CSPI03G43360 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G43360
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr3: 37284949 .. 37285472 (+)
RNA-Seq Expression	CSPI03G43360
Synteny	CSPI03G43360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGGCCTAAAACTAGTGCAGCCCTTATCACTGCTGTTTCTTCTTCTTCTTCTTCTTCTAACTCTCTGAACTTCTCTTCCATGAAGCTGTTTCAACGAATCCGTAAGATGCTCGTACGGTTCGTCTTTTCTATCCCATCTCGAGTGTCATCATCGTCGAGACGAAGAACAAGCTATGACAAGTCGTTTGATCCACCAAAAACGTCGTGTAGCTCTTATTACTCTTCTCATTCCCACTATGATGAGGCCATTGCCGATTGTATTGAGTTTTTCAACAAGTCGTCGCAAGATAGGGGTTTTGAAGATCAAAAACCAATCACTAATTTGATGTGATATATACTGAGAGTACACCAACAAATTAAAATATCGTCCCATAGTGGACAATATGTCAAACCATGGTAGAAATATGAAGAAAAGTTTGTTAATCTCGATCGATCGAAAAAATTTGGTTTGTCCTTTGATTTTTATGTGTTGTTTATTCTTGTATTTATATCTATCTTTTTATTTAAGGGCTCCGAACG

mRNA sequence

ATGCAAAGGCCTAAAACTAGTGCAGCCCTTATCACTGCTGTTTCTTCTTCTTCTTCTTCTTCTAACTCTCTGAACTTCTCTTCCATGAAGCTGTTTCAACGAATCCGTAAGATGCTCGTACGGTTCGTCTTTTCTATCCCATCTCGAGTGTCATCATCGTCGAGACGAAGAACAAGCTATGACAAGTCGTTTGATCCACCAAAAACGTCGTGTAGCTCTTATTACTCTTCTCATTCCCACTATGATGAGGCCATTGCCGATTGTATTGAGTTTTTCAACAAGTCGTCGCAAGATAGGGGTTTTGAAGATCAAAAACCAATCACTAATTTGATGTGATATATACTGAGAGTACACCAACAAATTAAAATATCGTCCCATAGTGGACAATATGTCAAACCATGGTAGAAATATGAAGAAAAGTTTGTTAATCTCGATCGATCGAAAAAATTTGGTTTGTCCTTTGATTTTTATGTGTTGTTTATTCTTGTATTTATATCTATCTTTTTATTTAAGGGCTCCGAACG

Coding sequence (CDS)

ATGCAAAGGCCTAAAACTAGTGCAGCCCTTATCACTGCTGTTTCTTCTTCTTCTTCTTCTTCTAACTCTCTGAACTTCTCTTCCATGAAGCTGTTTCAACGAATCCGTAAGATGCTCGTACGGTTCGTCTTTTCTATCCCATCTCGAGTGTCATCATCGTCGAGACGAAGAACAAGCTATGACAAGTCGTTTGATCCACCAAAAACGTCGTGTAGCTCTTATTACTCTTCTCATTCCCACTATGATGAGGCCATTGCCGATTGTATTGAGTTTTTCAACAAGTCGTCGCAAGATAGGGGTTTTGAAGATCAAAAACCAATCACTAATTTGATGTGA

Protein sequence

MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM*

Homology

[Close]

BLAST of CSPI03G43360 vs. ExPASy TrEMBL
Match: A0A0A0LDK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872120 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.4e-51
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60
           MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY
Sbjct: 1   MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60

Query: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM 112
           DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM
Sbjct: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM 111

[Close]

BLAST of CSPI03G43360 vs. ExPASy TrEMBL
Match: A0A6P6FUZ0 (uncharacterized protein LOC107408298 OS=Ziziphus jujuba OX=326968 GN=LOC107408298 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 59/104 (56.73%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 12  TAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSR----------RRTSYD 71
           T  +S+++++  LN S+MKLF R RK+L+R +FS+P R S SS           R+ + D
Sbjct: 31  TTGTSTTTTTTKLNLSAMKLFNRFRKILMRLIFSLPPRGSCSSSSSSATPGMTPRQRNCD 90

Query: 72  KSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQK 106
           +SFDPPKTSCSSYYSSHSHY+EAIADCIEFFNKSSQ+ G + +K
Sbjct: 91  RSFDPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSQEGGLDGRK 134

[Close]

BLAST of CSPI03G43360 vs. ExPASy TrEMBL
Match: A0A371F207 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_48306 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.4e-20
Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 24  LNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDE 83
           LN S+MKLFQR RK+L+R VFS+PSR SS SR + S    F+PPKTSCSSYYSS+SHY+E
Sbjct: 35  LNLSAMKLFQRFRKILMRLVFSVPSRRSSDSRHKVS--DRFEPPKTSCSSYYSSYSHYNE 94

Query: 84  AIADCIEFFNKSSQDRGFEDQK 106
           AIADCIEFFNKS+QD   + +K
Sbjct: 95  AIADCIEFFNKSAQDGVLDARK 114

[Close]

BLAST of CSPI03G43360 vs. ExPASy TrEMBL
Match: A0A1J7GSL2 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_30955 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-19
Identity = 59/87 (67.82%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 20  SSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSS---SRRRTSYDKSFDPPKTSCSSYYS 79
           SS   NFS+MKLF R RK+L+R +F+IPS  SSS   SR+R S+D+ F+PPKTSCSSYYS
Sbjct: 47  SSIKFNFSAMKLFHRFRKVLMRLMFTIPSPKSSSSDHSRQRNSHDR-FEPPKTSCSSYYS 106

Query: 80  SHSHYDEAIADCIEFFNKSSQDRGFED 104
           S+SHY+EAI+DCIEFFNKS+QD GF D
Sbjct: 107 SYSHYNEAISDCIEFFNKSAQD-GFSD 131

[Close]

BLAST of CSPI03G43360 vs. ExPASy TrEMBL
Match: A0A6A4PF73 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr14g0369841 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.9e-19
Identity = 57/82 (69.51%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 25  NFSSMKLFQRIRKMLVRFVFSIPSRVSSS---SRRRTSYDKSFDPPKTSCSSYYSSHSHY 84
           NFS+MK+F R RK+L+R VF+IPS  SSS   SR+R S+D+ F+PPKTSCSSYYSS+SHY
Sbjct: 77  NFSAMKIFHRFRKVLMRLVFTIPSHRSSSSDHSRQRNSHDR-FEPPKTSCSSYYSSYSHY 136

Query: 85  DEAIADCIEFFNKSSQDRGFED 104
           +EAI+DCIEFFNKS+QD GF D
Sbjct: 137 NEAISDCIEFFNKSAQD-GFSD 156

[Close]

BLAST of CSPI03G43360 vs. NCBI nr
Match: KGN60030.1 (hypothetical protein Csa_001336 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60
           MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY
Sbjct: 1   MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60

Query: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM 112
           DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM
Sbjct: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM 111

[Close]

BLAST of CSPI03G43360 vs. NCBI nr
Match: KAG7024157.1 (hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 29 MKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADC 88
          MKLF RIRK+LVRFVFS+PSRV  SSR+RT+YDK +DPPKTSCSSYYSSHSHYDEAIADC
Sbjct: 1  MKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADC 60

Query: 89 IEFFNKSSQD 99
          IEFFNKSSQD
Sbjct: 61 IEFFNKSSQD 68

[Close]

BLAST of CSPI03G43360 vs. NCBI nr
Match: XP_024925739.1 (uncharacterized protein LOC107408298 [Ziziphus jujuba])

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-20
Identity = 59/104 (56.73%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 12  TAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSR----------RRTSYD 71
           T  +S+++++  LN S+MKLF R RK+L+R +FS+P R S SS           R+ + D
Sbjct: 31  TTGTSTTTTTTKLNLSAMKLFNRFRKILMRLIFSLPPRGSCSSSSSSATPGMTPRQRNCD 90

Query: 72  KSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQK 106
           +SFDPPKTSCSSYYSSHSHY+EAIADCIEFFNKSSQ+ G + +K
Sbjct: 91  RSFDPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSQEGGLDGRK 134

[Close]

BLAST of CSPI03G43360 vs. NCBI nr
Match: XP_020218596.2 (uncharacterized protein LOC109801863 [Cajanus cajan])

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20
Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 0


Query: 24  LNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDE 83
           LN S+MKLFQR RK+L+RFVFS+PSR SS SR + S    F+PPKTSCSSYYSS+SHY+E
Sbjct: 47  LNLSAMKLFQRFRKILMRFVFSVPSRRSSDSRHKVS--DRFEPPKTSCSSYYSSYSHYNE 106

Query: 84  AIADCIEFFNKSSQDRGFEDQK 106
           AIADCIEFFNKS+QD   + +K
Sbjct: 107 AIADCIEFFNKSAQDGVLDGRK 126

[Close]

BLAST of CSPI03G43360 vs. NCBI nr
Match: RDX72233.1 (hypothetical protein CR513_48306, partial [Mucuna pruriens])

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-19
Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 24  LNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDE 83
           LN S+MKLFQR RK+L+R VFS+PSR SS SR + S    F+PPKTSCSSYYSS+SHY+E
Sbjct: 35  LNLSAMKLFQRFRKILMRLVFSVPSRRSSDSRHKVS--DRFEPPKTSCSSYYSSYSHYNE 94

Query: 84  AIADCIEFFNKSSQDRGFEDQK 106
           AIADCIEFFNKS+QD   + +K
Sbjct: 95  AIADCIEFFNKSAQDGVLDARK 114

[Close]

BLAST of CSPI03G43360 vs. TAIR 10
Match: AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-12
Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 29 MKLFQRIRKMLVR---FVFSIPSRVSSSSRRRTSYDKSFDPPKTSC-SSYYSSHSHYDEA 88
          MKLF ++ K+L+R   F     SR    +  R+   + F+PPK SC SSYYSSH HY EA
Sbjct: 1  MKLFHKLGKILMRLIDFTLHSSSRRQKKNNSRSGDGERFEPPKISCSSSYYSSHVHYSEA 60

Query: 89 IADCIEFFNKSS 97
          IADCIEFFNKSS
Sbjct: 61 IADCIEFFNKSS 72

The following BLAST results are available for this feature:

BLAST of CSPI03G43360 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G43360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDK4	5.4e-51	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872120 PE=4 SV=1	[more]
A0A6P6FUZ0	1.0e-20	56.73	uncharacterized protein LOC107408298 OS=Ziziphus jujuba OX=326968 GN=LOC10740829...	[more]
A0A371F207	8.4e-20	68.29	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_48306 P...	[more]
A0A1J7GSL2	1.4e-19	67.82	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_30955 PE=4 S...	[more]
A0A6A4PF73	1.9e-19	69.51	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr14g0369841 PE=4 SV=1	[more]

BLAST of CSPI03G43360 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60030.1	1.1e-50	100.00	hypothetical protein Csa_001336 [Cucumis sativus]	[more]
KAG7024157.1	1.5e-23	87.14	hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_024925739.1	2.1e-20	56.73	uncharacterized protein LOC107408298 [Ziziphus jujuba]	[more]
XP_020218596.2	2.7e-20	69.51	uncharacterized protein LOC109801863 [Cajanus cajan]	[more]
RDX72233.1	1.7e-19	68.29	hypothetical protein CR513_48306, partial [Mucuna pruriens]	[more]

BLAST of CSPI03G43360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75717.1	2.2e-12	55.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..70
None	No IPR available	PANTHER	PTHR35111	F10A5.9-RELATED	coord: 1..105
None	No IPR available	PANTHER	PTHR35111:SF5	F10A5.9	coord: 1..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G43360.1	CSPI03G43360.1	mRNA