CSPI03G41220 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G41220
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEpidermal patterning factor-like protein
LocationChr3: 35326227 .. 35327495 (-)
RNA-Seq ExpressionCSPI03G41220
SyntenyCSPI03G41220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATGGTGAGTTGTCAAATGATTTGAGGTGGAGTGGAGTGGAGGGACTTTGCTTTGCTTTTGTTCAGAACTCTTTGATAAGAAATTGGAATCGATCACTTGTTTCTAACGCAAAATCTCCCTGCCAGTCTTAAAGCTAGACATTGGAAGAGTAAGAAACCAATTCAAACCAAACAAAATAAAACAATATATATATGTATGTATAAAGATAGAGAGAAAGGCTCTGACTTCTTGTACGGGGAAATGTGAATTTGCTTGTTAGGATTAAATTTCCACCACCTTCTTCTTATAACCCAAATCATTTTCCATTTTTTTTCATTCACCATCTCTTTCCCACCGTAATCATCATTATCATTTTGGCTTTTGAAGACATGAAAGGAACATACTGGTGTTTTATATTTATTCTGCAATTAGTCTGTTGGGTTTCTGCTGCAGCCAGGAATTTTGCTCCAAATCCTGCCCTCCCTCCTCATAAACAACAAGGTTCGTTTCTTACCAATATACTCACATCTTTTCTTTGGCTTTCTCATCTCAATTATTACATCTATTTAGCAATAGGTTTTCTTCTTCTTTCACTGCCTTTTTAATTCAAGTTGCTTGTTGTTTTGTTCCTGCCAGGTCTTATTGATTCAAAACAGGTCAGACCCCTACCCTTTTTGTCACTTTATTTGTGCTCTGTTTGTTGAAATAATTCATGTTTTTGGTCTGTATAAAGGCTGTTAAAGGTGTTAAAGAAGAAGAATTCTATAGAGGTATGAGGAAAATAGGGTCAAGTCCACCCAGCTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTGCCTACAACCACCAACAGGCGCAGCCACGTAGGGGTCCAATACACTAACTATGAACCCGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGATCCTAAGTCTTAAGAGGAAAAAATAAATATGATAGAATAAAAAGAATAACCTTCCTTTTTTTCCCATCATTTGCTTTGCCTTTTGCATCATTTCCATCCCACTGTATAGAAGTTCTTAATTCAAAGTTAATTTTTAATATGTATGAGGTTCAACGTTAGTTTAGAAAAGTAGATAATTAAGTTTCTATCAAAATATGGGGATCATAGAAGGTTAGACATAGGTGAGTTATGTTTATTGTAGCTAAGATTTTTTTCTTTTTTTGAATATTTTGTTTTATTAGGAAATTTGGCTCATATAATTTTTTTGTTGATGGAAAAGAATTCACTTGTTACCAC

mRNA sequence

CCATGGTGAGTTGTCAAATGATTTGAGGTGGAGTGGAGTGGAGGGACTTTGCTTTGCTTTTGTTCAGAACTCTTTGATAAGAAATTGGAATCGATCACTTGTTTCTAACGCAAAATCTCCCTGCCAGTCTTAAAGCTAGACATTGGAAGAGTAAGAAACCAATTCAAACCAAACAAAATAAAACAATATATATATGTATGTATAAAGATAGAGAGAAAGGCTCTGACTTCTTGTACGGGGAAATGTGAATTTGCTTGTTAGGATTAAATTTCCACCACCTTCTTCTTATAACCCAAATCATTTTCCATTTTTTTTCATTCACCATCTCTTTCCCACCGTAATCATCATTATCATTTTGGCTTTTGAAGACATGAAAGGAACATACTGGTGTTTTATATTTATTCTGCAATTAGTCTGTTGGGTTTCTGCTGCAGCCAGGAATTTTGCTCCAAATCCTGCCCTCCCTCCTCATAAACAACAAGGTCTTATTGATTCAAAACAGGCTGTTAAAGGTGTTAAAGAAGAAGAATTCTATAGAGGTATGAGGAAAATAGGGTCAAGTCCACCCAGCTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTGCCTACAACCACCAACAGGCGCAGCCACGTAGGGGTCCAATACACTAACTATGAACCCGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGATCCTAAGTCTTAAGAGGAAAAAATAAATATGATAGAATAAAAAGAATAACCTTCCTTTTTTTCCCATCATTTGCTTTGCCTTTTGCATCATTTCCATCCCACTGTATAGAAGTTCTTAATTCAAAGTTAATTTTTAATATGTATGAGGTTCAACGTTAGTTTAGAAAAGTAGATAATTAAGTTTCTATCAAAATATGGGGATCATAGAAGGTTAGACATAGGTGAGTTATGTTTATTGTAGCTAAGATTTTTTTCTTTTTTTGAATATTTTGTTTTATTAGGAAATTTGGCTCATATAATTTTTTTGTTGATGGAAAAGAATTCACTTGTTACCAC

Coding sequence (CDS)

ATGAAAGGAACATACTGGTGTTTTATATTTATTCTGCAATTAGTCTGTTGGGTTTCTGCTGCAGCCAGGAATTTTGCTCCAAATCCTGCCCTCCCTCCTCATAAACAACAAGGTCTTATTGATTCAAAACAGGCTGTTAAAGGTGTTAAAGAAGAAGAATTCTATAGAGGTATGAGGAAAATAGGGTCAAGTCCACCCAGCTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTGCCTACAACCACCAACAGGCGCAGCCACGTAGGGGTCCAATACACTAACTATGAACCCGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGA

Protein sequence

MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP*
Homology
[Close]
BLAST of CSPI03G41220 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.7e-16
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 0 

Query: 51  EEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCG 110
           +EE  +  R+IGS PPSCE KCYGC PCEAIQ PT ++   H+   Y NY+PEGW+C C 
Sbjct: 47  KEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISS-IPHLSPHYANYQPEGWRCHCP 106

Query: 111 P 112
           P
Sbjct: 107 P 106

[Close]
BLAST of CSPI03G41220 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-11
Identity = 31/76 (40.79%), Postives = 39/76 (51.32%), Query Frame = 0 

Query: 60  KIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGV-------------------QYTNY 117
           ++GS+PPSC ++C  C PC AIQVPT   R     V                   QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]
BLAST of CSPI03G41220 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 39/113 (34.51%), Postives = 47/113 (41.59%), Query Frame = 0 

Query: 24  NFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRKIGSSPPSCEH-KCYGCIPCEAIQ 83
           N  P P      + G  D K  ++G+           IGS PP CE  +C  C  CEAIQ
Sbjct: 27  NGRPEPDSVEFTKSGDQDVKMMMRGL-----------IGSRPPRCERVRCRSCGHCEAIQ 86

Query: 84  VPTTTNRRSHV-------------------GVQYTNYEPEGWKCKCGPSFYSP 117
           VPT    + H                    G   TNY+P  WKCKCG S Y+P
Sbjct: 87  VPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of CSPI03G41220 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-09
Identity = 30/68 (44.12%), Postives = 35/68 (51.47%), Query Frame = 0 

Query: 50  KEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYT-NYEPEGWKCK 109
           KE E  R +R +GSSPP C  KC  C PC+ + VP         G   T  Y PE W+CK
Sbjct: 95  KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPP------GTPVTAEYYPEAWRCK 154

Query: 110 CGPSFYSP 117
           CG   Y P
Sbjct: 155 CGNKLYMP 156

[Close]
BLAST of CSPI03G41220 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.1e-06
Identity = 22/55 (40.00%), Postives = 27/55 (49.09%), Query Frame = 0 

Query: 62  GSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 117
           GS PP C  KC  C PC+A+ VP          +    Y PE W+CKCG   + P
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVPIQPGL-----IMPLEYYPEAWRCKCGNKLFMP 107

[Close]
BLAST of CSPI03G41220 vs. ExPASy TrEMBL
Match: A0A1S3BIS6 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRK 60
           MKGTYWCFIFILQLVCWVSAAAR FAPNPAL PHK QGLI+SKQAVKG+KEEEFYRGMRK
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHK-QGLIESKQAVKGIKEEEFYRGMRK 60

Query: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 117
           IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSH+GVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115

[Close]
BLAST of CSPI03G41220 vs. ExPASy TrEMBL
Match: A0A5D3BVF6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00550 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRK 60
           MKGTYWCFIFILQLVCWVSAAAR FAPNPAL PHK QGLI+SKQAVKG+KEEEFYRGMRK
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHK-QGLIESKQAVKGIKEEEFYRGMRK 60

Query: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 117
           IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSH+GVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115

[Close]
BLAST of CSPI03G41220 vs. ExPASy TrEMBL
Match: A0A6J1IUG9 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480029 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42
Identity = 92/122 (75.41%), Postives = 95/122 (77.87%), Query Frame = 0 

Query: 1   MKGTY---WCFIFILQLVCWVSAAARNFAPNPALPPHKQQGL-IDSKQAVKG--VKEEEF 60
           MKGTY    CFI  LQL CWVSAA   F    AL PHKQQG   DS +AV+   VKE E 
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGVVKEGEV 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFY 117
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSHVG+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCSPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 117

[Close]
BLAST of CSPI03G41220 vs. ExPASy TrEMBL
Match: A0A6J1GTM4 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457464 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-41
Identity = 91/122 (74.59%), Postives = 94/122 (77.05%), Query Frame = 0 

Query: 1   MKGTY---WCFIFILQLVCWVSAAARNFAPNPALPPHKQQGL-IDSKQAVKG--VKEEEF 60
           MKGTY    CFI  LQL CWVSAA   F    AL PHKQQG   DS +AV+   VK  E 
Sbjct: 1   MKGTYRCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGVVKGGEV 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFY 117
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSHVG+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 117

[Close]
BLAST of CSPI03G41220 vs. ExPASy TrEMBL
Match: A0A6J1KCN6 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492675 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.0e-40
Identity = 85/132 (64.39%), Postives = 93/132 (70.45%), Query Frame = 0 

Query: 1   MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLI--------DSKQAVKGVKEE 60
           MKGTY+CF+FIL L CWVSA     APN  L PHKQQ L+        +SKQ V GV EE
Sbjct: 1   MKGTYYCFMFILHLACWVSAKTTALAPNHPLLPHKQQRLLPALVSASSNSKQGVGGVNEE 60

Query: 61  E-FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTN-------RRSHVGVQYTNYEPEG 117
           E  YRGMR +GS  P CEHKCYGC PCEAI+VPT  N       RR+HVGVQYTNYEPEG
Sbjct: 61  EMLYRGMRGMGSGRPRCEHKCYGCSPCEAIEVPTNNNNSKNNNKRRTHVGVQYTNYEPEG 120

[Close]
BLAST of CSPI03G41220 vs. NCBI nr
Match: XP_004146810.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652342.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >KAE8651286.1 hypothetical protein Csa_001818 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 7.5e-66
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRK 60
           MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRK
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRK 60

Query: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 117
           IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 116

[Close]
BLAST of CSPI03G41220 vs. NCBI nr
Match: XP_008447616.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_008447617.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_008447618.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >KAA0036717.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo var. makuwa] >TYK03693.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 2.5e-61
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRK 60
           MKGTYWCFIFILQLVCWVSAAAR FAPNPAL PHK QGLI+SKQAVKG+KEEEFYRGMRK
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPNPALLPHK-QGLIESKQAVKGIKEEEFYRGMRK 60

Query: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 117
           IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSH+GVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  IGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115

[Close]
BLAST of CSPI03G41220 vs. NCBI nr
Match: XP_038904354.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 104/120 (86.67%), Postives = 105/120 (87.50%), Query Frame = 0 

Query: 1   MKGTYWCFIFILQLVCWVSAAARNFAPNPALPPHKQQGLI----DSKQAVKGVKEEEFYR 60
           MK TYWCFI ILQL CWVSAAAR FAPN AL PHKQQGLI    DSK+A KGV EE FYR
Sbjct: 1   MKRTYWCFILILQLACWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAGKGVNEEAFYR 60

Query: 61  GMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 117
           GMRKIGSSPPSCEHKCYGCIPCEAIQVPT TNR SHVGVQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  GMRKIGSSPPSCEHKCYGCIPCEAIQVPTATNRHSHVGVQYTNYEPEGWKCKCGPSFYSP 120

[Close]
BLAST of CSPI03G41220 vs. NCBI nr
Match: XP_023526549.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.6 bits (462), Expect = 2.0e-42
Identity = 92/122 (75.41%), Postives = 96/122 (78.69%), Query Frame = 0 

Query: 1   MKGTY---WCFIFILQLVCWVSAAARNFAPNPALPPHKQQGL-IDSKQAVKG--VKEEEF 60
           MKGTY    CFI  LQL CWVSAA   F    AL PHKQQG  +DS +AV+   VKE E 
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNVDSVKAVEEGVVKEGEV 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFY 117
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSHVG+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 117

[Close]
BLAST of CSPI03G41220 vs. NCBI nr
Match: XP_022980756.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 5.8e-42
Identity = 92/122 (75.41%), Postives = 95/122 (77.87%), Query Frame = 0 

Query: 1   MKGTY---WCFIFILQLVCWVSAAARNFAPNPALPPHKQQGL-IDSKQAVKG--VKEEEF 60
           MKGTY    CFI  LQL CWVSAA   F    AL PHKQQG   DS +AV+   VKE E 
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGVVKEGEV 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFY 117
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSHVG+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCSPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 117

[Close]
BLAST of CSPI03G41220 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 85.1 bits (209), Expect = 4.0e-17
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 0 

Query: 51  EEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCG 110
           +EE  +  R+IGS PPSCE KCYGC PCEAIQ PT ++   H+   Y NY+PEGW+C C 
Sbjct: 47  KEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISS-IPHLSPHYANYQPEGWRCHCP 106

Query: 111 P 112
           P
Sbjct: 107 P 106

[Close]
BLAST of CSPI03G41220 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 3.9e-12
Identity = 31/76 (40.79%), Postives = 39/76 (51.32%), Query Frame = 0 

Query: 60  KIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGV-------------------QYTNY 117
           ++GS+PPSC ++C  C PC AIQVPT   R     V                   QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]
BLAST of CSPI03G41220 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10
Identity = 39/113 (34.51%), Postives = 47/113 (41.59%), Query Frame = 0 

Query: 24  NFAPNPALPPHKQQGLIDSKQAVKGVKEEEFYRGMRKIGSSPPSCEH-KCYGCIPCEAIQ 83
           N  P P      + G  D K  ++G+           IGS PP CE  +C  C  CEAIQ
Sbjct: 27  NGRPEPDSVEFTKSGDQDVKMMMRGL-----------IGSRPPRCERVRCRSCGHCEAIQ 86

Query: 84  VPTTTNRRSHV-------------------GVQYTNYEPEGWKCKCGPSFYSP 117
           VPT    + H                    G   TNY+P  WKCKCG S Y+P
Sbjct: 87  VPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of CSPI03G41220 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10
Identity = 30/68 (44.12%), Postives = 35/68 (51.47%), Query Frame = 0 

Query: 50  KEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYT-NYEPEGWKCK 109
           KE E  R +R +GSSPP C  KC  C PC+ + VP         G   T  Y PE W+CK
Sbjct: 169 KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPP------GTPVTAEYYPEAWRCK 228

Query: 110 CGPSFYSP 117
           CG   Y P
Sbjct: 229 CGNKLYMP 230

[Close]
BLAST of CSPI03G41220 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10
Identity = 30/68 (44.12%), Postives = 35/68 (51.47%), Query Frame = 0 

Query: 50  KEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYT-NYEPEGWKCK 109
           KE E  R +R +GSSPP C  KC  C PC+ + VP         G   T  Y PE W+CK
Sbjct: 95  KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPP------GTPVTAEYYPEAWRCK 154

Query: 110 CGPSFYSP 117
           CG   Y P
Sbjct: 155 CGNKLYMP 156

The following BLAST results are available for this feature:
BLAST of CSPI03G41220 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
C4B8C45.7e-1657.38EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LFT55.5e-1140.79EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9T0681.8e-0934.51EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q1PEY62.3e-0944.12EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LUH94.1e-0640.00EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of CSPI03G41220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BIS61.2e-6194.83Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030... [more]
A0A5D3BVF61.2e-6194.83Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1IUG92.8e-4275.41Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1GTM41.4e-4174.59Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1KCN62.0e-4064.39Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
BLAST of CSPI03G41220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146810.17.5e-66100.00EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPI... [more]
XP_008447616.12.5e-6194.83PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_0084476... [more]
XP_038904354.11.6e-5586.67EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida][more]
XP_023526549.12.0e-4275.41EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo][more]
XP_022980756.15.8e-4275.41EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima][more]
BLAST of CSPI03G41220 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13898.14.0e-1757.38unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT5G10310.13.9e-1240.79unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G37810.11.3e-1034.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G30370.11.6e-1044.12allergen-related [more]
AT2G30370.21.6e-1044.12allergen-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 60..116
e-value: 4.6E-21
score: 74.5
NoneNo IPR availablePANTHERPTHR33109:SF14EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3coord: 1..116
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G41220.1CSPI03G41220.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region