CSPI03G46150 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G46150
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein Tat like
Location	Chr3: 39466205 .. 39466794 (-)
RNA-Seq Expression	CSPI03G46150
Synteny	CSPI03G46150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTGATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCATCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCACTGTTTTCAGTATTTGTGAGTGACTTGTTTGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTGTGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGTATACAAAATCTCTCCTCCGACAGCAAAATCTAAGATTGAAGAACATAAGGCAACAACAGATGAAGTTTAAAGAAAATTGGAGGTTGGGGTTTGGCATGCTTGAGGAGCTATGAATGTTGTTCACCATTACTTTTCAGAAAAACTCTCTTCTCAGTAATAATGATCCTCGTGCTTCACCTGATTCTCTGCCTTCTGTTGCCATCATCGTCTTTTTCCTTTCTCAAATTATGGAGCTAACAACATGGTGCCATTACATCAATTTCAACCTCTGTTCTTTTGTTGTACATCCAATTATTTTGTTAGCATAGGGAAAATAAAGGGCC

mRNA sequence

ATCTGATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCATCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCACTGTTTTCAGTATTTGTGAGTGACTTGTTTGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTGTGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGTATACAAAATCTCTCCTCCGACAGCAAAATCTAAGATTGAAGAACATAAGGCAACAACAGATGAAGTTTAAAGAAAATTGGAGGTTGGGGTTTGGCATGCTTGAGGAGCTATGAATGTTGTTCACCATTACTTTTCAGAAAAACTCTCTTCTCAGTAATAATGATCCTCGTGCTTCACCTGATTCTCTGCCTTCTGTTGCCATCATCGTCTTTTTCCTTTCTCAAATTATGGAGCTAACAACATGGTGCCATTACATCAATTTCAACCTCTGTTCTTTTGTTGTACATCCAATTATTTTGTTAGCATAGGGAAAATAAAGGGCC

Coding sequence (CDS)

ATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCATCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCACTGTTTTCAGTATTTGTGAGTGACTTGTTTGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTGTGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGTATACAAAATCTCTCCTCCGACAGCAAAATCTAAGATTGAAGAACATAAGGCAACAACAGATGAAGTTTAAAGAAAATTGGAGGTTGGGGTTTGGCATGCTTGAGGAGCTATGA

Protein sequence

MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYYEDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGMLEEL*

Homology

[Close]

BLAST of CSPI03G46150 vs. ExPASy TrEMBL
Match: A0A0A0LJX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895720 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.9e-53
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120
           EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM
Sbjct: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

[Close]

BLAST of CSPI03G46150 vs. ExPASy TrEMBL
Match: A0A5A7TB69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005000 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLL+IFFLLIVLFLSSSLALFSVFVSDL+DAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120
           EDVKAEIELGLSLI+FGVMGFGVDVVL TKSLLRQQNL LKNIRQQQMK KE WR  FGM
Sbjct: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

[Close]

BLAST of CSPI03G46150 vs. ExPASy TrEMBL
Match: A0A6A1UX23 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G014171 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.8e-09
Identity = 49/108 (45.37%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
           M+PNLDLL LA LYGSFIA +LL ++  +L+ L L+ S+ LFS+ V DL   +SV SL+Y
Sbjct: 1   MIPNLDLLLLAFLYGSFIACVLLAVLSVILLSLCLAFSVTLFSIVVIDLHYVFSVCSLHY 60

Query: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQM 109
             +KA ++LG  LI++ +M + V +VL +K+ L Q   ++ NIR++++
Sbjct: 61  ITLKANLQLGSVLILYIIMRYSVPMVLASKASLEQ---KIYNIRKKRL 105

[Close]

BLAST of CSPI03G46150 vs. ExPASy TrEMBL
Match: A0A2R6QZJ5 (Protein Tat like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12507 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.8e-09
Identity = 45/93 (48.39%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1  MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
          MVPNLDL+ LA L+GSFI+ ILLL+IF  LI L L+ S+ALFS+ + D +  +S++SLY+
Sbjct: 1  MVPNLDLILLAFLHGSFISCILLLVIFLTLICLLLAFSIALFSIVLIDSYHIFSLVSLYF 60

Query: 61 EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLL 94
            ++A +E+G ++ VF +M F V+  L +K L+
Sbjct: 61 GTLRANVEMGFAIGVFTLMHFMVNAALDSKPLV 93

[Close]

BLAST of CSPI03G46150 vs. ExPASy TrEMBL
Match: A0A4S4DYY3 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013584 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.3e-08
Identity = 41/90 (45.56%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 1  MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
          MVPNLDL+ +A L+GSFI+ ILL+  F +LI L L+ S+ LFS+ + D +D +S++SLY+
Sbjct: 1  MVPNLDLILIAVLHGSFISCILLVFTFLMLICLLLAFSITLFSIVIIDSYDVFSMISLYF 60

Query: 61 EDVKAEIELGLSLIVFGVMGFGVDVVLYTK 91
            ++A +ELG  L++F ++ F V+  L +K
Sbjct: 61 GTLRANVELGFVLVLFTLLHFMVNAGLASK 90

[Close]

BLAST of CSPI03G46150 vs. NCBI nr
Match: KGN60326.1 (hypothetical protein Csa_001171 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 6.0e-53
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120
           EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM
Sbjct: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

[Close]

BLAST of CSPI03G46150 vs. NCBI nr
Match: KAA0038615.1 (hypothetical protein E6C27_scaffold92G001450 [Cucumis melo var. makuwa] >TYK31214.1 hypothetical protein E5676_scaffold455G005000 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.9e-47
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLL+IFFLLIVLFLSSSLALFSVFVSDL+DAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120
           EDVKAEIELGLSLI+FGVMGFGVDVVL TKSLLRQQNL LKNIRQQQMK KE WR  FGM
Sbjct: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

[Close]

BLAST of CSPI03G46150 vs. NCBI nr
Match: KAG6591737.1 (putative beta-1,4-xylosyltransferase IRX9H, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.4 bits (337), Expect = 6.7e-28
Identity = 82/120 (68.33%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
           MVP+LDL+ALACLYG FIAL LLL+I  LL+V FLS++LALFSVFV DL+DAYSV+  YY
Sbjct: 525 MVPSLDLIALACLYGCFIALTLLLLISSLLVVFFLSATLALFSVFVGDLYDAYSVLCPYY 584

Query: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120
           E++KAE ELG+ L+++GVMGFGVDVVL  KSL RQQNLR   +R  QMK KE   LGFG+
Sbjct: 585 EELKAETELGVCLMMYGVMGFGVDVVLGIKSLFRQQNLRF-TVRLPQMKGKEKRWLGFGL 643

[Close]

BLAST of CSPI03G46150 vs. NCBI nr
Match: KAG7024618.1 (hypothetical protein SDJN02_13436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.4 bits (337), Expect = 6.7e-28
Identity = 82/120 (68.33%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
           MVP+LDL+ALACLYG FIAL LLL+I  LL+V FLS++LALFSVFV DL+DAYSV+  YY
Sbjct: 136 MVPSLDLIALACLYGCFIALTLLLLISSLLVVFFLSATLALFSVFVGDLYDAYSVLCPYY 195

Query: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120
           E++KAE ELG+ L+++GVMGFGVDVVL  KSL RQQNLR   +R  QMK KE   LGFG+
Sbjct: 196 EELKAETELGVCLMMYGVMGFGVDVVLGIKSLFRQQNLRF-TVRLPQMKGKEKRWLGFGL 254

[Close]

BLAST of CSPI03G46150 vs. NCBI nr
Match: KAB1204378.1 (hypothetical protein CJ030_MR8G014171 [Morella rubra])

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-08
Identity = 49/108 (45.37%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60
           M+PNLDLL LA LYGSFIA +LL ++  +L+ L L+ S+ LFS+ V DL   +SV SL+Y
Sbjct: 1   MIPNLDLLLLAFLYGSFIACVLLAVLSVILLSLCLAFSVTLFSIVVIDLHYVFSVCSLHY 60

Query: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQM 109
             +KA ++LG  LI++ +M + V +VL +K+ L Q   ++ NIR++++
Sbjct: 61  ITLKANLQLGSVLILYIIMRYSVPMVLASKASLEQ---KIYNIRKKRL 105

The following BLAST results are available for this feature:

BLAST of CSPI03G46150 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G46150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJX1	2.9e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895720 PE=4 SV=1	[more]
A0A5A7TB69	1.4e-47	92.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6A1UX23	9.8e-09	45.37	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G014171 PE=4 SV=1	[more]
A0A2R6QZJ5	9.8e-09	48.39	Protein Tat like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12...	[more]
A0A4S4DYY3	6.3e-08	45.56	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0135...	[more]

BLAST of CSPI03G46150 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60326.1	6.0e-53	100.00	hypothetical protein Csa_001171 [Cucumis sativus]	[more]
KAA0038615.1	2.9e-47	92.74	hypothetical protein E6C27_scaffold92G001450 [Cucumis melo var. makuwa] >TYK3121...	[more]
KAG6591737.1	6.7e-28	68.33	putative beta-1,4-xylosyltransferase IRX9H, partial [Cucurbita argyrosperma subs...	[more]
KAG7024618.1	6.7e-28	68.33	hypothetical protein SDJN02_13436, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAB1204378.1	2.0e-08	45.37	hypothetical protein CJ030_MR8G014171 [Morella rubra]	[more]

BLAST of CSPI03G46150 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G46150.1	CSPI03G46150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane