CSPI03G44240 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G44240
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
LocationChr3: 37913932 .. 37915709 (+)
RNA-Seq ExpressionCSPI03G44240
SyntenyCSPI03G44240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGAGTAGCCCATCTATCTTATATGGAGTATGAGTCTCCTTGGTTTTTCCAATATGGAAATCTCAACTTCTCCAATATGTCCCCCTCAAGATGGTGCTTCTTTGGTTCACCTATCTTGAACCAAATACCCGTTTGGGTTTACTGGACTCTGATATCATGTTAAATTTGATAGTATAGGGTTCCATCTCAAAACCAATTGGCAATGAGAGGAGTAGCCCATCTATCTTATATGGAGTATGAGTCTCCTTGGTTTTTCCAATGTGGGACTCCCAACTTCTCCAATACTAATACTAAACTTACCTTCCCCTCATAAGTTTAAACTTTTCGGTCGATTGGTGATTTAACCATGGTTAAATCTCTCATTTTGCCCATTAGTCTTAAGTAGACTTTTACCATTTAGGCGACGTTTGGTCCGCAAGTTTGGAATCTTAAGCCTAAGAATGTTAAGTCGGGGGATAAGGCTGAGAGGTTTAGGTAGTCTGGGAATGTGAAAGATTTTATCTCATTAGGCCCGTGAAAGATTTCCATTCGGCAGGAGCACTAGAGGAATGTCATTGTTCAATAAGTTTATTGATTCAGTTTCTCTCATGGAAATTTGATAGACCCCCTATCATACACCAATATAATAGGAGAGGGAAAAAGAATTGACACCTGCGAATGAGGGAGAGGGTGTATGTGAGAGTAAAGTAGTTAGAAAGTATTAATAGTGGAAAGGAGAGGGCGGGAAAGTCAGTTAAGCTTTTGGTTAGAGAAGAGTTTCTGTTCTACCTTGAGAGATTGGTTAGCAGAAGGGAGTTCATACATCTTTGAGATCTGATTAGAGATTGTAACCTAGATTCACCATTGCATCTAGTACTTACTATTCAATATAGTTTCTGGTTTCCATCAAAATTCCATCTTAAAATGGTAGGTTCACTTGGTCTAGAGATGGTAATTCTCCTTCCAGATCATTATTAGACAGATTCTTCATAAATCAGGTGTGGGATGTTTGTTTTGAAAATTCTTGGGTTTCACAAAAAGCACGTATCTTCTCATATCACTTTCCTTTAATCTTGGGGGCTGGTGCTTTTCTTTGGGGTCCCTCTCCTTTTTGGTTTTGTAACAACTGGTTGCTGTCCAGTGATTGTAATCAGACTATTGCTGAAACAGTGAGCAATTCAAACTTCCATGGATGGGCCGGTTTCATTCTTCATGAGCAGTCGAGATCAGTTAAATTGGCAGTAAAAGCTTGGAATATTGCAGCGCAAAGCCAAGGTAAAAGAAAGAGAGAAATCCTTGCTGTCAGAATTAGAAAAATACGATTATGTGGCTGAGTTGATTGGGTTAAATGAAGAAGAGTTGGATTCTAGAGCAGCTTTGCAAGCGGAATTACTTAGCTTTTACCAAAATGAAGAGCGTAATTATATTCAGAAGAGTAAACTCAATTGGCTGTCTTTGGGTGATGAGAATACAGATTTCTTCCACCGTTTTCTAAATGCAAAAGAAAGAAGGAACCTCATAACTGAATTAAAAGATGATAATGGGGTCGTCTCGACTTCATTCCACGACATTGAAAGGCTTGTGCTAGAATTTTTTGAGACACTTTATACAAGAATTCCGGGGGACAGATTCACCCCTATTAATAGCAATTGGTCTTGTGTTTCCTCAATTCAGAATGAGGCTCTCGTTAACCAGTTTTCAGTGGAGGAGATCTTTAAAGCCTTAAAGGCACTTGGCAGCAATAAAGCTCCGGGCCTGGATGGATTCACAGCGGAGTTCCTAATCACCCACTGA

mRNA sequence

ATGAGAGGAGTAGCCCATCTATCTTATATGGAGTATGAGTCTCCTTGGTTTTTCCAATATGGAAATCTCAACTTCTCCAATATGTCCCCCTCAAGATGGTGCTTCTTTGGTTCACCTATCTTGAACCAAATACCCGTTTGGGCGACGTTTGGTCCGCAAGTTTGGAATCTTAAGCCTAAGAATGTTAAGTCGGGGGATAAGGCTGAGAGGTTTAGGTTCACTTGGTCTAGAGATGGTAATTCTCCTTCCAGATCATTATTAGACAGATTCTTCATAAATCAGGTGTGGGATGTTTGTTTTGAAAATTCTTGGGTTTCACAAAAAGCACGTATCTTCTCATATCACTTTCCTTTAATCTTGGGGGCTGGTGCTTTTCTTTGGGGTCCCTCTCCTTTTTGGTTTTGTAACAACTGGTTGCTGTCCAGTGATTGTAATCAGACTATTGCTGAAACAGTGAGCAATTCAAACTTCCATGGATGGGCCGGTTTCATTCTTCATGAGCAGTCGAGATCAGTTAAATTGGCAGTAAAAGCTTGGAATATTGCAGCGCAAAGCCAAGAATTAGAAAAATACGATTATGTGGCTGAGTTGATTGGGTTAAATGAAGAAGAGTTGGATTCTAGAGCAGCTTTGCAAGCGGAATTACTTAGCTTTTACCAAAATGAAGAGCGTAATTATATTCAGAAGAGTAAACTCAATTGGCTGTCTTTGGGTGATGAGAATACAGATTTCTTCCACCGTTTTCTAAATGCAAAAGAAAGAAGGAACCTCATAACTGAATTAAAAGATGATAATGGGGTCGTCTCGACTTCATTCCACGACATTGAAAGGCTTGTGCTAGAATTTTTTGAGACACTTTATACAAGAATTCCGGGGGACAGATTCACCCCTATTAATAGCAATTGGTCTTGTGTTTCCTCAATTCAGAATGAGGCTCTCGTTAACCAGTTTTCAGTGGAGGAGATCTTTAAAGCCTTAAAGGCACTTGGCAGCAATAAAGCTCCGGGCCTGGATGGATTCACAGCGGAGTTCCTAATCACCCACTGA

Coding sequence (CDS)

ATGAGAGGAGTAGCCCATCTATCTTATATGGAGTATGAGTCTCCTTGGTTTTTCCAATATGGAAATCTCAACTTCTCCAATATGTCCCCCTCAAGATGGTGCTTCTTTGGTTCACCTATCTTGAACCAAATACCCGTTTGGGCGACGTTTGGTCCGCAAGTTTGGAATCTTAAGCCTAAGAATGTTAAGTCGGGGGATAAGGCTGAGAGGTTTAGGTTCACTTGGTCTAGAGATGGTAATTCTCCTTCCAGATCATTATTAGACAGATTCTTCATAAATCAGGTGTGGGATGTTTGTTTTGAAAATTCTTGGGTTTCACAAAAAGCACGTATCTTCTCATATCACTTTCCTTTAATCTTGGGGGCTGGTGCTTTTCTTTGGGGTCCCTCTCCTTTTTGGTTTTGTAACAACTGGTTGCTGTCCAGTGATTGTAATCAGACTATTGCTGAAACAGTGAGCAATTCAAACTTCCATGGATGGGCCGGTTTCATTCTTCATGAGCAGTCGAGATCAGTTAAATTGGCAGTAAAAGCTTGGAATATTGCAGCGCAAAGCCAAGAATTAGAAAAATACGATTATGTGGCTGAGTTGATTGGGTTAAATGAAGAAGAGTTGGATTCTAGAGCAGCTTTGCAAGCGGAATTACTTAGCTTTTACCAAAATGAAGAGCGTAATTATATTCAGAAGAGTAAACTCAATTGGCTGTCTTTGGGTGATGAGAATACAGATTTCTTCCACCGTTTTCTAAATGCAAAAGAAAGAAGGAACCTCATAACTGAATTAAAAGATGATAATGGGGTCGTCTCGACTTCATTCCACGACATTGAAAGGCTTGTGCTAGAATTTTTTGAGACACTTTATACAAGAATTCCGGGGGACAGATTCACCCCTATTAATAGCAATTGGTCTTGTGTTTCCTCAATTCAGAATGAGGCTCTCGTTAACCAGTTTTCAGTGGAGGAGATCTTTAAAGCCTTAAAGGCACTTGGCAGCAATAAAGCTCCGGGCCTGGATGGATTCACAGCGGAGTTCCTAATCACCCACTGA

Protein sequence

MRGVAHLSYMEYESPWFFQYGNLNFSNMSPSRWCFFGSPILNQIPVWATFGPQVWNLKPKNVKSGDKAERFRFTWSRDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSPFWFCNNWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAWNIAAQSQELEKYDYVAELIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENTDFFHRFLNAKERRNLITELKDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNWSCVSSIQNEALVNQFSVEEIFKALKALGSNKAPGLDGFTAEFLITH*
Homology
BLAST of CSPI03G44240 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.5e-08
Identity = 77/300 (25.67%), Postives = 126/300 (42.00%), Query Frame = 0

Query: 71  FRFTWSRDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGP- 130
           F +   RDG+  S+S +DR +I+       ++S +  +   FS H  + L        P 
Sbjct: 189 FTYVRVRDGH-VSQSRIDRIYISSHLMSRAQSSTI--RLAPFSDHNCVSLRMSIAPSLPK 248

Query: 131 SPFWFCNNWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAWNIAAQSQELE 190
           + +W  NN LL    ++  A++V ++ + GW  F    Q     L  + W++     +L 
Sbjct: 249 AAYWHFNNSLLE---DEGFAKSVRDT-WRGWRAF----QDEFATLN-QWWDVGKVHLKLL 308

Query: 191 KYDYV--------AELIGLNEEELD--------SRAALQAELL-------SFYQNEERNY 250
             +Y         AE+  LN E LD           ALQ E L       +  Q + R  
Sbjct: 309 CQEYTKSVSGQRNAEIEALNGEVLDLEQRLSGSEDQALQCEYLERKEALRNMEQRQARGA 368

Query: 251 IQKSKLNWLSLGDENTDFFHRFLNAKERRNLITELKDDNGVVSTSFHDIERLVLEFFETL 310
             +S++  L   D  + FF+     K  R  IT L  ++G        I      F++ L
Sbjct: 369 FVRSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNL 428

Query: 311 YTRIP--GDRFTPINSNWSCVSSIQNEALVNQFSVEEIFKALKALGSNKAPGLDGFTAEF 345
           ++  P   D    +      VS  + E L    +++E+ +AL+ +  NK+PGLDG T EF
Sbjct: 429 FSPDPISPDACEELWDGLPVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEF 476

BLAST of CSPI03G44240 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 8.7e-04
Identity = 42/173 (24.28%), Postives = 76/173 (43.93%), Query Frame = 0

Query: 181 IAAQSQELEKYDYVAELIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDE 240
           + +Q +ELEK +         +E       ++AEL      +    I +S+  +    ++
Sbjct: 317 LTSQLKELEKQEQTHSKASRRQE----ITKIRAELKEIETQKTLQKINESRSWFFERINK 376

Query: 241 NTDFFHRFLNAKERRNLITELKDDNGVVSTSFHDIERLVLEFFETLY-TRIPG------- 300
                 R +  K  +N I  +K+D G ++T   +I+  + E+++ LY  ++         
Sbjct: 377 IDRPLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTF 436

Query: 301 -DRFTPINSNWSCVSSIQNEALVNQFSVEEIFKALKALGSNKAPGLDGFTAEF 345
            D +T    N   V     E+L    +  EI   + +L + K+PG DGFTAEF
Sbjct: 437 LDTYTLPRLNQEEV-----ESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEF 480

BLAST of CSPI03G44240 vs. ExPASy TrEMBL
Match: A0A5D3BXH7 (Exodeoxyribonuclease-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00160 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.4e-43
Identity = 112/277 (40.43%), Postives = 137/277 (49.46%), Query Frame = 0

Query: 72  RFTWSRDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSP 131
           R+TW R+G + S+SL +RFFIN+ WD  F+NS VS KARIFS H PL L AGA +WGPSP
Sbjct: 306 RYTWPREGGTSSKSLSNRFFINKEWDDLFKNSRVSHKARIFSNHLPLFLKAGAIIWGPSP 365

Query: 132 FWFCNNWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAWNIAAQSQELEKY 191
           F FCN+WL+++DCNQ IA+T+ + N+                                  
Sbjct: 366 FRFCNSWLMNNDCNQVIADTLCSFNYQ--------------------------------- 425

Query: 192 DYVAELIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENTDFFHRFLNA 251
                L+GLN EEL  R+ALQAE+LS Y+ E  N+IQKSKLNWL++ DENT+        
Sbjct: 426 ----VLVGLNVEELVFRSALQAEILSIYRIEGHNFIQKSKLNWLAVVDENTN-------- 476

Query: 252 KERRNLITELKDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNWSCVSSIQNE 311
                                             LY RIP                    
Sbjct: 486 ----------------------------------LYKRIP-------------------- 476

Query: 312 ALVNQFSVEEIFKALKALGSNKAPGLDGFTAEFLITH 349
                  VEEIF  +KALG NKAPG DGFTAEFLI H
Sbjct: 546 -------VEEIFNPIKALGKNKAPGPDGFTAEFLIKH 476

BLAST of CSPI03G44240 vs. ExPASy TrEMBL
Match: A0A438DFY9 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_615 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.0e-36
Identity = 90/279 (32.26%), Postives = 139/279 (49.82%), Query Frame = 0

Query: 73  FTWSRDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSPF 132
           FTWS    SP    LDRF  +  W + F         R  S H+P+++    F+WGP+PF
Sbjct: 181 FTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTPF 240

Query: 133 WFCNNWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAWNIAAQSQ------ 192
            F N WL  ++  +   +  S    +GW G     + + VK  +K WN  +  +      
Sbjct: 241 RFENMWLQHTNFKENFRDWWSGFQGNGWEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKK 300

Query: 193 ----ELEKYDYVAELIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENT 252
               +L  +D + +  GLN + L  RA+ + EL      EE ++ QK+K+ W+  GD N+
Sbjct: 301 SILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILREEIHWRQKAKVKWVKEGDCNS 360

Query: 253 DFFHRFLNAKERRNLITELKDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNW 312
            F+H+  N +  R  I EL+++ G+V  +   I   +L +FE LYT   G+ +     +W
Sbjct: 361 KFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDW 420

Query: 313 SCVSSIQNEALVNQFSVEEIFKALKALGSNKAPGLDGFT 342
           S +S      L + F+ EEI KA+  L  +KAPG DGFT
Sbjct: 421 SPISEESALRLDSPFTEEEISKAIFQLDRDKAPGPDGFT 459

BLAST of CSPI03G44240 vs. ExPASy TrEMBL
Match: A0A438JA13 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_396 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.0e-36
Identity = 90/279 (32.26%), Postives = 139/279 (49.82%), Query Frame = 0

Query: 73  FTWSRDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSPF 132
           FTWS    SP    LDRF  +  W + F         R  S H+P+++    F+WGP+PF
Sbjct: 529 FTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTPF 588

Query: 133 WFCNNWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAWNIAAQSQ------ 192
            F N WL  ++  +   +  S    +GW G     + + VK  +K WN  +  +      
Sbjct: 589 RFENMWLQHTNFKENFRDWWSGFQGNGWEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKK 648

Query: 193 ----ELEKYDYVAELIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENT 252
               +L  +D + +  GLN + L  RA+ + EL      EE ++ QK+K+ W+  GD N+
Sbjct: 649 SILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILREEIHWRQKAKVKWVKEGDCNS 708

Query: 253 DFFHRFLNAKERRNLITELKDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNW 312
            F+H+  N +  R  I EL+++ G+V  +   I   +L +FE LYT   G+ +     +W
Sbjct: 709 KFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDW 768

Query: 313 SCVSSIQNEALVNQFSVEEIFKALKALGSNKAPGLDGFT 342
           S +S      L + F+ EEI KA+  L  +KAPG DGFT
Sbjct: 769 SPISEESALRLDSPFTEEEISKAIFQLDRDKAPGPDGFT 807

BLAST of CSPI03G44240 vs. ExPASy TrEMBL
Match: A0A438FW30 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_762 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-35
Identity = 89/279 (31.90%), Postives = 139/279 (49.82%), Query Frame = 0

Query: 73  FTWSRDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSPF 132
           FTWS    SP    LDRF  +  W + F         R  S H+P+++    F+WGP+PF
Sbjct: 478 FTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTPF 537

Query: 133 WFCNNWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAWNIAAQSQ------ 192
            F N WL  ++  +   +  S     GW G     + + VK  +K WN ++  +      
Sbjct: 538 RFENMWLQHTNFKENFRDWWSGFQGIGWEGHKFMRRLQYVKAKLKEWNKSSFGELKEKKK 597

Query: 193 ----ELEKYDYVAELIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENT 252
               +L  +D + +  GLN + +  R + + EL      EE ++ QK+K+ W+  GD N+
Sbjct: 598 SILNDLANFDAIEQEGGLNPDLISQRVSRKGELEELILREEIHWRQKAKVKWVKEGDCNS 657

Query: 253 DFFHRFLNAKERRNLITELKDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNW 312
            F+H+  NA+  R  I EL+++ G+V  +   I   +L +FE LYT   G+ +     +W
Sbjct: 658 KFYHKVANARRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDW 717

Query: 313 SCVSSIQNEALVNQFSVEEIFKALKALGSNKAPGLDGFT 342
           S +S      L + F+ EEI KA+  L  +KAPG DGFT
Sbjct: 718 SPISEESALRLESPFTEEEISKAIFQLDRDKAPGPDGFT 756

BLAST of CSPI03G44240 vs. ExPASy TrEMBL
Match: A0A5A7UNL3 (GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001920 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-35
Identity = 99/254 (38.98%), Postives = 134/254 (52.76%), Query Frame = 0

Query: 77  RDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSPFWFCN 136
           R+G + +RSLLDRFFIN  WD  F+NS VS+KARIFS HFPL+L AGA LWGPS F FCN
Sbjct: 226 REGGTAARSLLDRFFINNKWDDEFDNSRVSRKARIFSDHFPLLLEAGAILWGPSSFRFCN 285

Query: 137 NWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAWNIAAQSQELEKYDYVAE 196
           +WLL  +CN  I E + +S   GWAGFILHEQ   VK AVK W             + A 
Sbjct: 286 SWLLIKECNTGIEEALKSSPGTGWAGFILHEQLHKVKNAVKNW-------------HTAH 345

Query: 197 LIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDEN---TDFFHRFLNAKE 256
            I L ++E+                EERNYIQKSKLNWL+  ++     DF    L    
Sbjct: 346 KIDLKQKEI----------------EERNYIQKSKLNWLAKKEDAIHVRDFRPISLTTIT 405

Query: 257 RRNLITELKDD-NGVVSTSFHDIERLVLEFFETLYTRIP---------GDRFTPINSNW- 316
            + +   L D   GV+ ++ +  +   +E  E  + R+            +F+P  ++W 
Sbjct: 406 YKVVANVLADRLKGVMVSTINPFQSAFIEDLEKAFDRVEWGILEKVMHRKKFSPKWTSWI 450

BLAST of CSPI03G44240 vs. NCBI nr
Match: XP_038884536.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-62
Identity = 130/265 (49.06%), Postives = 173/265 (65.28%), Query Frame = 0

Query: 92  INQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSPFWFCNNWLLSSDCNQTIAET 151
           ++Q WD  FE+S VS++AR  S HFPL+  AGAF WGPSPF FCN+WL + +C + I  +
Sbjct: 60  VSQNWDEFFEDSRVSRQARTISDHFPLLFEAGAFEWGPSPFRFCNSWLKNKECCRIIENS 119

Query: 152 VSNSNFHGWAGFILHEQSRSVKLAVKAW--------NIAAQS--QELEKYDYVAELIGLN 211
                   WAGF L+ + R VK +VK W         I  +S  +E+++ D  A+ +   
Sbjct: 120 SLIKGQQDWAGFALYSRLRRVKQSVKRWLAEHEKDQKIREESLLKEIKEKDLQADTLENF 179

Query: 212 EEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENTDFFHRFLNAKERRNLITEL 271
             E D R +L+A+LLS YQ EER+ IQKSKLNWL LGDENT FFHRFL AK R+NLI EL
Sbjct: 180 SAEEDVRVSLKADLLSLYQAEERDLIQKSKLNWLLLGDENTSFFHRFLAAKRRKNLIAEL 239

Query: 272 KDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNWSCVSSIQNEALVNQFSVEE 331
            ++ G+ + SF +IE ++L+FF  LYT+  G R  P+N  WS VS+  N  L+ +FS  E
Sbjct: 240 FNEQGLPTKSFREIETIILDFFSNLYTKCTGTRSIPLNMAWSRVSAEGNSRLIAKFSTTE 299

Query: 332 IFKALKALGSNKAPGLDGFTAEFLI 347
           I  A++ALG NKAPG DGFT EF++
Sbjct: 300 ITVAIQALGKNKAPGPDGFTVEFIL 324

BLAST of CSPI03G44240 vs. NCBI nr
Match: XP_038884537.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-62
Identity = 130/265 (49.06%), Postives = 173/265 (65.28%), Query Frame = 0

Query: 92  INQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSPFWFCNNWLLSSDCNQTIAET 151
           ++Q WD  FE+S VS++AR  S HFPL+  AGAF WGPSPF FCN+WL + +C + I  +
Sbjct: 60  VSQNWDEFFEDSRVSRQARTISDHFPLLFEAGAFEWGPSPFRFCNSWLKNKECCRIIENS 119

Query: 152 VSNSNFHGWAGFILHEQSRSVKLAVKAW--------NIAAQS--QELEKYDYVAELIGLN 211
                   WAGF L+ + R VK +VK W         I  +S  +E+++ D  A+ +   
Sbjct: 120 SLIKGQQDWAGFALYSRLRRVKQSVKRWLAEHEKDQKIREESLLKEIKEKDLQADTLENF 179

Query: 212 EEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENTDFFHRFLNAKERRNLITEL 271
             E D R +L+A+LLS YQ EER+ IQKSKLNWL LGDENT FFHRFL AK R+NLI EL
Sbjct: 180 SAEEDVRVSLKADLLSLYQAEERDLIQKSKLNWLLLGDENTSFFHRFLAAKRRKNLIAEL 239

Query: 272 KDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNWSCVSSIQNEALVNQFSVEE 331
            ++ G+ + SF +IE ++L+FF  LYT+  G R  P+N  WS VS+  N  L+ +FS  E
Sbjct: 240 FNEQGLPTKSFREIETIILDFFSNLYTKCTGTRSIPLNMAWSRVSAEGNSRLIAKFSTTE 299

Query: 332 IFKALKALGSNKAPGLDGFTAEFLI 347
           I  A++ALG NKAPG DGFT EF++
Sbjct: 300 ITVAIQALGKNKAPGPDGFTVEFIL 324

BLAST of CSPI03G44240 vs. NCBI nr
Match: XP_038884535.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-62
Identity = 130/265 (49.06%), Postives = 173/265 (65.28%), Query Frame = 0

Query: 92  INQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSPFWFCNNWLLSSDCNQTIAET 151
           ++Q WD  FE+S VS++AR  S HFPL+  AGAF WGPSPF FCN+WL + +C + I  +
Sbjct: 60  VSQNWDEFFEDSRVSRQARTISDHFPLLFEAGAFEWGPSPFRFCNSWLKNKECCRIIENS 119

Query: 152 VSNSNFHGWAGFILHEQSRSVKLAVKAW--------NIAAQS--QELEKYDYVAELIGLN 211
                   WAGF L+ + R VK +VK W         I  +S  +E+++ D  A+ +   
Sbjct: 120 SLIKGQQDWAGFALYSRLRRVKQSVKRWLAEHEKDQKIREESLLKEIKEKDLQADTLENF 179

Query: 212 EEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENTDFFHRFLNAKERRNLITEL 271
             E D R +L+A+LLS YQ EER+ IQKSKLNWL LGDENT FFHRFL AK R+NLI EL
Sbjct: 180 SAEEDVRVSLKADLLSLYQAEERDLIQKSKLNWLLLGDENTSFFHRFLAAKRRKNLIAEL 239

Query: 272 KDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNWSCVSSIQNEALVNQFSVEE 331
            ++ G+ + SF +IE ++L+FF  LYT+  G R  P+N  WS VS+  N  L+ +FS  E
Sbjct: 240 FNEQGLPTKSFREIETIILDFFSNLYTKCTGTRSIPLNMAWSRVSAEGNSRLIAKFSTTE 299

Query: 332 IFKALKALGSNKAPGLDGFTAEFLI 347
           I  A++ALG NKAPG DGFT EF++
Sbjct: 300 ITVAIQALGKNKAPGPDGFTVEFIL 324

BLAST of CSPI03G44240 vs. NCBI nr
Match: TYK03825.1 (exodeoxyribonuclease-like [Cucumis melo var. makuwa])

HSP 1 Score: 185.7 bits (470), Expect = 7.0e-43
Identity = 112/277 (40.43%), Postives = 137/277 (49.46%), Query Frame = 0

Query: 72  RFTWSRDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSP 131
           R+TW R+G + S+SL +RFFIN+ WD  F+NS VS KARIFS H PL L AGA +WGPSP
Sbjct: 306 RYTWPREGGTSSKSLSNRFFINKEWDDLFKNSRVSHKARIFSNHLPLFLKAGAIIWGPSP 365

Query: 132 FWFCNNWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAWNIAAQSQELEKY 191
           F FCN+WL+++DCNQ IA+T+ + N+                                  
Sbjct: 366 FRFCNSWLMNNDCNQVIADTLCSFNYQ--------------------------------- 425

Query: 192 DYVAELIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDENTDFFHRFLNA 251
                L+GLN EEL  R+ALQAE+LS Y+ E  N+IQKSKLNWL++ DENT+        
Sbjct: 426 ----VLVGLNVEELVFRSALQAEILSIYRIEGHNFIQKSKLNWLAVVDENTN-------- 476

Query: 252 KERRNLITELKDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPINSNWSCVSSIQNE 311
                                             LY RIP                    
Sbjct: 486 ----------------------------------LYKRIP-------------------- 476

Query: 312 ALVNQFSVEEIFKALKALGSNKAPGLDGFTAEFLITH 349
                  VEEIF  +KALG NKAPG DGFTAEFLI H
Sbjct: 546 -------VEEIFNPIKALGKNKAPGPDGFTAEFLIKH 476

BLAST of CSPI03G44240 vs. NCBI nr
Match: XP_038904301.1 (uncharacterized protein LOC120090656 [Benincasa hispida])

HSP 1 Score: 181.0 bits (458), Expect = 1.7e-41
Identity = 95/237 (40.08%), Postives = 141/237 (59.49%), Query Frame = 0

Query: 72  RFTWSRDGNSPSRSLLDRFFINQVWDVCFENSWVSQKARIFSYHFPLILGAGAFLWGPSP 131
           +FTWSR+G+  S+SLLD F ++  W+  F+NS V+++AR  S HFPL L AGAF WGPS 
Sbjct: 62  QFTWSREGDVASKSLLDHFLVSSTWEDVFDNSRVARQARTMSDHFPLTLEAGAFEWGPSS 121

Query: 132 FWFCNNWLLSSDCNQTIAETVSNSNFHGWAGFILHEQSRSVKLAVKAW--------NIAA 191
           F FCN+WL + +  + I +++     H WA   L    R  K A+K W         +  
Sbjct: 122 FRFCNSWLNNKESCKLIEKSLKKKENHQWAA-TLSTNLRKTKSALKKWFHEFGKEMKLKE 181

Query: 192 QS--QELEKYDYVAELIGLNEEELDSRAALQAELLSFYQNEERNYIQKSKLNWLSLGDEN 251
           +S   EL++ D +   +       D+  +L+A+LL+ YQ EE++ IQK KL WL  GDEN
Sbjct: 182 ESLLNELQRKDSLTVDVSSQIRVDDASYSLKADLLALYQLEEKSLIQKCKLKWLKEGDEN 241

Query: 252 TDFFHRFLNAKERRNLITELKDDNGVVSTSFHDIERLVLEFFETLYTRIPGDRFTPI 299
           T FFHRFL+ ++R+NL  +L +D  + +    DIE ++L F+  LY++  G R  P+
Sbjct: 242 TSFFHRFLSTRKRKNLFAKLLNDQDLPTRFTRDIEDIILGFYSLLYSKSDGPRAIPL 297

BLAST of CSPI03G44240 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-11
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 0

Query: 202 EEELDSRAALQAELLS-------------------FYQNEERNYIQKSKLNWLSLGDENT 261
           +E LDS  ++Q++LL+                   F    E  Y QKS++ WL  GD NT
Sbjct: 392 KEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANT 451

Query: 262 DFFHRFLNAKERRNLITELKDDNGVVSTSFHDIERLVLEFFETLYTRIPG---DRFTPIN 321
            FFH+ + A + +NLI  L+ D+ V   +   ++ +++ +    YT + G   D  TP  
Sbjct: 452 RFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY----YTHLLGSDSDILTP-- 511

Query: 322 SNWSCVSSIQ----NEALVNQFSV----EEIFKALKALGSNKAPGLDGFTAEF 345
            +   +  I     N+ L ++ S     +EI  A+ A+  NKAPG D FTAEF
Sbjct: 512 DSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEF 558

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143814.5e-0825.67Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
O003708.7e-0424.28LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3BXH73.4e-4340.43Exodeoxyribonuclease-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A438DFY99.0e-3632.26Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... [more]
A0A438JA139.0e-3632.26Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... [more]
A0A438FW301.5e-3531.90Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... [more]
A0A5A7UNL32.0e-3538.98GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G... [more]
Match NameE-valueIdentityDescription
XP_038884536.11.0e-6249.06DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida][more]
XP_038884537.11.0e-6249.06DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida][more]
XP_038884535.11.0e-6249.06DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida][more]
TYK03825.17.0e-4340.43exodeoxyribonuclease-like [Cucumis melo var. makuwa][more]
XP_038904301.11.7e-4140.08uncharacterized protein LOC120090656 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT1G43760.12.0e-1131.21DNAse I-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116:SF38OS01G0158850 PROTEINcoord: 74..344
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 74..344

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G44240.1CSPI03G44240.1mRNA