CSPI03G45450 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G45450
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 38897866 .. 38898349 (-)
RNA-Seq ExpressionCSPI03G45450
SyntenyCSPI03G45450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGGGGAAAGGGAATTCTTAGCGAGTGCAAAATCTGGCAGCGGTGTGATTACCACCCACAAGGGCTACACGAGAGGATTGAATTCTTGACCATAAGAACATCAATTGCCTCGTACGAAGCACCTCCATGGTTTCTCCTTGTCAGTCCCCAGATCGATGGTTGTGTGATTTGGCCCAAAAATAAGATTGAGTTTCTTCGTCCTATCGACGCATCGCCTGAAACCACACGACCACCGATCAGAGAGACATTAAGAAGCTCAGAAAATGTATGAATTTTGGATGATTTTTTCCCTTTCCCCTTTTTTTGTTTTCGAATGATTCTGTGGATCATTGTGAAATAAATGGAAGAAGAGAAAGAGAGAACAGAAGAATTAGTTTAGTTTAACTTTTTTGACGGAAAGTTGTTTGATTTTTGGTGCAGGAAGTTGAAGATTCATGGCTGATTTTGATTTCCATTCATATCCCATTTGCATGGATCTAA

mRNA sequence

ATGCAGGGGGAAAGGGAATTCTTAGCGAGTGCAAAATCTGGCAGCGGTATCGATGGTTGTGTGATTTGGCCCAAAAATAAGATTGAGTTTCTTCGTCCTATCGACGCATCGCCTGAAACCACACGACCACCGATCAGAGAGACATTAAGAAGCTCAGAAAATGAAGTTGAAGATTCATGGCTGATTTTGATTTCCATTCATATCCCATTTGCATGGATCTAA

Coding sequence (CDS)

ATGCAGGGGGAAAGGGAATTCTTAGCGAGTGCAAAATCTGGCAGCGGTATCGATGGTTGTGTGATTTGGCCCAAAAATAAGATTGAGTTTCTTCGTCCTATCGACGCATCGCCTGAAACCACACGACCACCGATCAGAGAGACATTAAGAAGCTCAGAAAATGAAGTTGAAGATTCATGGCTGATTTTGATTTCCATTCATATCCCATTTGCATGGATCTAA

Protein sequence

MQGEREFLASAKSGSGIDGCVIWPKNKIEFLRPIDASPETTRPPIRETLRSSENEVEDSWLILISIHIPFAWI*
Homology
[Close]
BLAST of CSPI03G45450 vs. ExPASy TrEMBL
Match: A0A0A0LEP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G890090 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.0e-35
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MQGEREFLASAKSGSGIDGCVIWPKNKIEFLRPIDASPETTRPPIRETLRSSENEVEDSW 60
          MQGEREFLASAKSGSGIDGCVIWPKNKIEFLRPIDASPETTRPPIRETLRSSENEVEDSW
Sbjct: 1  MQGEREFLASAKSGSGIDGCVIWPKNKIEFLRPIDASPETTRPPIRETLRSSENEVEDSW 60

Query: 61 LILISIHIPFAWI 74
          LILISIHIPFAWI
Sbjct: 61 LILISIHIPFAWI 73

[Close]
BLAST of CSPI03G45450 vs. NCBI nr
Match: KGN60253.1 (hypothetical protein Csa_001662 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MQGEREFLASAKSGSGIDGCVIWPKNKIEFLRPIDASPETTRPPIRETLRSSENEVEDSW 60
          MQGEREFLASAKSGSGIDGCVIWPKNKIEFLRPIDASPETTRPPIRETLRSSENEVEDSW
Sbjct: 1  MQGEREFLASAKSGSGIDGCVIWPKNKIEFLRPIDASPETTRPPIRETLRSSENEVEDSW 60

Query: 61 LILISIHIPFAWI 74
          LILISIHIPFAWI
Sbjct: 61 LILISIHIPFAWI 73

The following BLAST results are available for this feature:
BLAST of CSPI03G45450 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G45450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEP38.0e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G890090 PE=4 SV=1[more]
BLAST of CSPI03G45450 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60253.11.7e-34100.00hypothetical protein Csa_001662 [Cucumis sativus][more]
BLAST of CSPI03G45450 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G45450.1CSPI03G45450.1mRNA