CSPI03G43800 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G43800
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 37590124 .. 37590882 (+)
RNA-Seq ExpressionCSPI03G43800
SyntenyCSPI03G43800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTGAATCACCAATTTCTTCCAGACGCCTGGACATATTGCGAAATTCTTGTCGTTGTAGTCGATTTCTTTCAACAAATCAAATCAACTTACATATGCTCCGGTGGTGATTTCGGCCGGAACCATATTCGCCTCTTAACCGTCACCGAACCTATGTTTCTCTTTTGTTTTATTCACTATAATGCATCTGTGTAGTCCACTACAATTTCCTCTACTATATAGCTTTTCGTGGATCATTATTGTTTTATAGCGCGGCGGACGGTAATGGCGGGAAATTATTCGGTGAACAGTTGCTTGGAGGCCATACTTGACGTTGGGCCTCGACTTGACGATGCCAAAGTGTGCTTCTGCTGAGGGAGAGAGGGCATTTCAGTCCTACTCGAAGGAGGTTATTACTGGTTTCGGAGAGACCGATCTCTATCGCTCTTGGATTTGAGTACGAAAGTTTGATTACTGTTCTTCTTTTGTTTGTTTAGAGGAGGTTTTTTAATGTAAATTCTTCTTCTCGTCGATTTAGGCTGCGGCTACGAGGAGTCCGCAGGAGAGGAACACGAGGCTGGAGGATTTGGAATTTGGCGCGAAAGAAGAAGTAGGTCTGTTTTCTACATTTCTTCTTTGTTTATTCTGTACTTCCGTGTTCGTCGATTGAAATTTTACAATATGATTGATTACCATGTGTACGATTTAACTCTTGCTGCGGTAGACGAATGCACTTGTGTTTCTGAAAGGATAATAGATGAAATCGGAGTTGTGTGA

mRNA sequence

ATGAAACTGAATCACCAATTTCTTCCAGACGCCTGGACATATTGCGAAATTCTTGTCGTTGTAGTCGATTTCTTTCAACAAATCAAATCAACTTACATATGCTCCGGTGGTGATTTCGGCCGGAACCATATTCGCCTCTTAACCGTCACCGAACCTATGCCATACTTGACGTTGGGCCTCGACTTGACGATGCCAAAGTGTGCTTCTGCTGAGGGAGAGAGGGCATTTCAGTCCTACTCGAAGGAGGTTATTACTGGCTGCGGCTACGAGGAGTCCGCAGGAGAGGAACACGAGGCTGGAGGATTTGGAATTTGGCGCGAAAGAAGAAGTAGGTCTGTTTTCTACATTTCTTCTTTGTTTATTCTGTACTTCCGTGTTCGTCGATTGAAATTTTACAATATGATTGATTACCATGTGTACGATTTAACTCTTGCTGCGGTAGACGAATGCACTTGTGTTTCTGAAAGGATAATAGATGAAATCGGAGTTGTGTGA

Coding sequence (CDS)

ATGAAACTGAATCACCAATTTCTTCCAGACGCCTGGACATATTGCGAAATTCTTGTCGTTGTAGTCGATTTCTTTCAACAAATCAAATCAACTTACATATGCTCCGGTGGTGATTTCGGCCGGAACCATATTCGCCTCTTAACCGTCACCGAACCTATGCCATACTTGACGTTGGGCCTCGACTTGACGATGCCAAAGTGTGCTTCTGCTGAGGGAGAGAGGGCATTTCAGTCCTACTCGAAGGAGGTTATTACTGGCTGCGGCTACGAGGAGTCCGCAGGAGAGGAACACGAGGCTGGAGGATTTGGAATTTGGCGCGAAAGAAGAAGTAGGTCTGTTTTCTACATTTCTTCTTTGTTTATTCTGTACTTCCGTGTTCGTCGATTGAAATTTTACAATATGATTGATTACCATGTGTACGATTTAACTCTTGCTGCGGTAGACGAATGCACTTGTGTTTCTGAAAGGATAATAGATGAAATCGGAGTTGTGTGA

Protein sequence

MKLNHQFLPDAWTYCEILVVVVDFFQQIKSTYICSGGDFGRNHIRLLTVTEPMPYLTLGLDLTMPKCASAEGERAFQSYSKEVITGCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFILYFRVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV*
Homology
[Close]
BLAST of CSPI03G43800 vs. ExPASy TrEMBL
Match: A0A0A0LJ93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G876040 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.1e-47
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0 

Query: 64  MPKCASAEGERAFQSYSKEVIT--GCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFI 123
           MPKCASAEGERAFQSYSKEVIT  GCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFI
Sbjct: 1   MPKCASAEGERAFQSYSKEVITGSGCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFI 60

Query: 124 LYFRVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 165
           LYF VRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 61  LYFSVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 103

[Close]
BLAST of CSPI03G43800 vs. ExPASy TrEMBL
Match: A0A5A7VCK5 (Putative sucrose-phosphate synthase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001550 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 7.5e-41
Identity = 95/114 (83.33%), Postives = 97/114 (85.09%), Query Frame = 0 

Query: 55  YLTLGLDL--TMPKCASAEGERAFQSYSKEVIT--GCGYEESAGEEHEAGGFGIWRERRS 114
           YL   LD+   M   ASAEGERAFQSYSKEVI   GCGY ESAGEEHEAGGFG W ERRS
Sbjct: 10  YLEAILDVGPPMQSVASAEGERAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRS 69

Query: 115 RSVFYISSLFILYFRVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 165
           RSVFYISSLFILYF VRRLKFYNMIDY +YDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 70  RSVFYISSLFILYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 123

[Close]
BLAST of CSPI03G43800 vs. ExPASy TrEMBL
Match: A0A5D3E6K3 (Putative sucrose-phosphate synthase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007620 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.7e-40
Identity = 94/114 (82.46%), Postives = 97/114 (85.09%), Query Frame = 0 

Query: 55  YLTLGLDL--TMPKCASAEGERAFQSYSKEVIT--GCGYEESAGEEHEAGGFGIWRERRS 114
           YL   LD+   M   ASAEGE+AFQSYSKEVI   GCGY ESAGEEHEAGGFG W ERRS
Sbjct: 10  YLEAILDVGPPMQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRS 69

Query: 115 RSVFYISSLFILYFRVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 165
           RSVFYISSLFILYF VRRLKFYNMIDY +YDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 70  RSVFYISSLFILYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 123

[Close]
BLAST of CSPI03G43800 vs. NCBI nr
Match: KGN60081.1 (hypothetical protein Csa_002220 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 8.5e-47
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0 

Query: 64  MPKCASAEGERAFQSYSKEVIT--GCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFI 123
           MPKCASAEGERAFQSYSKEVIT  GCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFI
Sbjct: 1   MPKCASAEGERAFQSYSKEVITGSGCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFI 60

Query: 124 LYFRVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 165
           LYF VRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 61  LYFSVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 103

[Close]
BLAST of CSPI03G43800 vs. NCBI nr
Match: KAA0063329.1 (putative sucrose-phosphate synthase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40
Identity = 95/114 (83.33%), Postives = 97/114 (85.09%), Query Frame = 0 

Query: 55  YLTLGLDL--TMPKCASAEGERAFQSYSKEVIT--GCGYEESAGEEHEAGGFGIWRERRS 114
           YL   LD+   M   ASAEGERAFQSYSKEVI   GCGY ESAGEEHEAGGFG W ERRS
Sbjct: 10  YLEAILDVGPPMQSVASAEGERAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRS 69

Query: 115 RSVFYISSLFILYFRVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 165
           RSVFYISSLFILYF VRRLKFYNMIDY +YDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 70  RSVFYISSLFILYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 123

[Close]
BLAST of CSPI03G43800 vs. NCBI nr
Match: TYK31448.1 (putative sucrose-phosphate synthase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 175.6 bits (444), Expect = 3.4e-40
Identity = 94/114 (82.46%), Postives = 97/114 (85.09%), Query Frame = 0 

Query: 55  YLTLGLDL--TMPKCASAEGERAFQSYSKEVIT--GCGYEESAGEEHEAGGFGIWRERRS 114
           YL   LD+   M   ASAEGE+AFQSYSKEVI   GCGY ESAGEEHEAGGFG W ERRS
Sbjct: 10  YLEAILDVGPPMQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRS 69

Query: 115 RSVFYISSLFILYFRVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 165
           RSVFYISSLFILYF VRRLKFYNMIDY +YDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 70  RSVFYISSLFILYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 123

The following BLAST results are available for this feature:
BLAST of CSPI03G43800 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G43800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ934.1e-4797.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G876040 PE=4 SV=1[more]
A0A5A7VCK57.5e-4183.33Putative sucrose-phosphate synthase isoform X2 OS=Cucumis melo var. makuwa OX=11... [more]
A0A5D3E6K31.7e-4082.46Putative sucrose-phosphate synthase isoform X2 OS=Cucumis melo var. makuwa OX=11... [more]
BLAST of CSPI03G43800 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60081.18.5e-4797.09hypothetical protein Csa_002220 [Cucumis sativus][more]
KAA0063329.11.5e-4083.33putative sucrose-phosphate synthase isoform X2 [Cucumis melo var. makuwa][more]
TYK31448.13.4e-4082.46putative sucrose-phosphate synthase isoform X2 [Cucumis melo var. makuwa][more]
BLAST of CSPI03G43800 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G43800.1CSPI03G43800.1mRNA