CSPI03G41880 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCACGAACGCCTTCTTTTGGCTGTCAACACTCATTCTACGTCCCCCACGTGTCTACCCCCTTCCATTTCCACCCATATTCCCTTCTTCTCCTCCTCCTCCTCCTTCTCCTCCTATTTACATTTCTCTCTCCATTCCCCCTTTCTCTCCGCCACCCCCCTCTTTAATGTGATTCTCTTCATTCATCCACCCATGGCCGTTGCCCACCGCCACAAGTCACACCCCGATGTCAAGCTCTTCAGGCTCTGTCCCATTTGGCAATCTGGGAATACTCATTCCTCTTCCTCCTCCTCCACTCACAACCTTCACCATCCTACTCATCCCCCTAGCGACACAAACCTGAAAGCTTCCTCCTCTTCTAAGACCGTTTCCTCTGTCGCCAAGTCTCTCTTGCCTCCTCGACGCAGGCTCCGTCTTGATCCTAACAATTCTTTGTTCTTTCCTTGTAAGTTCTTCTCCTTTCCAGTTGTTTAGATTTCTATATATCCAGTGGACAGGTGTTTCGATGTTTTATTTTTATTTTTATTTATTATATTGCTTTATTTATAATTTTAAATTGGCTGTTTCAAACTCGAGAAAGTGGATGATAATCTTCTATCTGGATAATGCGAGTCGAAACCATACTCGTTTTCTTTTGGATTAGAATATTTAGCTTTTCTGTATTGAATTAAATAATGCTCCTACTCTTCATTCGGATTTTCCTGCTACCATTTGCAACTTGAAGCAGGGGAAACTGTACGGAATTATTGTTTAGATTACAAGCAGCAGCTAAATAGAGTTCTGTTTTGTTTAACTCTGTTTCGTTTGATGGGGTGTTTTTTTTTCCCCCTATAGATGAACCCGGGAAGCAGGTAAAGAGCGCCATCAGGATGAAGAATACAAGCAGATCCCATGTAGCTTTCAAGGTATTACTTTAATTATATTTCCATTGCAGGCCTACTTTCACTTTTTGTTCTTTCAATTATTCTTATATTGATTTCTTACTTCTTAAGTCCCAACAAGCCAAGCGTACGGAAAACGCTTAACTCAAAAATCAATGCATGTGATTCTGTTCTTCCATGTACTTTTCTCAAATTCCATGCATGTTAATTATTGTTCTTTTTTCTCGGGTAATTATTGTTTTTGGGAACTTTATTAAAGGATAAAAGTTTGTTTCAGCGAATCCATCTAAAAATTTGTTTCTTAGTATATTTTGTCCGGGGAATCTGCTTCATCATCCTAATCCGTGAAAATTTGTATTCAAAATTGTATTCAGCTTCTTGTGAAGTTGTGTTAAGAACCAAGGTAGTATGGGATGCCTTTGTCTCACGTTGGTTAGAATGGGATGACCAATTTAGTACTTAACTGGCTTGACTCTCCCACCCCCAACAACTGGCTTTTGGGGTGTCGTTCTCCAAAGTGCTTAAGTACCTGACAATGGTATCATATTCAGTTGTTGACATTTCAAAGTGGAACCGGTGGAAGGTTTTGGTTGGGTGTGGCCATCTGAAGTATCATCGGGACATCAACTTTTCCAGAAAAGGGGTATTGTTAGGAACCAAGGCAGTATTATAGGATACCTTTGTCCCACGAAGGTTTTATCCGATGATGGGTATGATTTTATATCAATCACTCTTCATTTTTCTTTCTTCGAAGAATCATTATAAGTTTTAACTAATTCTTCAATTAGATCGTTGGAGTTATTGTGTAATTACTCTAGGTTTTGATTTCCCTATCTACATTACCAGCAAGTCAGGTAAAGGCTGGTGAACTGCCTACTTGTTTGAATCTCATTTCAAACCAATGTGAAATCTTCATCTCTATGATTAATTAATTAGAATGTGAGTAAATCATTCTAAATGGTCTCTGCGTTTTTTCTTCAGTTTCAAACGACAGCTCCGAAGAGCTGTTATATGCGGCCTCCTGGTGGCATTCTTGCTCCTGGAGAAAATTTTATTGCTACTGGTAATGTTTCGGTTGTCATGTCCTTTCTCTTTTTCCTGTTGAACAGTTTTTGCGTGTGGGTAATGATAGTATTTTCAATTCATAAGTGTACTTTCATTTCTCCCTTTTCATGGTTTTCTTACTTTAAATGTAATGGTATGTGACCAACATCAACGCAAGTTCTCATTTGTTTCATCTCTTAAACAGTCTTCAGATTTGTAGAGCATCCCGAGAACAATGAAAAGCCAATGGACCAGAAGAGCAAAATTAAGTTTAAGATCATGAGCCTTAAAGTGAAAGGAGGAACGGAATATGCACCTGAGCTGGTGAGTGTCAGTTTAAATTAGGATTCCGACTTTCCATGTCTCCCTCTATGCTACTTTGGTTTCTTAAACGTAAACTTCTCTGGCTTTCCATTATGAAAGATAGCCCATGTTTTTTCCATTTTTGTTATTTTTTTGTGTATTATTTGACAGCTTAAAAGTTTCCGTTGTGCTAGCTTGCACTTCTTTTAGTTACCTCCATGTTGCCAATGTTGTTTAGTGTGATATTTTTTGTCAAACAGCATCTCCAGTTTGTAGGTTCTATTTTCATCTAAATCAGCGCACTAAACTGCAATGGACATTTCTTCGGTGGTAGAAGCTGAAATAAGCTAATAAGTTTGTTTGTGATTATTTGAAGTTGTATGGTAGTACTTTCATTTATTACCTCACCTCAAGAAGTCAACTTTGGTTCACATTTGTGTTCAACCAATGAATGAATGATACATTGTGAAATTTTGAATCTGTTGCCAAACTTGTTGATGGCATGTATTTATGTTCTGCAAAATTTTCAGTTTGAAGAACAGAAGGACCAAGTCACTGTTGAGCGGATTTTGCGGGTTGTATTTGTAGATCCAGAGCGACCTAGTGCAGTAAGTGAATTAATGAACCCAGTGCTTGGTCTTGTCTATATTGGAGAGGGAGGTCTCATTTAACTACATGTTGATATTTTAGGCTCTTGAAAAGCTGAAACGTCAATTGGCTGAAGCCGAGGCTGTACTTGAAGCGCGCAAGAAACCTCCAGTAGAAACAGGTCCTCAGGTTATAGGGGGTGAAGGGCTTGTGATAGATGAATGGGTACGTTGATCTTGATCTGGAGTGTTTAAGTTCTTATATATTCGTATGTCGATCTGATGAACTCTTGTTAACTCTATGATCTTCATTTTTGGATTGTTCAGAAAGAACGAAGGGAGAAATATCTTGCTCGTCAACAAGTGGGTGCTTTAGACTCTGTGTAAAGTTCGATTTACTGTTGCATTGCACTACACTCTTTTCGGTGGTAAATCTGTACAGGTATTCTCATCTTCCAAGCCCTGGATATCTAGAAGGTAAAAGGAGTTGTTGGTTGGAAAGTTCATCTGAGAGGGAAAAAAAAAAGAATAAAAACCAATGTCGACTCCACTACTCATGAAATGTGCAGCGCGTAATTTGGAGAACTTTGATTGAAAGTCAATGGCTGCTCGTTGTAGATAACGAATTTTGCTTGTGAGAATAAATGTACTACATATCAATCACCTCAGTTATGATTATAAGATAAATATAATATGGTTTCTTGGTTGGAATTGATCAGTTTAACTTTTGGATAGATAAGTTGTGTACTTATTTTGGTGAAGGACAGAATTTCCACAAATCCCATAATTTTTTAGCTTAAAATTGGGTGCTGCTTCTCTTATTCAAT GCACGAACGCCTTCTTTTGGCTGTCAACACTCATTCTACGTCCCCCACGTGTCTACCCCCTTCCATTTCCACCCATATTCCCTTCTTCTCCTCCTCCTCCTCCTTCTCCTCCTATTTACATTTCTCTCTCCATTCCCCCTTTCTCTCCGCCACCCCCCTCTTTAATGTGATTCTCTTCATTCATCCACCCATGGCCGTTGCCCACCGCCACAAGTCACACCCCGATGTCAAGCTCTTCAGGCTCTGTCCCATTTGGCAATCTGGGAATACTCATTCCTCTTCCTCCTCCTCCACTCACAACCTTCACCATCCTACTCATCCCCCTAGCGACACAAACCTGAAAGCTTCCTCCTCTTCTAAGACCGTTTCCTCTGTCGCCAAGTCTCTCTTGCCTCCTCGACGCAGGCTCCGTCTTGATCCTAACAATTCTTTGTTCTTTCCTTATGAACCCGGGAAGCAGGTAAAGAGCGCCATCAGGATGAAGAATACAAGCAGATCCCATGTAGCTTTCAAGTTTCAAACGACAGCTCCGAAGAGCTGTTATATGCGGCCTCCTGGTGGCATTCTTGCTCCTGGAGAAAATTTTATTGCTACTGTCTTCAGATTTGTAGAGCATCCCGAGAACAATGAAAAGCCAATGGACCAGAAGAGCAAAATTAAGTTTAAGATCATGAGCCTTAAAGTGAAAGGAGGAACGGAATATGCACCTGAGCTGTTTGAAGAACAGAAGGACCAAGTCACTGTTGAGCGGATTTTGCGGGTTGTATTTGTAGATCCAGAGCGACCTAGTGCAGCTCTTGAAAAGCTGAAACGTCAATTGGCTGAAGCCGAGGCTGTACTTGAAGCGCGCAAGAAACCTCCAGTAGAAACAGGTCCTCAGGTTATAGGGGGTGAAGGGCTTGTGATAGATGAATGGAAAGAACGAAGGGAGAAATATCTTGCTCGTCAACAAGTGGGTGCTTTAGACTCTGTGTAAAGTTCGATTTACTGTTGCATTGCACTACACTCTTTTCGGTGGTAAATCTGTACAGGTATTCTCATCTTCCAAGCCCTGGATATCTAGAAGGTAAAAGGAGTTGTTGGTTGGAAAGTTCATCTGAGAGGGAAAAAAAAAAGAATAAAAACCAATGTCGACTCCACTACTCATGAAATGTGCAGCGCGTAATTTGGAGAACTTTGATTGAAAGTCAATGGCTGCTCGTTGTAGATAACGAATTTTGCTTGTGAGAATAAATGTACTACATATCAATCACCTCAGTTATGATTATAAGATAAATATAATATGGTTTCTTGGTTGGAATTGATCAGTTTAACTTTTGGATAGATAAGTTGTGTACTTATTTTGGTGAAGGACAGAATTTCCACAAATCCCATAATTTTTTAGCTTAAAATTGGGTGCTGCTTCTCTTATTCAAT ATGGCCGTTGCCCACCGCCACAAGTCACACCCCGATGTCAAGCTCTTCAGGCTCTGTCCCATTTGGCAATCTGGGAATACTCATTCCTCTTCCTCCTCCTCCACTCACAACCTTCACCATCCTACTCATCCCCCTAGCGACACAAACCTGAAAGCTTCCTCCTCTTCTAAGACCGTTTCCTCTGTCGCCAAGTCTCTCTTGCCTCCTCGACGCAGGCTCCGTCTTGATCCTAACAATTCTTTGTTCTTTCCTTATGAACCCGGGAAGCAGGTAAAGAGCGCCATCAGGATGAAGAATACAAGCAGATCCCATGTAGCTTTCAAGTTTCAAACGACAGCTCCGAAGAGCTGTTATATGCGGCCTCCTGGTGGCATTCTTGCTCCTGGAGAAAATTTTATTGCTACTGTCTTCAGATTTGTAGAGCATCCCGAGAACAATGAAAAGCCAATGGACCAGAAGAGCAAAATTAAGTTTAAGATCATGAGCCTTAAAGTGAAAGGAGGAACGGAATATGCACCTGAGCTGTTTGAAGAACAGAAGGACCAAGTCACTGTTGAGCGGATTTTGCGGGTTGTATTTGTAGATCCAGAGCGACCTAGTGCAGCTCTTGAAAAGCTGAAACGTCAATTGGCTGAAGCCGAGGCTGTACTTGAAGCGCGCAAGAAACCTCCAGTAGAAACAGGTCCTCAGGTTATAGGGGGTGAAGGGCTTGTGATAGATGAATGGAAAGAACGAAGGGAGAAATATCTTGCTCGTCAACAAGTGGGTGCTTTAGACTCTGTGTAA MAVAHRHKSHPDVKLFRLCPIWQSGNTHSSSSSSTHNLHHPTHPPSDTNLKASSSSKTVSSVAKSLLPPRRRLRLDPNNSLFFPYEPGKQVKSAIRMKNTSRSHVAFKFQTTAPKSCYMRPPGGILAPGENFIATVFRFVEHPENNEKPMDQKSKIKFKIMSLKVKGGTEYAPELFEEQKDQVTVERILRVVFVDPERPSAALEKLKRQLAEAEAVLEARKKPPVETGPQVIGGEGLVIDEWKERREKYLARQQVGALDSV* Homology
BLAST of CSPI03G41880 vs. ExPASy Swiss-Prot
Match: Q1ECE0 (Vesicle-associated protein 4-1 OS=Arabidopsis thaliana OX=3702 GN=PVA41 PE=2 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.3e-96 Identity = 180/250 (72.00%), Postives = 215/250 (86.00%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy Swiss-Prot
Match: Q8VYN2 (Vesicle-associated protein 4-2 OS=Arabidopsis thaliana OX=3702 GN=PVA42 PE=1 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 8.9e-86 Identity = 168/254 (66.14%), Postives = 200/254 (78.74%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy Swiss-Prot
Match: Q8LPQ7 (Vesicle-associated protein 4-3 OS=Arabidopsis thaliana OX=3702 GN=PVA43 PE=2 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 3.5e-74 Identity = 151/245 (61.63%), Postives = 190/245 (77.55%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07 Identity = 43/154 (27.92%), Postives = 74/154 (48.05%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06 Identity = 38/120 (31.67%), Postives = 55/120 (45.83%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy TrEMBL
Match: A0A0A0LFW4 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G851700 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy TrEMBL
Match: A0A5A7T1W8 (Vesicle-associated protein 4-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00390 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 9.8e-136 Identity = 251/262 (95.80%), Postives = 254/262 (96.95%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy TrEMBL
Match: A0A1S3BZ62 (vesicle-associated protein 4-1 OS=Cucumis melo OX=3656 GN=LOC103494990 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 9.8e-136 Identity = 251/262 (95.80%), Postives = 254/262 (96.95%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy TrEMBL
Match: A0A5D3BAA2 (Vesicle-associated protein 4-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001120 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135 Identity = 250/262 (95.42%), Postives = 254/262 (96.95%), Query Frame = 0
BLAST of CSPI03G41880 vs. ExPASy TrEMBL
Match: A0A6J1INV3 (vesicle-associated protein 4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111476917 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 5.2e-121 Identity = 228/267 (85.39%), Postives = 237/267 (88.76%), Query Frame = 0
BLAST of CSPI03G41880 vs. NCBI nr
Match: XP_011652378.1 (vesicle-associated protein 4-1 [Cucumis sativus] >KGN59869.1 hypothetical protein Csa_001849 [Cucumis sativus]) HSP 1 Score: 522.3 bits (1344), Expect = 2.4e-144 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CSPI03G41880 vs. NCBI nr
Match: XP_008454625.1 (PREDICTED: vesicle-associated protein 4-1 [Cucumis melo] >KAA0036758.1 vesicle-associated protein 4-1 [Cucumis melo var. makuwa]) HSP 1 Score: 492.7 bits (1267), Expect = 2.0e-135 Identity = 251/262 (95.80%), Postives = 254/262 (96.95%), Query Frame = 0
BLAST of CSPI03G41880 vs. NCBI nr
Match: TYJ95826.1 (vesicle-associated protein 4-1 [Cucumis melo var. makuwa]) HSP 1 Score: 491.5 bits (1264), Expect = 4.5e-135 Identity = 250/262 (95.42%), Postives = 254/262 (96.95%), Query Frame = 0
BLAST of CSPI03G41880 vs. NCBI nr
Match: XP_038900245.1 (vesicle-associated protein 4-1 [Benincasa hispida]) HSP 1 Score: 483.8 bits (1244), Expect = 9.4e-133 Identity = 244/267 (91.39%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of CSPI03G41880 vs. NCBI nr
Match: XP_022937296.1 (vesicle-associated protein 4-1-like [Cucurbita moschata]) HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-120 Identity = 228/267 (85.39%), Postives = 238/267 (89.14%), Query Frame = 0
BLAST of CSPI03G41880 vs. TAIR 10
Match: AT5G54110.1 (membrane-associated mannitol-induced ) HSP 1 Score: 352.4 bits (903), Expect = 3.0e-97 Identity = 180/250 (72.00%), Postives = 215/250 (86.00%), Query Frame = 0
BLAST of CSPI03G41880 vs. TAIR 10
Match: AT4G21450.1 (PapD-like superfamily protein ) HSP 1 Score: 318.2 bits (814), Expect = 6.4e-87 Identity = 168/254 (66.14%), Postives = 200/254 (78.74%), Query Frame = 0
BLAST of CSPI03G41880 vs. TAIR 10
Match: AT4G21450.3 (PapD-like superfamily protein ) HSP 1 Score: 304.7 bits (779), Expect = 7.3e-83 Identity = 167/273 (61.17%), Postives = 200/273 (73.26%), Query Frame = 0
BLAST of CSPI03G41880 vs. TAIR 10
Match: AT4G05060.1 (PapD-like superfamily protein ) HSP 1 Score: 279.6 bits (714), Expect = 2.5e-75 Identity = 151/245 (61.63%), Postives = 190/245 (77.55%), Query Frame = 0
BLAST of CSPI03G41880 vs. TAIR 10
Match: AT4G21450.2 (PapD-like superfamily protein ) HSP 1 Score: 198.4 bits (503), Expect = 7.3e-51 Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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