGMFHGGGKGRSGGRSDGGDGGDDNTDV--HYRKMIEANPGNGIFLSN 181

Query: 185 YGKFLHEVANDSKRAEECYSRAILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYA 244
           Y KFL EV  D  +AEE   RAIL SP DG +LA+Y +LVW   +D  RA+ YF++AV A
Sbjct: 182 YAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAENYFNQAVAA 241

Query: 245 SPNDCLVTGHYAHFMWEVEEDEAAASAE 248
           +P DC V   YA F+W+ EE+E     E
Sbjct: 242 APEDCYVQASYARFLWDAEEEEEEEKEE 264

[Close]

BLAST of CSPI03G46560 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 8.6e-20
Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 135 DRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSRAILASPTDGELLAL 194
           D    G YY+ ML+  P   LLL+NY KFL E   D   AEE Y +  +  P+DG  LA 
Sbjct: 117 DDKNCGDYYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALAN 176

Query: 195 YGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEV---EEDEAAASAEDSAA 253
           YG+LV    +D+ +A  YF+RAV ASP+D +V   YA F+WE+   ++DE     +D ++
Sbjct: 177 YGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDDDESS 236

The following BLAST results are available for this feature:

BLAST of CSPI03G46560 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G46560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH65	8.4e-140	100.00	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G901150 ...	[more]
A0A5D3E5U4	2.6e-109	85.94	Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CQ68	2.6e-109	85.94	uncharacterized protein LOC103503559 OS=Cucumis melo OX=3656 GN=LOC103503559 PE=...	[more]
A0A6J1EX26	2.2e-79	62.32	uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K5B2	9.2e-78	61.96	uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305...	[more]

BLAST of CSPI03G46560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136396.1	1.7e-139	100.00	uncharacterized protein LOC101218835 [Cucumis sativus] >KGN60369.1 hypothetical ...	[more]
XP_008465993.1	5.5e-109	85.94	PREDICTED: uncharacterized protein LOC103503559 [Cucumis melo] >KAA0038565.1 Tet...	[more]
XP_038888361.1	6.5e-86	70.52	uncharacterized protein LOC120078207 [Benincasa hispida]	[more]
XP_022930988.1	4.5e-79	62.32	uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothet...	[more]
XP_023532088.1	1.0e-78	61.96	uncharacterized protein LOC111794359 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI03G46560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17940.1	4.4e-40	38.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	2.6e-24	49.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	1.7e-23	47.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G20190.1	8.3e-23	31.72	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	8.6e-20	42.15	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 133..234 e-value: 8.3E-12 score: 46.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 141..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR26312:SF123	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..242
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G46560.1	CSPI03G46560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding