CSPI03G42210 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCTATAACTCAATTACTACCCCCTCTTTTCTTCTCTTCCTTTTCTTTTCTACATCTTTGTGATGAACACACCATCTTCCTTCCCGGACCTCTCCTTGCAGATCAGCCTTCCGATGTCAACACTGCCATGTGAGGCCAAGGCCACGAAGCCAAGAAGCTCAACCACCATGGATTCGAGTTCCAGTGGCAAAAGTGATTTGAGCCATGAAAGTGGTCTCTTCCACCACCTAGGGTTTGAAGCGGGAGATTTGGAGGTTCCTCCTCGGCGTCCTCACCAAGCAGCTTGTTGTAATGTGCGTGACCACCGCGATTTCAAAAGAAGCGGAGGCAGGGTCGGGTGTGGAGTAAGAAGAAACATCCGAGCTCCAAGAATGAGATGGACTACAACTCTTCATGCTCATTTTGTACATGCCGTTGAGCTTCTTGGTGGCCATGAAAGTAAATTTAATTTACATTACCAAAAATTAATCAATAACCCTAATGGCTAATCATTTAGTTTGTCACTTCATTATCGTTCACACATTCACCTTAAGTAATTATTCTTCAGAACAAATTGTAAAAAATCAAATGCAATAGTGGAAACTTTTATTAATTAATGACCATTTTTTCTCTTTGTATCTCTCTGATTAGGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTTAAGGACCTAACCCTAGCTCACGTCAAAAGCCATTTGCAGGTTGGTTTGGCTTTCTTTAACTTCCGATATTATTTTCTCTATTTTTCCGATTTGGAGAATATAAACAAACAATTTAAAGTCAACCCAAAAACCCATTTAAGACTCTGAGTTTGGATATATAGTTTAACGTCAGGCAAGAAATCCTGATGATGTTATTTCCTCCCCCATTAGCATTTGACGAACAATAATTTAATCTCTGAACAAAGGGTCTTTAATTTCTTTAAATAAAAACAAAAAAATATTCTTTTATATCCCATATTTTTCCTCCCCTTAATAAAACATTTAAATTTTGTTTCCTAAAAAGGTAGGCTTGTTTTCCCCTAATTTCTTTACTATGATTTTCATTTCAGATCTTTAGGTTTGTTAAGACCAAATTCTAGAAACAAAACATATCTAATTTAGTTTCAAACTTTAATTCAACAAACTTTTTTGGCTAATTTTCCAACGACAAATGATTAGGTATAGCTTAGGTGCTTCTAATTTTTTTTATTTTTTGAGCTATGAGAATGTGAATAAATGATTAAAAACATATAGTAATTTAATTTGTGTGGGAGGGTGTAGAGTTGTAGTGTATGATTCTGCATTGAGAAGCACAATGGATGCTCCCTTTCATTTTCCTTTTGGGTTCCCTAGAACTTGATTTTGTCACTTAACATTTATCTTATTCTAGAAAAGTCTTACAATTTTTTTTTGAAGATTCATTAGAATGAGTAAGGTGTAAAAGAGAGAGTACAAAAGTTAAAGGACAAAAAAATGGCATCTAAAAGATCAGCAACTACAAGGAAGAGACTGTTAAAAAAACTAAAACACATTATTTTTTGTTTTTGGTTTTGTTGTTCATGCAGATGTACAGAACAGTGAAAAATACTGTGAAGGAAACAGCAGGTAAATAAATACAAAACACCTTTTCTTTTGATATATACATTTGTATATATGTGGACATTATTATTCTCAAATCCGTATATTTTACATACACTGTTAGTTTTGTTTGTACCAGTTTATATACAAAAAAAAATGAAATTGAAATTCCTTTGAGAACTGATCAAGATGGGTTTTTTTTTTTTTTTTTTGGTAAATTGTAAATATTTTGTATAGATGATTGTGGAAGGCCTGAGGTTGAAGAAGATGGGATGGTTTTATCTTCTTGTGTTAAAAAATCTAACTTTGGATCAAATCATTTCCAGAGAATCCAAAGGTATGATATATCTATCTATGCTTTTAATTACTTCTACATTTGAAAAGTGATTTCACAACAGTTTTTCTACTCTCTCTTTTCTCAAATCCTCACTTTTTTCAATGCTTAAAAATTTTCAAGCTATTTAAAATTTGTATATATCATCATCTTTTTAACAGTTGCAAAGAGCTTGACATTAACACAAACTTTTATTGTGTGGACTTAAATACCCTCAAGATTGATTCCAATCTCTTATGCTAATAATATAATAAAAAGAAAATTAAAGTTAAGATGATGGTTAAAAAATTTAACAGGTTTAATTAGCATTCCATATTGGTATGTTGGAACCAGTGTGTGATGAACACCTCAAATAAATAATCATAAAATAGAATCTTTAAAACTTATTTATTTAGAAGATAACTTTTTTTTGTGTATATTCTTATTCAAACTTAGATGTTTTACAATACACCATTGTATTGTATAAATCTATTAGCTCTCCTTATAATACAATTAATAAATCCTATATTTAATTTATTAACTTAATGAACTCTCAAATACCACATTTGATCAACTCTCTCATCAATGTGTTATGCTTAATTAATTAACTTTCTCAACTCTCATCAATCTAGTTGTTATAAACGTAAGGTTATGGACAAAATGATGATGAGGAGGGTATAAGCTTGGACTTTGTGATTATGTAGGTAGTTTATGGTCTTAATTTAAAATCACTACAAATTCAAAATTTTAATTTATATTCATATATTTGAACTTCTTGTTGCGTGCAGAAGTAGTTTGGTAACATCAATGCACAACAGTTGCCACAGAACCAAGTCAAACGCCGAAGCTTTCGCTAAATCTAGAGGAATTAAGGTAATACATCATTATTCAAAATAATTTTTTTATTATTATTATTCAATACTTTCAATTAGAGAATATTTATAAATATAACAAAACATTTTGAAAACAACTCATGAAAATGGTTATTAGGTGTAAAATGCTGTCTTTCTTTACAAAAATTTAAAAAACCAAGCCTCAAATTAAAGTATATACAATTAATCATTATTTTTTTAAAAAATTGAGTTATATTATAAAGTTATTTTTTATTTAATAAATATTATAGGTTGAAGGAAGCAATGGGGATTATCAGGAGGCAATTACAATGGAGAGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTTTGGTGATTCAAAGAAGCTTGCCCTTCTCAATTGCTAATTTTCTAAATTTCCAATCCAAAAATGAAAAAGAAAGAGAAAAAAAAAAGTTAAGAAGCTAGAGAGAAAAATCTCCTGAGTTTAGTCTATTTTACTCATGC TCCCTATAACTCAATTACTACCCCCTCTTTTCTTCTCTTCCTTTTCTTTTCTACATCTTTGTGATGAACACACCATCTTCCTTCCCGGACCTCTCCTTGCAGATCAGCCTTCCGATGTCAACACTGCCATGTGAGGCCAAGGCCACGAAGCCAAGAAGCTCAACCACCATGGATTCGAGTTCCAGTGGCAAAAGTGATTTGAGCCATGAAAGTGGTCTCTTCCACCACCTAGGGTTTGAAGCGGGAGATTTGGAGGTTCCTCCTCGGCGTCCTCACCAAGCAGCTTGTTGTAATGTGCGTGACCACCGCGATTTCAAAAGAAGCGGAGGCAGGGTCGGGTGTGGAGTAAGAAGAAACATCCGAGCTCCAAGAATGAGATGGACTACAACTCTTCATGCTCATTTTGTACATGCCGTTGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTTAAGGACCTAACCCTAGCTCACGTCAAAAGCCATTTGCAGATGTACAGAACAGTGAAAAATACTGTGAAGGAAACAGCAGATGATTGTGGAAGGCCTGAGGTTGAAGAAGATGGGATGGTTTTATCTTCTTGTGTTAAAAAATCTAACTTTGGATCAAATCATTTCCAGAGAATCCAAAGAAGTAGTTTGGTAACATCAATGCACAACAGTTGCCACAGAACCAAGTCAAACGCCGAAGCTTTCGCTAAATCTAGAGGAATTAAGGTTGAAGGAAGCAATGGGGATTATCAGGAGGCAATTACAATGGAGAGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTTTGGTGATTCAAAGAAGCTTGCCCTTCTCAATTGCTAATTTTCTAAATTTCCAATCCAAAAATGAAAAAGAAAGAGAAAAAAAAAAGTTAAGAAGCTAGAGAGAAAAATCTCCTGAGTTTAGTCTATTTTACTCATGC ATGAACACACCATCTTCCTTCCCGGACCTCTCCTTGCAGATCAGCCTTCCGATGTCAACACTGCCATGTGAGGCCAAGGCCACGAAGCCAAGAAGCTCAACCACCATGGATTCGAGTTCCAGTGGCAAAAGTGATTTGAGCCATGAAAGTGGTCTCTTCCACCACCTAGGGTTTGAAGCGGGAGATTTGGAGGTTCCTCCTCGGCGTCCTCACCAAGCAGCTTGTTGTAATGTGCGTGACCACCGCGATTTCAAAAGAAGCGGAGGCAGGGTCGGGTGTGGAGTAAGAAGAAACATCCGAGCTCCAAGAATGAGATGGACTACAACTCTTCATGCTCATTTTGTACATGCCGTTGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTTAAGGACCTAACCCTAGCTCACGTCAAAAGCCATTTGCAGATGTACAGAACAGTGAAAAATACTGTGAAGGAAACAGCAGATGATTGTGGAAGGCCTGAGGTTGAAGAAGATGGGATGGTTTTATCTTCTTGTGTTAAAAAATCTAACTTTGGATCAAATCATTTCCAGAGAATCCAAAGAAGTAGTTTGGTAACATCAATGCACAACAGTTGCCACAGAACCAAGTCAAACGCCGAAGCTTTCGCTAAATCTAGAGGAATTAAGGTTGAAGGAAGCAATGGGGATTATCAGGAGGCAATTACAATGGAGAGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTTTGGTGATTCAAAGAAGCTTGCCCTTCTCAATTGCTAA MNTPSSFPDLSLQISLPMSTLPCEAKATKPRSSTTMDSSSSGKSDLSHESGLFHHLGFEAGDLEVPPRRPHQAACCNVRDHRDFKRSGGRVGCGVRRNIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKETADDCGRPEVEEDGMVLSSCVKKSNFGSNHFQRIQRSSLVTSMHNSCHRTKSNAEAFAKSRGIKVEGSNGDYQEAITMERINLEFTLGRPSWQLDFGDSKKLALLNC* Homology
BLAST of CSPI03G42210 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.3e-43 Identity = 129/290 (44.48%), Postives = 163/290 (56.21%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28 Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.1e-28 Identity = 76/162 (46.91%), Postives = 96/162 (59.26%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.6e-27 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 5.7e-27 Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy TrEMBL
Match: A0A0A0LFY8 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852530 PE=4 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 3.8e-151 Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy TrEMBL
Match: A0A5A7UT98 (Putative transcription factor KAN4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1312G00080 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 9.1e-137 Identity = 250/269 (92.94%), Postives = 256/269 (95.17%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy TrEMBL
Match: A0A1S3C0D9 (probable transcription factor KAN4 OS=Cucumis melo OX=3656 GN=LOC103495027 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 9.1e-137 Identity = 250/269 (92.94%), Postives = 256/269 (95.17%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy TrEMBL
Match: A0A6J1IEP7 (probable transcription factor KAN4 OS=Cucurbita maxima OX=3661 GN=LOC111476566 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 4.7e-93 Identity = 196/278 (70.50%), Postives = 214/278 (76.98%), Query Frame = 0
BLAST of CSPI03G42210 vs. ExPASy TrEMBL
Match: A0A6J1F986 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111443475 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 3.1e-92 Identity = 194/277 (70.04%), Postives = 212/277 (76.53%), Query Frame = 0
BLAST of CSPI03G42210 vs. NCBI nr
Match: XP_011652394.1 (probable transcription factor KAN4 [Cucumis sativus] >KGN59904.1 hypothetical protein Csa_001648 [Cucumis sativus]) HSP 1 Score: 543.9 bits (1400), Expect = 7.9e-151 Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of CSPI03G42210 vs. NCBI nr
Match: XP_008454673.1 (PREDICTED: probable transcription factor KAN4 [Cucumis melo] >KAA0056721.1 putative transcription factor KAN4 [Cucumis melo var. makuwa] >TYK21185.1 putative transcription factor KAN4 [Cucumis melo var. makuwa]) HSP 1 Score: 496.1 bits (1276), Expect = 1.9e-136 Identity = 250/269 (92.94%), Postives = 256/269 (95.17%), Query Frame = 0
BLAST of CSPI03G42210 vs. NCBI nr
Match: XP_038896529.1 (probable transcription factor KAN4 [Benincasa hispida]) HSP 1 Score: 419.1 bits (1076), Expect = 2.9e-113 Identity = 225/274 (82.12%), Postives = 236/274 (86.13%), Query Frame = 0
BLAST of CSPI03G42210 vs. NCBI nr
Match: XP_023535459.1 (probable transcription factor KAN4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 359.0 bits (920), Expect = 3.6e-95 Identity = 197/277 (71.12%), Postives = 216/277 (77.98%), Query Frame = 0
BLAST of CSPI03G42210 vs. NCBI nr
Match: KAG6591346.1 (putative transcription factor KAN4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 355.1 bits (910), Expect = 5.2e-94 Identity = 195/277 (70.40%), Postives = 214/277 (77.26%), Query Frame = 0
BLAST of CSPI03G42210 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 176.8 bits (447), Expect = 2.4e-44 Identity = 129/290 (44.48%), Postives = 163/290 (56.21%), Query Frame = 0
BLAST of CSPI03G42210 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 156.4 bits (394), Expect = 3.3e-38 Identity = 105/187 (56.15%), Postives = 121/187 (64.71%), Query Frame = 0
BLAST of CSPI03G42210 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29 Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of CSPI03G42210 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 126.3 bits (316), Expect = 3.7e-29 Identity = 76/162 (46.91%), Postives = 96/162 (59.26%), Query Frame = 0
BLAST of CSPI03G42210 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 124.0 bits (310), Expect = 1.8e-28 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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