CSPI03G45560 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G45560
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 38974825 .. 38975214 (-)
RNA-Seq ExpressionCSPI03G45560
SyntenyCSPI03G45560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTCCTTCAAGTAGTGTTGTTCCAAGCCGTAAATAGATTCAGATTCATTTCCAGTAACTAGCGCTGACTTCTAGAGCTTCCTTCTCATATAGCTACGATATTCAATACGAAATTCAATCACAGATAACCTAAACCGTAACTTAAACAGAAAAAAACAATGAGGAATTCAGATATTCTACTTCTTTTGGTGGTGATTTGCTAGCAATTGAGATTGTAGATTTCGAAGCTTTCCAGCTTCCACTGGCGAAGCTCCTTCTTCCTCCGGCTTCTGAGGCTTGTGTGGCCGGCCGTGCATTTCCAGTGAACTACAATATTGTTCGGAAGGATCAAAATCTGCGCCTCTGAAGAAAACGAATATTCGACCCCAAACGAACTAACCAAGAG

mRNA sequence

ATGGAGATTCCTTCAAGTAGTGTTGTTCCAAGCCCAATTGAGATTGTAGATTTCGAAGCTTTCCAGCTTCCACTGGCGAAGCTCCTTCTTCCTCCGGCTTCTGAGGCTTGTGTGGCCGGCCGTGCATTTCCAGTGAACTACAATATTGTTCGGAAGGATCAAAATCTGCGCCTCTGAAGAAAACGAATATTCGACCCCAAACGAACTAACCAAGAG

Coding sequence (CDS)

ATGGAGATTCCTTCAAGTAGTGTTGTTCCAAGCCCAATTGAGATTGTAGATTTCGAAGCTTTCCAGCTTCCACTGGCGAAGCTCCTTCTTCCTCCGGCTTCTGAGGCTTGTGTGGCCGGCCGTGCATTTCCAGTGAACTACAATATTGTTCGGAAGGATCAAAATCTGCGCCTCTGA

Protein sequence

MEIPSSSVVPSPIEIVDFEAFQLPLAKLLLPPASEACVAGRAFPVNYNIVRKDQNLRL*
Homology
[Close]
BLAST of CSPI03G45560 vs. ExPASy TrEMBL
Match: A0A0A0LGX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892180 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.6e-23
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0 

Query: 1  MEIPSSSVVPSPIEIVDFEAFQLPLAKLLLPPASEACVAGRAFPVNYNIVRKDQNLRL 59
          MEIPSSSVVPSPIEIVDFEAFQLPLAKLLLPPASEAC AGRAFPVNYNIVRKDQNLRL
Sbjct: 1  MEIPSSSVVPSPIEIVDFEAFQLPLAKLLLPPASEACAAGRAFPVNYNIVRKDQNLRL 58

[Close]
BLAST of CSPI03G45560 vs. NCBI nr
Match: KGN60264.1 (hypothetical protein Csa_001693 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0 

Query: 1  MEIPSSSVVPSPIEIVDFEAFQLPLAKLLLPPASEACVAGRAFPVNYNIVRKDQNLRL 59
          MEIPSSSVVPSPIEIVDFEAFQLPLAKLLLPPASEAC AGRAFPVNYNIVRKDQNLRL
Sbjct: 1  MEIPSSSVVPSPIEIVDFEAFQLPLAKLLLPPASEACAAGRAFPVNYNIVRKDQNLRL 58

The following BLAST results are available for this feature:
BLAST of CSPI03G45560 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G45560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGX49.6e-2398.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892180 PE=4 SV=1[more]
BLAST of CSPI03G45560 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60264.12.0e-2298.28hypothetical protein Csa_001693 [Cucumis sativus][more]
BLAST of CSPI03G45560 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G45560.1CSPI03G45560.1mRNA